Histone H3.1
UniProt P68431 · gene H3C1 · Homo sapiens · 136 residues
708evidence items
0mapped to a state
0states
8techniques
5sources
0conflicts
Coverage grid
Mapped evidence per state and technique. Shaded rows rest on a single technique. Badge = best data level in the cell: raw (traces, images, FIDs: can be re-analysed), proc (maps, curves, tables, trajectories) or rep (values in the paper only).
| State | Basis | xray | cryoem | nmr_structure | nmr_shifts | saxs_sans | force_spectroscopy | integrative | af_prediction | Total |
|---|---|---|---|---|---|---|---|---|---|---|
| No states defined yet. | ||||||||||
Unmapped evidence: 708 of 708 items. Mappings come from curator assignments and curated rules; see About for how rules work.
Sources
| Source | Evidence | Mapped |
|---|---|---|
| AlphaFold DB | 1 | 0 |
| BMRB | 11 | 0 |
| RCSB PDB | 586 | 0 |
| SASBDB | 2 | 0 |
| SMASH-BIO | 108 | 0 |
Structure
No state models are exported for this protein yet. Observed states export the representative PDB entry; inferred states need fitted models, not yet built.
States and transitions
No states defined.
| State | Basis | Parent | Description |
|---|
No transitions recorded in this version (no rate or free-energy evidence has been curated yet).
Evidence
One row per deposit or experiment. Filter by technique, environment or text. Unmapped evidence is listed too.
| Evidence | Technique | Observable | Conditions | Mapped to state |
|---|---|---|---|---|
| EV-PDB-11AF-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of JADE3 PZP domain in complex with Histone H3 · Histone H3.1,Protein Jade-3 (chains A,B) | unmapped |
| EV-PDB-1O9S-2 RCSB PDB | xray | resolution: 1.75 Å | in vitro · -173.15 °C · pH 7.8 · ligands SAH Crystal structure of a ternary complex of the human histone methyltransferase SET7/9 · GENE FRAGMENT FOR HISTONE H3 (chains K,L) | unmapped |
| EV-PDB-1Q3L-2 RCSB PDB | xray | resolution: 1.64 Å | in vitro · -173.15 °C · pH 6.1 Chromodomain Of HP1 Complexed With Histone H3 Tail Containing monomethyllysine 9. · Histone H3 (chains P) | unmapped |
| EV-PDB-21ME-5 RCSB PDB | cryoem | resolution: 3.58 Å | in vitro Cryo-EM structure of heterotypic CENP-A/H3 nucleosome isolated from human cells · Histone H3.1 (chains E) | unmapped |
| EV-PDB-2B2T-3 RCSB PDB | xray | resolution: 2.45 Å | in vitro · -173.15 °C · pH 8 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and phosphothreonine 3 · Histone H3 tail (chains D) | unmapped |
| EV-PDB-2B2U-3 RCSB PDB | xray | resolution: 2.95 Å | in vitro · -173.15 °C · pH 8 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2 · Histone H3 (chains D) | unmapped |
| EV-PDB-2B2V-3 RCSB PDB | xray | resolution: 2.65 Å | in vitro · -173.15 °C · pH 8 Crystal structure analysis of human CHD1 chromodomains 1 and 2 bound to histone H3 resi 1-15 MeK4 · Histone H3 (chains D) | unmapped |
| EV-PDB-2B2W-3 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 8 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 · Histone H3 (chains D) | unmapped |
| EV-PDB-2C1N-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 7 Molecular basis for the recognition of phosphorylated and phosphoacetylated histone H3 by 14-3-3 · HISTONE H3 ACETYLPHOSPHOPEPTIDE (chains C,E) | unmapped |
| EV-PDB-2CO0-2 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -173.15 °C WDR5 and unmodified Histone H3 complex at 2.25 Angstrom · HISTONE H3 DIMETHYL-LYSINE 4 (chains B,D) | unmapped |
| EV-PDB-2CV5-2 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · ligands CL, MN Crystal structure of human nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-2FSA-2 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · pH 7.5 · ligands ZN Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the H3(1-15)K4ME2 bound state · Histone H3(1-15)K4me2 peptide (chains P) | unmapped |
| EV-PDB-2KWK-1 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 6.5 · ligands ZN Solution structures of the double PHD fingers of human transcriptional protein DPF3b bound to a H3 peptide wild type · Histone peptide (chains B) | unmapped |
| EV-PDB-2L75-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7 · ligands ZN Solution structure of CHD4-PHD2 in complex with H3K9me3 · 14-meric peptide from 1Histone H3.1 (chains B) | unmapped |
| EV-PDB-2LBM-2 RCSB PDB | nmr_structure | structure | in vitro · 26.85 °C · pH 7 · ligands ZN Solution structure of the ADD domain of ATRX complexed with histone tail H3 1-15 K9me3 · histone tail H3 K9me3 (chains C) | unmapped |
| EV-PDB-2M0O-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7 The solution structure of human PHF1 in complex with H3K36me3 · H3K36me3 peptide (chains B) | unmapped |
| EV-PDB-2NDF-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7.4 Solution NMR structures of AF9 yeats domain in complex with histon H3 acetylation at K18 · Histone H3 peptide (chains B) | unmapped |
| EV-PDB-2NDG-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7.4 Solution NMR structures of AF9 yeats domain in complex with histone H3 crotonylation at K18 · Histone H3 peptide (chains B) | unmapped |
| EV-PDB-2OQ6-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 5.5 · ligands NI, OGA, ZN Crystal structure of JMJD2A complexed with histone H3 peptide trimethylated at Lys9 · synthetic peptide (chains C,D) | unmapped |
| EV-PDB-2OT7-2 RCSB PDB | xray | resolution: 2.135 Å | in vitro · -173.15 °C · pH 5.5 · ligands NI, OGA, ZN Crystal structure of JMJD2A complexed with histone H3 peptide monomethylated at Lys9 · histone 3 K9 monomethyl (chains C,D) | unmapped |
| EV-PDB-2OX0-2 RCSB PDB | xray | resolution: 1.95 Å | in vitro · -173.15 °C · pH 5.5 · ligands CL, NI, OGA, ZN Crystal structure of JMJD2A complexed with histone H3 peptide dimethylated at Lys9 · synthetic peptide (chains C,D) | unmapped |
| EV-PDB-2RI7-2 RCSB PDB | xray | resolution: 1.45 Å | in vitro · -173.15 °C · pH 7.5 · ligands GOL, IPA, ZN Crystal structure of PHD finger-linker-bromodomain Y17E mutant from human BPTF in the H3(1-9)K4ME2 bound state · histone H3.1 (chains P) | unmapped |
| EV-PDB-2RR4-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7 · ligands ZN Complex structure of the zf-CW domain and the H3K4me3 peptide · Histone H3 (chains B) | unmapped |
| EV-PDB-2UXN-3 RCSB PDB | xray | resolution: 2.72 Å | in vitro · -173.15 °C · pH 5.6 · ligands CL, FDA, GOL Structural Basis of Histone Demethylation by LSD1 Revealed by Suicide Inactivation · HISTONE H3.1 (chains E) | unmapped |
| EV-PDB-2V83-2 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -178.15 °C · ligands ZN Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide · HISTONE H3 (chains D,E) | unmapped |
| EV-PDB-2V85-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -178.15 °C · ligands ZN Crystal structure of RAG2-PHD finger in complex with H3R2me1K4me3 peptide · H3R2ME1K4ME3 PEPTIDE (chains D,E) | unmapped |
| EV-PDB-2V88-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of RAG2-PHD finger in complex with H3R2me2sK4me2 peptide · H3R2ME2SK4ME3 PEPTIDE (chains D,F) | unmapped |
| EV-PDB-2V89-2 RCSB PDB | xray | resolution: 1.1 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide at 1.1A resolution · HISTONE H3 (chains D,E) | unmapped |
| EV-PDB-2VNF-2 RCSB PDB | xray | resolution: 1.76 Å | in vitro · -173.15 °C · ligands DTT, DTU, NA, ZN MOLECULAR BASIS OF HISTONE H3K4ME3 RECOGNITION BY ING4 · HISTONE H3 (chains B,D) | unmapped |
| EV-PDB-3AFA-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN The human nucleosome structure · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3ASL-2 RCSB PDB | xray | resolution: 1.41 Å | in vitro · -173.15 °C · ligands EDO, ZN Structure of UHRF1 in complex with histone tail · Histone H3.3 (chains B) | unmapped |
| EV-PDB-3AYW-1 RCSB PDB | xray | resolution: 2.9 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H3K56Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZE-1 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H3K64Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZF-1 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H3K79Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZG-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H3K115Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZH-1 RCSB PDB | xray | resolution: 3.49 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H3K122Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZI-1 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H4K31Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZJ-1 RCSB PDB | xray | resolution: 2.89 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H4K44Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZK-1 RCSB PDB | xray | resolution: 3.2 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H4K59Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AVR-2 RCSB PDB | xray | resolution: 1.803 Å | in vitro · -173.15 °C · pH 8.5 · ligands CL, EDO, NI, OGA, ZN Catalytic fragment of UTX/KDM6A bound with histone H3K27me3 peptide, N-oxyalylglycine, and Ni(II) · Histone H3 (chains B) | unmapped |
| EV-PDB-3A1B-1 RCSB PDB | xray | resolution: 2.292 Å | in vitro · -173.15 °C · pH 5.5 · ligands EDO, ZN Crystal structure of the DNMT3A ADD domain in complex with histone H3 · DNA (cytosine-5)-methyltransferase 3A, Histone H3.1 (chains A) | unmapped |
| EV-PDB-2X0L-3 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · ligands FAD Crystal structure of a neuro-specific splicing variant of human histone lysine demethylase LSD1. · HISTONE H3 PEPTIDE (chains C) | unmapped |
| EV-PDB-2VPG-3 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · ligands GOL, ZN Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex · HISTONE H3 TAIL (chains P,R) | unmapped |
| EV-PDB-2LGG-2 RCSB PDB | nmr_structure | structure | in vitro · 19.85 °C · pH 7.4 · ligands ZN Structure of PHD domain of UHRF1 in complex with H3 peptide · histone H3 peptide (chains B) | unmapped |
| EV-PDB-2KWJ-1 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 6.5 · ligands ZN Solution structures of the double PHD fingers of human transcriptional protein DPF3 bound to a histone peptide containing acetylation at lysine 14 · Histone peptide (chains B) | unmapped |
| EV-PDB-2CNX-2 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C WDR5 and Histone H3 Lysine 4 dimethyl complex at 2.1 angstrom · HISTONE H3 DIMETHYL-LYSINE 4 (chains P) | unmapped |
| EV-PDB-2C1J-2 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 7 Molecular basis for the recognition of phosphorylated and phosphoacetylated histone H3 by 14-3-3 · HISTONE H3 ACETYLPHOSPHOPEPTIDE (chains C,D) | unmapped |
| EV-PDB-1PEG-2 RCSB PDB | xray | resolution: 2.59 Å | in vitro · -173.15 °C · pH 8.4 · ligands SAH, ZN Structural basis for the product specificity of histone lysine methyltransferases · Histone H3 (chains P,Q) | unmapped |
| EV-PDB-1CT6-1 RCSB PDB | nmr_structure | structure | in vitro · 3.85 °C · pH 7 SOLUTION STRUCTURE OF CGGIRGERG IN CONTACT WITH THE MONOCLONAL ANTIBODY MAB 4X11, NMR, 11 STRUCTURES · HISTONE H3 PEPTIDE (chains A) | unmapped |
| EV-PDB-1CS9-1 RCSB PDB | nmr_structure | structure | in vitro · 3.85 °C · pH 7 SOLUTION STRUCTURE OF CGGIRGERA IN CONTACT WITH THE MONOCLONAL ANTIBODY MAB 4X11, NMR, 7 STRUCTURES · HISTONE H3 PEPTIDE (chains A) | unmapped |
| EV-PDB-3AZM-1 RCSB PDB | xray | resolution: 2.89 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H4K79Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3AZN-1 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H4K91Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3B95-2 RCSB PDB | xray | resolution: 2.99 Å | in vitro · -173.15 °C · pH 8.5 · ligands SO4 EuHMT1 (Glp) Ankyrin Repeat Domain (Structure 2) · Histone H3 N-terminal Peptide (chains P) | unmapped |
| EV-PDB-3FDT-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -73.15 °C · pH 8.5 Crystal structure of the complex of human chromobox homolog 5 (CBX5) with H3K9(me)3 peptide · H3K9(me)3 peptide (chains T) | unmapped |
| EV-PDB-3KMT-2 RCSB PDB | xray | resolution: 1.78 Å | in vitro · -113.15 °C · pH 6.3 · ligands SAH Crystal structure of vSET/SAH/H3 ternary complex · Histone H3 (chains G,H,I) | unmapped |
| EV-PDB-3LQI-2 RCSB PDB | xray | resolution: 1.92 Å | in vitro · -76.15 °C · pH 5.5 · ligands ZN Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me2 peptide · Histone H3 (chains R,S,T) | unmapped |
| EV-PDB-3LQJ-2 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -76.15 °C · pH 8.5 · ligands ZN Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me3 peptide · Histone H3 (chains Q,T) | unmapped |
| EV-PDB-3O34-2 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -76.15 °C · pH 5.6 · ligands BTN, ZN Crystal structure of TRIM24 PHD-Bromo complexed with H3(13-32)K23ac peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-3O37-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -76.15 °C · pH 7.5 · ligands ZN Crystal structure of TRIM24 PHD-Bromo complexed with H3(1-10)K4 peptide · Histone H3.1 (chains E,F,G,H) | unmapped |
| EV-PDB-3QO2-2 RCSB PDB | xray | resolution: 2.49 Å | in vitro · -173.15 °C · pH 7.5 · ligands EDO Structural insights for MPP8 chromodomain interaction with histone H3 lysine 9 · Histone H3 peptide (chains P,Q,R,S) | unmapped |
| EV-PDB-3RIG-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 9.5 · ligands NHE, ZN Sirt5 is an NAD-dependent protein lysine demalonylase and desuccinylase · peptide of histone 3 thioacetyl-lysine 9 (chains C,D) | unmapped |
| EV-PDB-3RIY-2 RCSB PDB | xray | resolution: 1.55 Å | in vitro · -173.15 °C · ligands NAD, ZN Sirt5 is an NAD-dependent protein lysine demalonylase and desuccinylase · peptide of histone 3 N-succinyl lysine 9 (chains C,D) | unmapped |
| EV-PDB-3SOU-2 RCSB PDB | xray | resolution: 1.8001 Å | in vitro · -173.15 °C · pH 6.5 · ligands ZN Structure of UHRF1 PHD finger in complex with histone H3 1-9 peptide · Histone H3 (chains D,E) | unmapped |
| EV-PDB-3U3D-2 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · ligands GOL, ZN Plasmodium falciparum Sir2A preferentially hydrolyzes medium and long chain fatty acyl lysine · histone 3 myristoyl lysine 9 peptide (chains B) | unmapped |
| EV-PDB-3U5O-2 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -76.15 °C · ligands ZN Crystal structure of the complex of TRIM33 PHD-Bromo and H3(1-22)K9me3K14acK18ac histone peptide · Histone H3.1 (chains I,J,K,L,M,N,O,P) | unmapped |
| EV-PDB-3U5P-2 RCSB PDB | xray | resolution: 2.8 Å | in vitro · -76.15 °C · pH 8 · ligands ZN Crystal structure of the complex of TRIM33 PHD-Bromo and H3(1-28)K9me3K14acK18acK23ac histone peptide · Histone H3.1 (chains I,J,K,L,M,N,O,P) | unmapped |
| EV-PDB-3UEE-2 RCSB PDB | xray | resolution: 2.61 Å | in vitro · -173.15 °C · pH 7 · ligands ZN Crystal structure of human Survivin K62A mutant bound to N-terminal histone H3 · N-terminal fragment of histone H3 (chains B,D) | unmapped |
| EV-PDB-3UEF-2 RCSB PDB | xray | resolution: 2.45 Å | in vitro · -173.15 °C · pH 7.5 · ligands EDO, ZN Crystal structure of human Survivin bound to histone H3 (C2 space group). · N-terminal fragment of histone H3 (chains B,D) | unmapped |
| EV-PDB-3W97-1 RCSB PDB | xray | resolution: 3.2 Å | in vitro · -173.15 °C · pH 6 · ligands MN Crystal Structure of Human Nucleosome Core Particle lacking H2B N-terminal region · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3W98-1 RCSB PDB | xray | resolution: 3.42 Å | in vitro · -173.15 °C · pH 6 · ligands MN Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3W99-1 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · pH 6 · ligands MN Crystal Structure of Human Nucleosome Core Particle lacking H4 N-terminal region · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3WA9-1 RCSB PDB | xray | resolution: 3.07 Å | in vitro · -173.15 °C · pH 6 The nucleosome containing human H2A.Z.1 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3WAA-1 RCSB PDB | xray | resolution: 3.2 Å | in vitro · -173.15 °C · pH 6 The nucleosome containing human H2A.Z.2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3WKJ-1 RCSB PDB | xray | resolution: 2.8 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN The nucleosome containing human TSH2B · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3X1S-1 RCSB PDB | xray | resolution: 2.805 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of the nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3X1V-2 RCSB PDB | xray | resolution: 2.921 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of nucleosome core particle in the presence of histone variant involved in reprogramming · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3ZG6-2 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · ligands APR, GOL, ZN The novel de-long chain fatty acid function of human sirt6 · PEPTIDE (chains F) | unmapped |
| EV-PDB-43IE-1 RCSB PDB | cryoem | resolution: 3.41 Å | in vitro Cryo-EM structure of canonical human nucleosome in the presence of 1 mM magnesium chloride · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-4A0J-2 RCSB PDB | xray | resolution: 2.803 Å | in vitro · -173.15 °C · pH 6 · ligands ZN Crystal structure of Survivin bound to the phosphorylated N-terminal tail of histone H3 · HISTONE H3 PEPTIDE (chains C,D) | unmapped |
| EV-PDB-4A7J-2 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · pH 7.5 Symmetric Dimethylation of H3 Arginine 2 is a Novel Histone Mark that Supports Euchromatin Maintenance · HISTONE H3.1T (chains B) | unmapped |
| EV-PDB-4BD3-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7 Phf19 links methylated lysine 36 of histone H3 to regulation of Polycomb activity · HISTONE H3 (chains B) | unmapped |
| EV-PDB-4C1Q-2 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 5.5 · ligands GOL, SAH, ZN Crystal structure of the PRDM9 SET domain in complex with H3K4me2 and AdoHcy. · HISTONE H3.1 (chains C) | unmapped |
| EV-PDB-4A0N-2 RCSB PDB | xray | resolution: 2.743 Å | in vitro · -173.15 °C · pH 8.5 · ligands ZN Crystal structure of Survivin bound to the phosphorylated N-terminal tail of histone H3 · HISTONE H3 PEPTIDE (chains C) | unmapped |
| EV-PDB-43IB-1 RCSB PDB | cryoem | resolution: 2.84 Å | in vitro Cryo-EM structure of canonical human nucleosome. · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3ZVY-2 RCSB PDB | xray | resolution: 1.95 Å | in vitro · -163.15 °C · ligands CL, TRS, ZN PHD finger of human UHRF1 in complex with unmodified histone H3 N- terminal tail · HISTONE H3.1 (chains C,D) | unmapped |
| EV-PDB-3X1U-2 RCSB PDB | xray | resolution: 3.25 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of nucleosome core particle in the presence of histone variants involved in reprogramming · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3X1T-2 RCSB PDB | xray | resolution: 2.808 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of nucleosome core particle consisting of mouse testis specific histone variants H2aa and H2ba · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3W96-1 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-3V43-2 RCSB PDB | xray | resolution: 1.47 Å | in vitro · -173.15 °C · pH 5.6 · ligands ACT, ZN Crystal structure of MOZ · Histone H3.1 (chains Q) | unmapped |
| EV-PDB-3UIK-2 RCSB PDB | xray | resolution: 2.701 Å | in vitro · -173.15 °C · pH 7 · ligands ZN crystal structure of human Survivin mutant K62Y/H80W in complex with H3(1-10) peptide · histone H3(1-10) peptide (chains P,Q) | unmapped |
| EV-PDB-3UII-2 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 7 · ligands ZN crystal structure of human Survivin in complex with H3(1-10) peptide · histone H3(1-10) peptide (chains P,Q) | unmapped |
| EV-PDB-3UIG-2 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 7 · ligands ZN crystal structure of human Survivin in complex with T3 phosphorylated H3(1-15) peptide · T3 phosphorylated H3(1-15) peptide (chains P,Q) | unmapped |
| EV-PDB-3U5N-2 RCSB PDB | xray | resolution: 1.95 Å | in vitro · -76.15 °C · ligands ZN Crystal structure of the complex of TRIM33 PHD-Bromo and H3(1-20)K9me3K14ac histone peptide · Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-3U4S-2 RCSB PDB | xray | resolution: 2.15 Å | in vitro · -173.15 °C · pH 5.5 · ligands 08P, NI, ZN Histone Lysine demethylase JMJD2A in complex with T11C peptide substrate crosslinked to N-oxalyl-D-cysteine · HISTONE 3 TAIL ANALOG (T11C Peptide) (chains C,D) | unmapped |
| EV-PDB-3U31-2 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · ligands GOL, NAD, ZN Plasmodium falciparum Sir2A preferentially hydrolyzes medium and long chain fatty acyl lysine · histone 3 myristoyl lysine 9 peptide (chains B) | unmapped |
| EV-PDB-3SOW-2 RCSB PDB | xray | resolution: 1.9501 Å | in vitro · -173.15 °C · pH 6.5 · ligands ZN Structure of UHRF1 PHD finger in complex with histone H3K4me3 1-9 peptide · Histone H3 (chains C,D) | unmapped |
| EV-PDB-3QJ6-2 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · ligands SO4, UNX The crystal structure of PWWP domain of human Hepatoma-derived growth factor 2 in complex with H3K79me3 peptide · H3K79me3 (chains T) | unmapped |
| EV-PDB-3O35-2 RCSB PDB | xray | resolution: 1.76 Å | in vitro · -76.15 °C · pH 8 · ligands ZN Crystal structure of TRIM24 PHD-Bromo complexed with H3(23-31)K27ac peptide · Histone H3.1 (chains D,E) | unmapped |
| EV-PDB-3KQI-2 RCSB PDB | xray | resolution: 1.78 Å | in vitro · -73.15 °C · pH 6 · ligands CL, GOL, MG, ZN crystal structure of PHF2 PHD domain complexed with H3K4Me3 peptide · H3K4Me3 peptide (chains B) | unmapped |
| EV-PDB-3AZL-1 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of Human Nucleosome Core Particle Containing H4K77Q mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-4EZH-2 RCSB PDB | xray | resolution: 2.52 Å | in vitro · -173.15 °C · pH 8.2 · ligands NI, OGA, ZN the crystal structure of KDM6B bound with H3K27me3 peptide · SYNTHESIZED methylation peptide (chains C,D) | unmapped |
| EV-PDB-4F4U-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 8.5 · ligands ZN The bicyclic intermediate structure provides insights into the desuccinylation mechanism of SIRT5 · peptide from Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-4F56-2 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -173.15 °C · pH 8.5 · ligands CGK, ZN The bicyclic intermediate structure provides insights into the desuccinylation mechanism of SIRT5 · peptide from Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-4FT2-2 RCSB PDB | xray | resolution: 3.2 Å | in vitro · -173.15 °C · pH 8 · ligands SAH crystal structure of Zea mays ZMET2 in complex H3(1-15)K9me2 peptide and SAH · H3 peptide (chains P) | unmapped |
| EV-PDB-4FWF-2 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -143.15 °C · pH 7 · ligands FAD, ZN Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic · Histone H3.1 (chains E) | unmapped |
| EV-PDB-4HON-2 RCSB PDB | xray | resolution: 1.799 Å | in vitro · ligands AKG, NI, NO3, PDO, SCN, ZN Crystal structure of human JMJD2D/KDM4D in complex with an H3K9me3 peptide and 2-oxoglutarate · Histone H3 Peptide (chains F,G) | unmapped |
| EV-PDB-4I51-2 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · pH 7.5 · ligands GOL, SAH, UNX, ZN Methyltransferase domain of HUMAN EUCHROMATIC HISTONE METHYLTRANSFERASE 1, mutant Y1211A · H3K9 NE-ALLYL PEPTIDE (chains C,D) | unmapped |
| EV-PDB-4L7X-2 RCSB PDB | xray | resolution: 1.35 Å | in vitro · -173.15 °C · pH 8 · ligands ZN Crystal structure of the DIDO PHD finger in complex with H3K4me3 · Histone H3 peptide (chains U) | unmapped |
| EV-PDB-4LK9-2 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · pH 7.5 · ligands ZN Crystal Structure of MOZ double PHD finger histone H3 tail complex · Histone H3.1 (chains B) | unmapped |
| EV-PDB-4LKA-2 RCSB PDB | xray | resolution: 1.61 Å | in vitro · -173.15 °C · pH 7.5 · ligands ZN Crystal Structure of MOZ double PHD finger histone H3K9ac complex · Histone H3.1 (chains B) | unmapped |
| EV-PDB-4LLB-2 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 8.5 · ligands ZN Crystal Structure of MOZ double PHD finger histone H3K14ac complex · Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-4LXL-2 RCSB PDB | xray | resolution: 1.87 Å | in vitro · -173.15 °C · pH 6.5 · ligands NI, PD2, ZN Crystal structure of JMJD2B complexed with pyridine-2,4-dicarboxylic acid and H3K9me3 · H3 peptide (chains D) | unmapped |
| EV-PDB-4QBQ-2 RCSB PDB | xray | resolution: 2.406 Å | in vitro · -173.15 °C · pH 6.5 · ligands ZN Crystal structure of DNMT3a ADD domain bound to H3 peptide · Histone H3 (chains P) | unmapped |
| EV-PDB-4QBR-2 RCSB PDB | xray | resolution: 1.902 Å | in vitro · -173.15 °C · pH 5.5 · ligands ZN Crystal structure of DNMT3a ADD domain G550D mutant bound to H3 peptide · Histone H3 (chains E,P) | unmapped |
| EV-PDB-4QBS-2 RCSB PDB | xray | resolution: 1.8 Å | in vitro · -173.15 °C · pH 6.5 · ligands SO4, ZN Crystal structure of DNMT3a ADD domain E545R mutant bound to H3T3ph peptide · Histone H3 (chains P) | unmapped |
| EV-PDB-4TN7-3 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · ligands FE, NO, SIN Crystal structure of mouse KDM2A-H3K36ME-NO complex · Peptide (chains E,F) | unmapped |
| EV-PDB-4U68-2 RCSB PDB | xray | resolution: 1.8 Å | in vitro · -173.15 °C · pH 4.5 Crystal structure of Rhino chromodomain in complex with H3K9me3 · H3K9me3 (chains D,E,F) | unmapped |
| EV-PDB-4UP0-2 RCSB PDB | xray | resolution: 1.28 Å | in vitro · -173.15 °C · ligands ZN Ternary crystal structure of the Pygo2 PHD finger in complex with the B9L HD1 domain and a H3K4me2 peptide · HISTONE H3.1 (chains F) | unmapped |
| EV-PDB-4UY4-2 RCSB PDB | xray | resolution: 1.862 Å | in vitro · -173.15 °C · pH 7 · ligands GOL 1.86 A structure of human Spindlin-4 protein in complex with histone H3K4me3 peptide · HISTONE H3K4ME3 (chains C,D) | unmapped |
| EV-PDB-4Y6L-2 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · ligands ZN Human SIRT2 in complex with myristoylated peptide (H3K9myr) · peptide THR-ALA-ARG-MYK-SER-THR-GLY (chains C,D) | unmapped |
| EV-PDB-4YHP-1 RCSB PDB | xray | resolution: 2.53 Å | in vitro · -173.15 °C · pH 8 Crystal structure of 309M3-B Fab in complex with H3K9me3 peptide · H3K9me3 peptide (chains P,Q) | unmapped |
| EV-PDB-4YM5-1 RCSB PDB | xray | resolution: 4.005 Å | in vitro · -173.15 °C · pH 6 Crystal structure of the human nucleosome containing 6-4PP (inside) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-4YM6-1 RCSB PDB | xray | resolution: 3.514 Å | in vitro · -173.15 °C · pH 6 Crystal structure of the human nucleosome containing 6-4PP (outside) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-4Z0R-2 RCSB PDB | xray | resolution: 1.75 Å | in vitro · -173.15 °C · pH 7.5 · ligands EDO, SO4, UNX, ZN Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide · Histone H3.1 (chains D) | unmapped |
| EV-PDB-4Z2M-2 RCSB PDB | xray | resolution: 2.981 Å | in vitro · -173.15 °C · pH 7 Crystal structure of human SPT16 Mid-AID/H3-H4 tetramer FACT Histone complex · Histone H3.1 (chains G,I) | unmapped |
| EV-PDB-5AV5-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 6 · ligands MN human nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5AV9-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 6 · ligands MN human nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5AVB-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 6 · ligands MN human nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5AVC-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 6 · ligands MN human nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5B24-1 RCSB PDB | xray | resolution: 3.6 Å | in vitro · -173.15 °C · pH 6 The crystal structure of the nucleosome containing cyclobutane pyrimidine dimer · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5B31-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN The crystal structure of the heterotypic H2AZ/H2A nucleosome with H3.1. · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5C11-2 RCSB PDB | xray | resolution: 2.803 Å | in vitro · -173.15 °C · pH 8.5 · ligands ZN Crystal Structure of Jarid1a PHD finger bound to histone H3C4me3 peptide · H3 peptide (chains B) | unmapped |
| EV-PDB-5C13-2 RCSB PDB | xray | resolution: 2.101 Å | in vitro · -173.15 °C · pH 6.5 · ligands ZN Crystal Structure of TAF3 PHD finger bound to histone H3C4me3 peptide · H3 peptide (chains D,F,H,P) | unmapped |
| EV-PDB-5C3I-2 RCSB PDB | xray | resolution: 3.5 Å | in vitro · -173.15 °C · pH 8 Crystal structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2 · Histone H3.1 (chains B,F,J,N,R,V) | unmapped |
| EV-PDB-5CPI-1 RCSB PDB | xray | resolution: 2.902 Å | in vitro · -173.15 °C · pH 6 Nucleosome containing unmethylated Sat2R DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5CPJ-1 RCSB PDB | xray | resolution: 3.15 Å | in vitro · -173.15 °C · pH 6 Nucleosome containing methylated Sat2R DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5CPK-1 RCSB PDB | xray | resolution: 2.632 Å | in vitro · -173.15 °C · pH 6 Nucleosome containing methylated Sat2L DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5DAH-2 RCSB PDB | xray | resolution: 2.611 Å | in vitro · -173.15 °C · ligands SO4, ZN Crystal structure of PZP domain of human AF10 protein fused with Histone H3 peptide · Histone H3 peptide (chains C,D) | unmapped |
| EV-PDB-5FB0-2 RCSB PDB | xray | resolution: 2.702 Å | in vitro · -173.15 °C · ligands ZN Crystal Structure of a PHD finger bound to histone H3 T3ph peptide · Peptide from Histone H3 (chains D,F) | unmapped |
| EV-PDB-5FFV-2 RCSB PDB | xray | resolution: 1.3 Å | in vitro · -173.15 °C · pH 5.5 · ligands EDO Crystal structure of the bromodomain of human BRPF1 in complex with H3K14ac histone peptide · Histone H3 (chains C,D) | unmapped |
| EV-PDB-5GH9-2 RCSB PDB | xray | resolution: 1.451 Å | in vitro · -173.15 °C · pH 7.5 Crystal structure of CBP Bromodomain with H3K56ac peptide · Histone H3 (chains B) | unmapped |
| EV-PDB-5FB1-2 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C · pH 5.5 · ligands MLI, ZN Crystal Structure of a PHD finger bound to histone H3 K9me3 peptide · Peptide from Histone H3 (chains C) | unmapped |
| EV-PDB-5D6Y-2 RCSB PDB | xray | resolution: 2.287 Å | in vitro · -173.15 °C Crystal structure of double tudor domain of human lysine demethylase KDM4A complexed with histone H3K23me3 · peptide H3K23me3 (19-28) (chains a,b,c,d) | unmapped |
| EV-PDB-5B2J-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 6 · ligands MN Human nucleosome containing CpG methylated DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5B2I-1 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · pH 6 · ligands MN Human nucleosome containing CpG unmethylated DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5AV8-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 6 · ligands MN human nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5AV6-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 6 · ligands MN human nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-4YHZ-3 RCSB PDB | xray | resolution: 2.304 Å | in vitro · -173.15 °C · pH 7.5 · ligands GOL, SO4 Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide · H3K4me3 peptide (chains P) | unmapped |
| EV-PDB-4X3K-2 RCSB PDB | xray | resolution: 1.45 Å | in vitro · -173.15 °C · pH 6.5 · ligands K, NI Crystal structure of chromobox homolog 7 (CBX7) chromodomain with H3K27me3 peptide · H3K27me3 peptide (chains C,D) | unmapped |
| EV-PDB-4N4H-2 RCSB PDB | xray | resolution: 2.302 Å | in vitro · -173.15 °C · pH 8.3 · ligands PEG, PO4, ZN Crystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha in complex with histone H3.1K36me3 · Peptide from Histone H3.1 (chains B) | unmapped |
| EV-PDB-5GSE-1 RCSB PDB | xray | resolution: 3.14 Å | in vitro · -173.15 °C · pH 7.8 Crystal structure of unusual nucleosome · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-5GSU-1 RCSB PDB | xray | resolution: 3.1 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of nucleosome core particle consisting of human testis-specific histone variants, Th2A and Th2B · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5GT0-1 RCSB PDB | xray | resolution: 2.82 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of nucleosome complex with human testis-specific histone variants, Th2a · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5GT3-1 RCSB PDB | xray | resolution: 2.91 Å | in vitro · -173.15 °C · ligands CL, MN Crystal structure of nucleosome particle in the presence of human testis-specific histone variant, hTh2b · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5GTC-1 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 6.5 · ligands CL, MN Crystal structure of complex between DMAP-SH conjugated with a Kaposi's sarcoma herpesvirus LANA peptide (5-15) and nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5H6Q-3 RCSB PDB | xray | resolution: 2.53 Å | in vitro · -173.15 °C · ligands FAD, GOL Crystal structure of LSD1-CoREST in complex with peptide 11 · peptide SRTMQTARKSTGGKAPRKQLK (chains C) | unmapped |
| EV-PDB-5HJB-2 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 5.6 AF9 YEATS in complex with histone H3 Crotonylation at K9 · peptide of Histone H3.1 (chains B) | unmapped |
| EV-PDB-5HJC-2 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 6.5 · ligands CL, EDO BRD3 second bromodomain in complex with histone H3 acetylation at K18 · peptide of Histone H3.1 (chains B) | unmapped |
| EV-PDB-5HJD-2 RCSB PDB | xray | resolution: 2.806 Å | in vitro · -173.15 °C · pH 5.6 · ligands CU, SO4 AF9 YEATS in complex with histone H3 Crotonylation at K18 · peptide of Histone H3.1 (chains B,D,F,H,I,J,L,M) | unmapped |
| EV-PDB-5HYN-4 RCSB PDB | xray | resolution: 2.95 Å | in vitro · -173.15 °C · pH 6.5 · ligands SAH, ZN Structure of Human Polycomb Repressive Complex 2 (PRC2) with oncogenic histone H3K27M peptide · H3K27M (chains D,I,O,T) | unmapped |
| EV-PDB-5J3V-2 RCSB PDB | xray | resolution: 3.05 Å | in vitro · -173.15 °C · pH 7.5 Crystal structure of human Karyopherin-beta2 bound to the histone H3 tail · Histone H3 (chains C,D) | unmapped |
| EV-PDB-5J9S-2 RCSB PDB | xray | resolution: 2.702 Å | in vitro · -173.15 °C · ligands SO4 ENL YEATS in complex with histone H3 acetylation at K27 · H3K27ac peptide from Histone H3.1 (chains B) | unmapped |
| EV-PDB-5JRG-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of the nucleosome containing the DNA with tetrahydrofuran (THF) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5KKL-3 RCSB PDB | xray | resolution: 2.94 Å | in vitro · -180.15 °C · ligands SAM, ZN Structure of ctPRC2 in complex with H3K27me3 and H3K27M · ALA-ALA-ARG-M3L-SER-ALA-PRO-ALA (chains D) | unmapped |
| EV-PDB-5KKL-2 RCSB PDB | xray | resolution: 2.94 Å | in vitro · -180.15 °C · ligands SAM, ZN Structure of ctPRC2 in complex with H3K27me3 and H3K27M · Putative uncharacterized protein,Histone H3.1 peptide,Zinc finger domain-containing protein (chains B) | unmapped |
| EV-PDB-5LUG-2 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -173.15 °C · pH 5.5 · ligands 2MR, EDO Crystal structure of human Spindlin-2B protein in complex with ART(M3L)QTA(2MR)KS peptide · ALA-ARG-THR-M3L-GLN-THR-ALA-2MR-LYS-SER (chains E,F,G,H) | unmapped |
| EV-PDB-5NNC-2 RCSB PDB | xray | resolution: 2.22 Å | in vitro · -173.15 °C · pH 8 Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated histone 4 peptide (H3K9ac/K14ac) · Histone H3 (chains C,D) | unmapped |
| EV-PDB-5NND-2 RCSB PDB | xray | resolution: 1.82 Å | in vitro · -173.15 °C · pH 7.5 · ligands EDO Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated histone 4 peptide (H3K9ac/K14ac) · Histone H3 (chains D,E) | unmapped |
| EV-PDB-5SVX-2 RCSB PDB | xray | resolution: 1.56 Å | in vitro · -173.15 °C · ligands ZN MORC3 CW in complex with histone H3K4me3 · H3K4me3 (chains B) | unmapped |
| EV-PDB-5SVY-2 RCSB PDB | xray | resolution: 1.05 Å | in vitro · -173.15 °C · ligands ACT, ZN MORC3 CW in complex with histone H3K4me1 · H3K4me1 (chains B) | unmapped |
| EV-PDB-5SZC-2 RCSB PDB | xray | resolution: 1.193 Å | in vitro · -173.15 °C · pH 7.5 · ligands MPD, ZN Structure of human Dpf3 double-PHD domain bound to histone H3 tail peptide with monomethylated K4 and acetylated K14 · Histone H3 tail peptide (chains H) | unmapped |
| EV-PDB-5T8R-2 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 8.5 · ligands GOL, PO4, ZN Crystal structure of human BAZ2A PHD zinc finger in complex with unmodified H3 10-mer · Histone H3.1 (chains E,G) | unmapped |
| EV-PDB-5TDR-2 RCSB PDB | xray | resolution: 1.42 Å | in vitro · -173.15 °C · pH 6.9 · ligands NA, ZN Set3 PHD finger in complex with histone H3K4me2 · Histone H3 (chains B) | unmapped |
| EV-PDB-5V21-2 RCSB PDB | xray | resolution: 2.415 Å | in vitro · -173.15 °C · pH 6.5 · ligands SAM, ZN Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAM · Histone H3K36M peptide (chains B) | unmapped |
| EV-PDB-5VA6-2 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · ligands SAH CRYSTAL STRUCTURE OF ATXR5 IN COMPLEX WITH HISTONE H3.1 MONO-METHYLATED ON R26 · Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-5VAB-2 RCSB PDB | xray | resolution: 1.702 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of ATXR5 PHD domain in complex with histone H3 · Histone H3 peptide (chains F) | unmapped |
| EV-PDB-5VGE-3 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 8.5 · ligands ZN Crystal structure of HLA-C*07:02 in complex with RYR peptide · ARG-TYR-ARG-PRO-GLY-THR-VAL-ALA-LEU (chains C) | unmapped |
| EV-PDB-5VNB-2 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -163.15 °C · pH 9.4 · ligands EDO, SO4 YEATS in complex with histone H3 · H3K23acK27ac peptide (chains K) | unmapped |
| EV-PDB-5WFC-3 RCSB PDB | xray | resolution: 2.282 Å | in vitro · -180 °C · pH 7 · ligands A97, ZN Humanized mutant of the Chaetomium thermophilum Polycomb Repressive Complex 2 bound to the inhibitor GSK343 · Histone H3.1 (chains D) | unmapped |
| EV-PDB-5WLE-2 RCSB PDB | xray | resolution: 1.952 Å | in vitro · -173.15 °C · pH 8.4 · ligands ZN Crystal structure of the PPS PHD finger in complex with H3K4me3 · H3K4me3 Peptide (chains C) | unmapped |
| EV-PDB-5WXG-2 RCSB PDB | xray | resolution: 1.703 Å | in vitro · -173.15 °C · pH 6.5 · ligands MG, ZN Structure of TAF PHD finger domain binds to H3(1-15)K4ac · Histone H3K4ac (chains P) | unmapped |
| EV-PDB-5WVO-3 RCSB PDB | xray | resolution: 1.997 Å | in vitro · -180.15 °C · pH 6 · ligands ZN Crystal structure of DNMT1 RFTS domain in complex with K18/K23 mono-ubiquitylated histone H3 · Histone H3.1 (chains D) | unmapped |
| EV-PDB-5V22-2 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 6.5 · ligands SAH, ZN Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAH · Histone H3K36M peptide (chains B) | unmapped |
| EV-PDB-5U2J-1 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · pH 7 · ligands ZN MORF double PHD finger (DPF) in complex with histone H3K14bu · Histone H3K14bu (chains C,D) | unmapped |
| EV-PDB-5TDW-2 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -173.15 °C · ligands NA, ZN Set3 PHD finger in complex with histone H3K4me3 · histone H3K4me3 (chains B) | unmapped |
| EV-PDB-5TBN-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7 · ligands ZN Solution NMR structure of PHF20 PHD domain in complex with a histone H3K4me2 peptide · Histone H3.1 (chains C) | unmapped |
| EV-PDB-5T1I-2 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · pH 7.5 · ligands UNX CBX3 chromo shadow domain in complex with histone H3 peptide · Histone H3.1 (chains C) | unmapped |
| EV-PDB-5T1G-2 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · pH 7.5 · ligands UNX chromo shadow domain of CBX1 in complex with a histone peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-5T0M-2 RCSB PDB | xray | resolution: 1.896 Å | in vitro · -173.15 °C · ligands SAH, SAM, ZN A histone H3K9M mutation traps histone methyltransferase Clr4 to prevent heterochromatin spreading · THR-LYS-GLN-THR-ALA-ARG-NLE-SER-THR-GLY (chains C,P) | unmapped |
| EV-PDB-5T0K-2 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -173.15 °C · pH 7.5 · ligands SAM, ZN Structure of G9a SET-domain with H3K9M mutant peptide and SAM · H3K9 mutant peptide (chains P,Q) | unmapped |
| EV-PDB-5SZB-2 RCSB PDB | xray | resolution: 1.2 Å | in vitro · -173.15 °C · pH 7.5 · ligands MPD, ZN Structure of human Dpf3 double-PHD domain bound to histone H3 tail peptide with acetylated K14 · Histone H3 tail peptide (chains H) | unmapped |
| EV-PDB-5OY3-2 RCSB PDB | xray | resolution: 2.136 Å | in vitro · -193.15 °C · pH 7.5 · ligands AKG, EDO, FE, TBU, ZN The structural basis of the histone demethylase KDM6B histone 3 lysine 27 specificity · Histone 3 peptide H3(17-33)A21M (chains B) | unmapped |
| EV-PDB-5M5G-3 RCSB PDB | xray | resolution: 2.27 Å | in vitro · -180.15 °C · pH 7 · ligands SAH, ZN Crystal structure of the Chaetomium Thermophilum polycomb repressive complex 2 (PRC2) · HISTONE H3 11-Mer peptide (chains D) | unmapped |
| EV-PDB-5KJH-3 RCSB PDB | xray | resolution: 2.27 Å | in vitro · -180.15 °C · ligands SAH, ZN Crystal structure of an active polycomb repressive complex 2 in the stimulated state · Peptide H3K27me3 (chains D) | unmapped |
| EV-PDB-5JJ0-2 RCSB PDB | xray | resolution: 1.72 Å | in vitro · -95.15 °C · pH 7 · ligands SAM, ZN Structure of G9a SET-domain with Histone H3K9M peptide and excess SAH · Histone H3K9M mutant peptide (chains F,G) | unmapped |
| EV-PDB-5JIY-2 RCSB PDB | xray | resolution: 1.48 Å | in vitro · -95.15 °C · pH 7 · ligands SAM, ZN Structure of G9a SET-domain with Histone H3K9norLeucine mutant peptide and bound S-adenosylmethionine · Histone H3.1 mutant peptide with H3K9nor-leucine (chains F,G) | unmapped |
| EV-PDB-5JIN-2 RCSB PDB | xray | resolution: 1.85 Å | in vitro · -95.15 °C · pH 7 · ligands SAM, ZN Structure of G9a SET-domain with Histone H3K9M mutant peptide and bound S-adenosylmethionine · Histone H3.1 peptide with K9M mutation (chains F,G) | unmapped |
| EV-PDB-5JHN-2 RCSB PDB | xray | resolution: 1.67 Å | in vitro · -98.15 °C · pH 7 · ligands SAM, ZN Structure of G9a SET-domain with Histone H3K9Ala mutant peptide and bound S-adenosylmethionine · Histone H3.1 peptide with K9A mutation (chains F,G) | unmapped |
| EV-PDB-5IQL-2 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C · pH 7 Crystal structure of YEATS2 YEATS bound to H3K27cr peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-5I3L-2 RCSB PDB | xray | resolution: 1.85 Å | in vitro · -173.15 °C · pH 7.5 · ligands EDO, NA, UNX, ZN DPF3b in complex with H3K14ac peptide · H3K14ac peptide (chains C) | unmapped |
| EV-PDB-5H6R-3 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 5.5 · ligands FAD, GOL Crystal structure of LSD1-CoREST in complex with peptide 13 · PEPTIDE (HSE)RTMQTARKSTGGKAPRKQLK (chains C) | unmapped |
| EV-PDB-5WXH-2 RCSB PDB | xray | resolution: 1.297 Å | in vitro · -173.15 °C · pH 6.5 · ligands ZN Crystal structure of TAF3 PHD finger bound to H3K4me3 · Histone H3K4me3 (chains D,P) | unmapped |
| EV-PDB-5WYI-3 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · ligands SIN, SLL The Yaf9 YEATS domain Recognizing H3K122suc Peptide · ILE-MET-PRO-LYS-ASP-ILE-GLN-LEU (chains E) | unmapped |
| EV-PDB-5X60-3 RCSB PDB | xray | resolution: 2.69 Å | in vitro · -173.15 °C · ligands FAD, GOL Crystal structure of LSD1-CoREST in complex with peptide 9 · PEPTIDE SRTMQTARKSTGGKAPRKQL (chains C) | unmapped |
| EV-PDB-5XF3-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · ligands MG, RRK, RUD, SO4 Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane) compound having a 1,2-diphenylethylenediamine linker (R,R-configuration) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5XF5-1 RCSB PDB | xray | resolution: 2.82 Å | in vitro · -173.15 °C · ligands MG, RSK, RUD, SO4 Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane) compound having a 1,2-diphenylethylenediamine linker (R,S-configuration) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5XFQ-3 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -196.15 °C · ligands ZN Ternary complex of PHF1, a DNA duplex and a histone peptide · Peptide from Histone H3 (chains E,F) | unmapped |
| EV-PDB-5XTZ-2 RCSB PDB | xray | resolution: 2.105 Å | in vitro · -173.15 °C · pH 4.6 · ligands ACT Crystal structure of GAS41 YEATS bound to H3K27ac peptide · THR-LYS-ALA-ALA-ARG-ALY-SER-ALA-PRO-ALA (chains E) | unmapped |
| EV-PDB-5Y0D-1 RCSB PDB | xray | resolution: 1.99 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of the human nucleosome containing the H2B E76K mutant · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5Y20-2 RCSB PDB | xray | resolution: 2.409 Å | in vitro · -173.15 °C · pH 8.5 · ligands ZN Crystal structure of AL1 PHD finger bound to H3K4me3 · PEPTIDE FROM HISTONE H3 (chains P) | unmapped |
| EV-PDB-5Y2F-2 RCSB PDB | xray | resolution: 2.53 Å | in vitro · -173.15 °C · pH 6.5 · ligands 8L9, AR6, GOL, HDR, PEG, SO4, ZN Human SIRT6 in complex with allosteric activator MDL-801 · 9-mer peptide QTARKSTGG (chains C) | unmapped |
| EV-PDB-5Z23-1 RCSB PDB | xray | resolution: 2.73 Å | in vitro · -173.15 °C · pH 6 Crystal structure of the nucleosome containing a chimeric histone H3/CENP-A CATD · Histone H3.1,Histone H3-like centromeric protein A,Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5Z30-1 RCSB PDB | xray | resolution: 2.45 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN The crystal structure of the nucleosome containing a cancer-associated histone H2A.Z R80C mutant · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5ZBX-1 RCSB PDB | xray | resolution: 2.58 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN The crystal structure of the nucleosome containing histone H3.1 CATD(V76Q, K77D) · Histone H3.1,Histone H3-like centromeric protein A,Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6AXJ-2 RCSB PDB | xray | resolution: 2.379 Å | in vitro · -173.15 °C · pH 5.5 · ligands GOL, SO4 Crystal structure of the Yaf9 YEATS domain bound to H3K27ac · ALY-SER-ALA-PRO-ALA (chains E,F,G,H) | unmapped |
| EV-PDB-6AZE-2 RCSB PDB | xray | resolution: 2.451 Å | in vitro · -173.15 °C · pH 7.5 · ligands ZN Crystal Structure of the BPTF PHD-bromodomain module bound to H3KC4me3 methyl lysine analog · ALA-ARG-THR-ML3-GLN-THR (chains P) | unmapped |
| EV-PDB-6BHD-2 RCSB PDB | xray | resolution: 1.25 Å | in vitro · -173.15 °C · pH 7.5 · ligands NA, UNX Crystal structure of SETDB1 with a modified H3 peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-6BHE-2 RCSB PDB | xray | resolution: 1.35 Å | in vitro · -173.15 °C · pH 7.5 · ligands UNX Crystal structure of SETDB1 with a modified H3 peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-6BHG-2 RCSB PDB | xray | resolution: 1.45 Å | in vitro · -173.15 °C · pH 6.5 · ligands UNX Crystal structure of SETDB1 with a modified H3 peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-6BHH-2 RCSB PDB | xray | resolution: 1.85 Å | in vitro · -173.15 °C · pH 7.5 · ligands SO4, UNX Crystal structure of SETDB1 with a modified H3 peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-6BHI-2 RCSB PDB | xray | resolution: 1.4 Å | in vitro · -173.15 °C · pH 7.5 · ligands UNX Crystal structure of SETDB1 with a modified H3 peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-6D07-2 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C · pH 8 · ligands GOL Crystal structure of the complex between human chromobox homolog 1 (CBX1) and H3K9me3 peptide · Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-6E83-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7 · ligands ZN Solution structure of ZZZ3 ZZ domain in complex with histone H3 tail · Histone H3 (chains A) | unmapped |
| EV-PDB-6F6D-2 RCSB PDB | xray | resolution: 1.81811 Å | in vitro · -196.15 °C · pH 8 · ligands AKG, FE, TBU, ZN The catalytic domain of KDM6B in complex with H3(17-33)K18IA21M peptide · Histone 3 peptide H3(17-33)K18IA21M (chains B) | unmapped |
| EV-PDB-6HGT-2 RCSB PDB | xray | resolution: 2.33 Å | in vitro · -173.15 °C · pH 7.5 · ligands OGA, ZN Crystal structure of human KDM4A complexed with co-substrate analog NOG and histone H3 peptide with K9R mutation · Histone H3.3 (chains E,F,G,H) | unmapped |
| EV-PDB-6HKT-1 RCSB PDB | xray | resolution: 9.7 Å | in vitro · -173.15 °C · pH 8.8 Structure of an H1-bound 6-nucleosome array · Histone H3.1 (chains A,E,K,O,U,Y,a,e,k,o,u,y) | unmapped |
| EV-PDB-6IEU-2 RCSB PDB | xray | resolution: 1.787 Å | in vitro · -173.15 °C · ligands GOL, ZN The structure of TRIM66 PHD-Bromo domain with unmodified H3 N terminal peptide · ALA-ARG-THR-LYS-GLN-THR-ALA-ARG-LYS-SER-THR-GLY (chains C) | unmapped |
| EV-PDB-6IIS-3 RCSB PDB | xray | resolution: 2.358 Å | in vitro · -196.15 °C · pH 7.5 Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me3-containing histone peptide · H3K36me3 peptide (chains E,F) | unmapped |
| EV-PDB-6IIT-3 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -196.15 °C · pH 7.5 Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me2-containing histone peptide · H3K36me2-containing histone peptide (chains E,F) | unmapped |
| EV-PDB-6IPU-1 RCSB PDB | xray | resolution: 1.99 Å | in vitro · -175 °C · pH 6 · ligands CL, MN Human nucleosome core particle containing 145 bp of DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6IQ4-1 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -175 °C · pH 6 · ligands AU, D0X, MG, XIS Nucleosome core particle cross-linked with a hetero-binuclear molecule possessing RAPTA and gold(I) 4-(diphenylphosphino)benzoic acid groups. · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6JOU-1 RCSB PDB | xray | resolution: 2.17 Å | in vitro · -173.15 °C · pH 6 · ligands MN Crystal structure of the human nucleosome containing H2A.Z.1 S42R · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6JR0-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of the human nucleosome phased with 12 selenium atoms · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6JR1-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of the human nucleosome phased with 16 selenium atoms · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6JXD-5 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -175 °C · pH 6 · ligands MN Human nucleosome core particle with cohesive end DNA termini · Histone H3.1 (chains E) | unmapped |
| EV-PDB-6JXD-1 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -175 °C · pH 6 · ligands MN Human nucleosome core particle with cohesive end DNA termini · Histone H3.1 (chains A) | unmapped |
| EV-PDB-6K1I-1 RCSB PDB | xray | resolution: 2.75 Å | in vitro · -175 °C · pH 6 · ligands CL, K, MN Human nucleosome core particle with gammaH2A.X variant · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6K1J-1 RCSB PDB | xray | resolution: 2.85 Å | in vitro · -175 °C · pH 6 · ligands CL, MN Human nucleosome core particle with H2A.X variant · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6K1K-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -175 °C · pH 6 · ligands CL, K, MN Human nucleosome core particle with H2A.X S139E variant · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6KE9-1 RCSB PDB | xray | resolution: 2.22 Å | in vitro · -173.15 °C · ligands MN The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6KVD-2 RCSB PDB | xray | resolution: 2.21 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal structure of human nucleosome containing H2A.J · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6L49-7 RCSB PDB | cryoem | resolution: 18.9 Å | in vitro H3-CA-H3 tri-nucleosome with the 22 base-pair linker DNA · Histone H3.1 (chains K,O,S,W) | unmapped |
| EV-PDB-6L4A-1 RCSB PDB | cryoem | resolution: 12.3 Å | in vitro H3-H3-H3 tri-nucleosome with the 22 base-pair linker DNA · Histone H3.1 (chains A,E,K,O,S,W) | unmapped |
| EV-PDB-6L9H-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · ligands MN The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6L9Z-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -175.15 °C · pH 4.5 · ligands CA, CL, K 338 bp di-nucleosome assembled with linker histone H1.X · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6HTS-5 RCSB PDB | cryoem | resolution: 4.8 Å | in vitro · ligands ADP, ZN Cryo-EM structure of the human INO80 complex bound to nucleosome · Histone H3.1 (chains I,M) | unmapped |
| EV-PDB-6E86-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7 · ligands ZN Solution structure of ZZZ3 ZZ domain in complex with histone H3K4ac peptide · H3K4ac (chains A) | unmapped |
| EV-PDB-6D08-2 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C · ligands GOL, SO4 Crystal structure of an engineered bump-hole complex of mutant human chromobox homolog 1 (CBX1) with H3K9bn peptide · Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-5Y0C-2 RCSB PDB | xray | resolution: 2.087 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN Crystal Structure of the human nucleosome at 2.09 angstrom resolution · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-5XNV-2 RCSB PDB | xray | resolution: 2.696 Å | in vitro · -173.15 °C · pH 10 · ligands CL, NH4 Crystal structure of YEATS2 YEATS bound to H3K27ac peptide · ALA-ALA-ARG-ALY-SER-ALA-PRO-ALA (chains B) | unmapped |
| EV-PDB-5XFR-2 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -196.15 °C · ligands ZN Ternary complex of MTF2, DNA and histone · Peptide from Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-5XF4-1 RCSB PDB | xray | resolution: 2.87 Å | in vitro · -173.15 °C · ligands MG, RUD, SO4, SSK Nucleosome core particle with an adduct of a binuclear RAPTA (Ru-arene-phosphaadamantane) compound having a 1,2-diphenylethylenediamine linker (S,S-configuration) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6LA2-1 RCSB PDB | xray | resolution: 3.89 Å | in vitro · -175 °C · pH 4.5 343 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0 · Histone H3.1 (chains A,E,K,O,U,Y,e,i) | unmapped |
| EV-PDB-6LA8-1 RCSB PDB | xray | resolution: 3.4 Å | in vitro · -175 °C · pH 4.5 · ligands CA, K 349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6LA9-1 RCSB PDB | xray | resolution: 3.7 Å | in vitro · -175 °C · pH 4.5 · ligands CA, K 349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0 (high cryoprotectant) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6LAB-1 RCSB PDB | xray | resolution: 3.2 Å | in vitro · -175 °C · pH 4.5 · ligands CA, CL, K 169 bp nucleosome, harboring cohesive DNA termini, assembled with linker histone H1.0 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6PAG-3 RCSB PDB | xray | resolution: 2.501 Å | in vitro · -173.15 °C · pH 8 Killer cell immunoglobulin-like receptor 2DL3 in complex with HLA-C*07:02 · ARG-TYR-ARG-PRO-GLY-THR-VAL-ALA-LEU (chains C) | unmapped |
| EV-PDB-6R91-1 RCSB PDB | cryoem | resolution: 4.1 Å | in vitro Cryo-EM structure of NCP_THF2(-3)-UV-DDB · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6R93-3 RCSB PDB | cryoem | resolution: 4 Å | in vitro Cryo-EM structure of NCP-6-4PP · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6V2H-2 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 6 · ligands NI, UNX Crystal structure of CDYL2 in complex with H3tK27me3 · H3tK27me3 (chains B,D,F,H,J,L) | unmapped |
| EV-PDB-6V92-23 RCSB PDB | cryoem | resolution: 20 Å | in vitro · ligands ZN RSC-NCP · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-6YIH-4 RCSB PDB | xray | resolution: 2.55 Å | in vitro · -163.15 °C · pH 7 · ligands SO4, ZN Structure of Chromosomal Passenger Complex (CPC) bound to phosphorylated Histone 3 peptide at 2.6 A. · Histone H3.1 (chains D) | unmapped |
| EV-PDB-7BWD-5 RCSB PDB | cryoem | resolution: 4.32 Å | in vitro · ligands SAH Structure of Dot1L-H2BK34ub Nucleosome Complex · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7CFQ-2 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · ligands EDO, GOL, SRO Crystal structure of WDR5 in complex with H3K4me3Q5ser peptide · H3K4me3Q5ser peptide (chains B) | unmapped |
| EV-PDB-7CFP-2 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · ligands SRO Crystal structure of WDR5 in complex with a H3Q5ser peptide · H3Q5ser peptide (chains B) | unmapped |
| EV-PDB-7CCR-1 RCSB PDB | cryoem | resolution: 4.9 Å | in vitro Structure of the 2:2 cGAS-nucleosome complex · Histone H3.1 (chains A,E,L,P) | unmapped |
| EV-PDB-7CCQ-1 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro Structure of the 1:1 cGAS-nucleosome complex · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7C0M-1 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro · ligands ZN Human cGAS-nucleosome complex · Histone H3.1 (chains A,E,a,e) | unmapped |
| EV-PDB-6YOV-5 RCSB PDB | cryoem | resolution: 3.42 Å | in vitro · ligands PTD OCT4-SOX2-bound nucleosome - SHL+6 · Histone H3.1 (chains E) | unmapped |
| EV-PDB-6YOV-1 RCSB PDB | cryoem | resolution: 3.42 Å | in vitro · ligands PTD OCT4-SOX2-bound nucleosome - SHL+6 · Histone H3.1 (chains A) | unmapped |
| EV-PDB-6YIF-4 RCSB PDB | xray | resolution: 1.81 Å | in vitro · -163.15 °C · pH 6.5 · ligands SO4, ZN Structure of Chromosomal Passenger Complex (CPC) bound to phosphorylated Histone 3 peptide at 1.8 A. · Phosphorylated (Thr3) Histone H3 (chains D) | unmapped |
| EV-PDB-6WW4-1 RCSB PDB | xray | resolution: 2.252 Å | in vitro · -173.15 °C · ligands GOL, ZN Crystal structure of HERC2 ZZ domain in complex with histone H3 tail · Histone H3.1,E3 ubiquitin-protein ligase HERC2 (chains A,B) | unmapped |
| EV-PDB-6WAV-2 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -173.15 °C · pH 4.6 · ligands SO4, UNX Crystal structure of PHF1 in complex with H3K36me3 substitution · Histone H3.1 (chains E,F,G,H) | unmapped |
| EV-PDB-6VIL-2 RCSB PDB | xray | resolution: 3.301 Å | in vitro · -173.15 °C · pH 5.4 Crystal structure of mouse BAHCC1 BAH domain in complex with H3K27me3 · Histone H3.1 (chains I,J,L,M) | unmapped |
| EV-PDB-6V41-2 RCSB PDB | xray | resolution: 1.603 Å | in vitro · -173.15 °C · pH 7.5 · ligands UNX crystal structure of CDY1 chromodomain bound to H3K9me3 · Histone H3.1 Peptide (chains QQQ) | unmapped |
| EV-PDB-6V3N-2 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 5.5 · ligands UNX Crystal structure of CDYL2 in complex with H3K27me3 · ACE-GLN-LEU-ALA-THR-LYS-ALA-ALA-ARG-M3L-SER-ALA-PRO-ALA-THR-TYR-NH2 (chains C,D) | unmapped |
| EV-PDB-6V2K-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 6 · ligands CL, MN The nucleosome structure after H2A-H2B exchange · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6USJ-3 RCSB PDB | cryoem | resolution: 10.5 Å | in vitro Structure of two nucleosomes bridged by human PARP2 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6UPL-1 RCSB PDB | cryoem | resolution: 7.4 Å | in vitro Structure of FACT_subnucleosome complex 2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6UPK-1 RCSB PDB | cryoem | resolution: 4.9 Å | in vitro Structure of FACT_subnucleosome complex 1 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6T93-1 RCSB PDB | cryoem | resolution: 3.49 Å | in vitro Nucleosome with OCT4-SOX2 motif at SHL-6 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6T90-5 RCSB PDB | cryoem | resolution: 3.05 Å | in vitro · ligands PTD OCT4-SOX2-bound nucleosome - SHL-6 · Histone H3.1 (chains E) | unmapped |
| EV-PDB-6T90-1 RCSB PDB | cryoem | resolution: 3.05 Å | in vitro · ligands PTD OCT4-SOX2-bound nucleosome - SHL-6 · Histone H3.1 (chains A) | unmapped |
| EV-PDB-6R94-3 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro Cryo-EM structure of NCP_THF2(-3) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6R92-4 RCSB PDB | cryoem | resolution: 4.8 Å | in vitro Cryo-EM structure of NCP-THF2(+1)-UV-DDB class B · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6R90-1 RCSB PDB | cryoem | resolution: 4.5 Å | in vitro Cryo-EM structure of NCP-THF2(+1)-UV-DDB class A · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6R8Z-1 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro Cryo-EM structure of NCP_THF2(-1)-UV-DDB · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6R8Y-1 RCSB PDB | cryoem | resolution: 4.3 Å | in vitro Cryo-EM structure of NCP-6-4PP(-1)-UV-DDB · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6QXZ-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 6.4 · ligands ZN Solution structure of the ASHH2 CW domain with the N-terminal histone H3 tail mimicking peptide monomethylated on lysine 4 · ALA-ARG-THR-MLZ-GLN-THR-ALA-ARG-TYR (chains B) | unmapped |
| EV-PDB-6PA1-3 RCSB PDB | xray | resolution: 3.01 Å | in vitro · -173.15 °C Killer cell immunoglobulin-like receptor 2DL2 in complex with HLA-C*07:02 · ARG-TYR-ARG-PRO-GLY-THR-VAL-ALA-LEU (chains C,G) | unmapped |
| EV-PDB-6MIQ-2 RCSB PDB | xray | resolution: 1.75 Å | in vitro · -173.15 °C Crystal structure of Taf14 YEATS domain in complex with histone H3K9bu · Histone H3K9bu (chains C) | unmapped |
| EV-PDB-6MIO-2 RCSB PDB | xray | resolution: 1.85 Å | in vitro · -173.15 °C Crystal structure of Taf14 YEATS domain in complex with histone H3K9pr · Histone H3K9pr (chains B) | unmapped |
| EV-PDB-6MIN-2 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C Crystal structure of Taf14 YEATS domain G82A mutant in complex with histone H3K9cr · Histone H3K9cr (chains B) | unmapped |
| EV-PDB-6MIM-2 RCSB PDB | xray | resolution: 2.525 Å | in vitro · -173.15 °C Crystal structure of AF9 YEATS domain Y78W mutant in complex with histone H3K9cr · Histone H3K9cr (chains B,D) | unmapped |
| EV-PDB-6MIL-2 RCSB PDB | xray | resolution: 1.93 Å | in vitro · -173.15 °C · ligands MLI, PEG Crystal structure of AF9 YEATS domain in complex with histone H3K9bu · Histone H3K9bu (chains B,D) | unmapped |
| EV-PDB-6M4H-3 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro Structural mechanism of nucleosome dynamics governed by human histone variants H2A.B and H2A.Z.2.2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6M4G-3 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro Structural mechanism of nucleosome dynamics governed by human histone variants H2A.B and H2A.Z.2.2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6M4D-1 RCSB PDB | cryoem | resolution: 4.4 Å | in vitro Structural mechanism of nucleosome dynamics governed by human histone variants H2A.B and H2A.Z.2.2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-6M44-1 RCSB PDB | xray | resolution: 3.81 Å | in vitro · -175.15 °C · pH 4.5 · ligands CA 355 bp di-nucleosome harboring cohesive DNA termini (high cryoprotectant) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6M3V-1 RCSB PDB | xray | resolution: 4.6 Å | in vitro · -175.15 °C · pH 4.5 · ligands CA, K 355 bp di-nucleosome harboring cohesive DNA termini · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6LSD-2 RCSB PDB | xray | resolution: 2.05 Å | in vitro · -173.15 °C · pH 9 · ligands GOL, SO4 Crystal Structure of YEATS domain of human YEATS2 in complex with H3K27bz peptide · 2 (chains C,D) | unmapped |
| EV-PDB-6LS6-2 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 5.5 Crystal Structure of YEATS domain of AF9 in complex with H3K9bz peptide · 2 (chains C,D) | unmapped |
| EV-PDB-6LER-1 RCSB PDB | xray | resolution: 3 Å | in vitro · -175 °C · pH 4.5 · ligands CA, K 169 bp nucleosome harboring non-identical cohesive DNA termini. · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-6LE9-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · ligands MN The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7COW-3 RCSB PDB | xray | resolution: 2.86 Å | in vitro · -175 °C · pH 4.5 · ligands CA, CL, K 353 bp di-nucleosome harboring cohesive DNA termini with linker histone H1.0 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-7D1Z-1 RCSB PDB | cryoem | resolution: 3.15 Å | in vitro Cryo-EM structure of SET8-nucleosome complex · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7DBP-2 RCSB PDB | cryoem | resolution: 4.5 Å | in vitro Linker histone defines structure and self-association behaviour of the 177 bp human chromosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7K5X-1 RCSB PDB | cryoem | resolution: 2.93 Å | in vitro Cryo-EM structure of a chromatosome containing human linker histone H1.0 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7K5Y-1 RCSB PDB | cryoem | resolution: 2.76 Å | in vitro Cryo-EM structure of a chromatosome containing human linker histone H1.4 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7K60-1 RCSB PDB | cryoem | resolution: 3.12 Å | in vitro Cryo-EM structure of a chromatosome containing human linker histone H1.10 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7K61-1 RCSB PDB | cryoem | resolution: 2.85 Å | in vitro Cryo-EM structure of 197bp nucleosome aided by scFv · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7K63-1 RCSB PDB | cryoem | resolution: 3.03 Å | in vitro Cryo-EM structure of a chromatosome containing chimeric linker histone gH1.10-ncH1.4 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7KLR-2 RCSB PDB | nmr_structure | structure | in vitro · 24.85 °C · pH 7.5 · ligands ZN Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide · Histone H3.1 (chains B) | unmapped |
| EV-PDB-7LBK-2 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of human Survivin bound to histone H3 T3phK4me3 peptide · histone H3 T3phK4me3 peptide (chains C,D) | unmapped |
| EV-PDB-7LBP-2 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of human Survivin bound to histone H3T3phK4ac peptide · histone H3T3phK4ac peptide (chains B,D) | unmapped |
| EV-PDB-7LYA-1 RCSB PDB | cryoem | resolution: 2.91 Å | in vitro Cryo-EM structure of the human nucleosome core particle with linked histone proteins H2A and H2B · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7LYB-1 RCSB PDB | cryoem | resolution: 3.28 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with BRCA1-BARD1-UbcH5c · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7LYC-1 RCSB PDB | cryoem | resolution: 2.94 Å | in vitro Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A Lys13 and Lys15 in complex with BARD1 (residues 415-777) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7MJU-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of human AF10 PZP bound to histone H3 tail · Histone H3.1,Protein AF-10 (chains A) | unmapped |
| EV-PDB-7NL0-1 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro Cryo-EM structure of the Lin28B nucleosome core particle · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7SCY-3 RCSB PDB | cryoem | resolution: 4.1 Å | in vitro Nuc147 bound to single BRCT · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7SCZ-3 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro Nuc147 bound to multiple BRCTs · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7TD5-5 RCSB PDB | xray | resolution: 2.994 Å | in vitro · -180.15 °C · ligands SAM, ZN Structure of human PRC2-EZH1 containing phosphorylated SUZ12 · THR-LYS-ALA-ALA-ARG-M3L-SER-ALA-PRO-ALA (chains E,J) | unmapped |
| EV-PDB-7TD5-4 RCSB PDB | xray | resolution: 2.994 Å | in vitro · -180.15 °C · ligands SAM, ZN Structure of human PRC2-EZH1 containing phosphorylated SUZ12 · THR-LYS-ALA-ALA-ARG-MET-SER-ALA-PRO-SER (chains D,I) | unmapped |
| EV-PDB-7U0G-1 RCSB PDB | cryoem | resolution: 2.6 Å | in vitro structure of LIN28b nucleosome bound 3 OCT4 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7U0I-1 RCSB PDB | cryoem | resolution: 2.6 Å | in vitro Structure of LIN28b nucleosome bound 2 OCT4 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7U0J-1 RCSB PDB | cryoem | resolution: 2.7 Å | in vitro Structure of 162bp LIN28b nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7V6Q-2 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · ligands 1PE, GOL Crystal structure of sNASP-ASF1A-H3.1-H4 complex · Histone H3.1 (chains B,F) | unmapped |
| EV-PDB-7V96-3 RCSB PDB | cryoem | resolution: 3.92 Å | in vitro Telomeric Dinucleosome · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-7V9K-1 RCSB PDB | cryoem | resolution: 8.1 Å | in vitro Telomeric tetranucleosome · Histone H3.1 (chains A,E,K,O,S,W,a,e) | unmapped |
| EV-PDB-7VA4-3 RCSB PDB | cryoem | resolution: 14 Å | in vitro Telomeric tetranucleosome in open state · Histone H3.1 (chains A,E,K,O,S,W,a,e) | unmapped |
| EV-PDB-7VZ4-1 RCSB PDB | cryoem | resolution: 1.89 Å | in vitro Cryo-EM structure of human nucleosome core particle composed of the Widom 601L DNA sequence · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7W9V-1 RCSB PDB | cryoem | resolution: 3.95 Å | in vitro Cryo-EM structure of nucleosome in complex with p300 acetyltransferase catalytic core (complex I) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7X57-1 RCSB PDB | cryoem | resolution: 3.63 Å | in vitro Cryo-EM structure of human subnucleosome (closed form) · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-7X58-1 RCSB PDB | cryoem | resolution: 3.93 Å | in vitro Cryo-EM structure of human subnucleosome (open form) · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-7X88-2 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -173.15 °C · pH 4 · ligands CIT Crystal structure of ENL YEATS domain T2 mutant in complex with histone H3 acetylation at K27 · Histone H3K27ac(24-27) peptide (chains B) | unmapped |
| EV-PDB-7X8F-2 RCSB PDB | xray | resolution: 2.44 Å | in vitro · -173.15 °C · pH 5.6 · ligands CL Crystal structure of ENL T4 mutant YEATS domain in complex with histone H3 acetylation at K27 · H3K27ac(24-27) peptide (chains B,D) | unmapped |
| EV-PDB-7X8G-2 RCSB PDB | xray | resolution: 1.91 Å | in vitro · -173.15 °C · pH 5.6 Crystal structure of ENL T1(H116P) mutant YEATS domain in complex with histone H3 acetylation at K27 · H3K27ac(24-27) peptide (chains B,D) | unmapped |
| EV-PDB-7XD1-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro cryo-EM structure of unmodified nucleosome · Histone H3 (chains A,E) | unmapped |
| EV-PDB-7XVL-1 RCSB PDB | xray | resolution: 3.506 Å | in vitro · -175 °C Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169an DNA fragment) · Histone H3.1 (chains A,E,K,O,U,Y,e,i) | unmapped |
| EV-PDB-7XVM-1 RCSB PDB | xray | resolution: 2.84 Å | in vitro · -175 °C · ligands CA, CL, K Crystal Structure of Nucleosome-H5 Linker Histone Assembly (sticky-169a DNA fragment) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-7XX6-1 RCSB PDB | xray | resolution: 3.39 Å | in vitro · -175 °C · ligands CA, K Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment) · Histone H3.1 (chains A,E,K,O,U,Y,e,i) | unmapped |
| EV-PDB-7XZX-1 RCSB PDB | cryoem | resolution: 4.53 Å | in vitro Cryo-EM structure of the nucleosome in complex with p53 DNA-binding domain · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7XZY-1 RCSB PDB | cryoem | resolution: 3.97 Å | in vitro Cryo-EM structure of the nucleosome containing 193 base-pair DNA with a p53 target sequence · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7XZZ-1 RCSB PDB | cryoem | resolution: 4.07 Å | in vitro Cryo-EM structure of the nucleosome in complex with p53 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7XX5-1 RCSB PDB | xray | resolution: 3.19 Å | in vitro · -175 °C · ligands CA Crystal Structure of Nucleosome-H1.3 Linker Histone Assembly (sticky-169a DNA fragment) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-7X8B-2 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C Crystal structure of ENL T1 mutant YEATS domain in complex with histone H3 acetylation at K27 · H3K27ac(24-27) peptide (chains B,D) | unmapped |
| EV-PDB-7V9S-1 RCSB PDB | cryoem | resolution: 11 Å | in vitro Telomeric trinucleosome in open state · Histone H3.1 (chains A,E,K,O,S,W) | unmapped |
| EV-PDB-7V9J-1 RCSB PDB | cryoem | resolution: 8 Å | in vitro Telomeric trinucleosome · Histone H3.1 (chains A,E,K,O,S,W) | unmapped |
| EV-PDB-7V9C-3 RCSB PDB | cryoem | resolution: 4.5 Å | in vitro Telomeric Dinucleosome in open state · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-7V90-1 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro Telomeric mononucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7LBQ-2 RCSB PDB | xray | resolution: 2.69 Å | in vitro · -173.15 °C · pH 7 · ligands ZN Crystal structure of human Survivin bound to histone H3 T3phK4me2 peptide · histone H3 T3phK4me2 peptide (chains E) | unmapped |
| EV-PDB-7LBO-2 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of human Survivin bound to histone H3 T3phK4me1 peptide · histone H3 T3phK4me1 peptide (chains C,F) | unmapped |
| EV-PDB-7EBK-2 RCSB PDB | xray | resolution: 1.74 Å | in vitro · -196.15 °C · ligands ZN Mouse Trim66 PHD-Bromo dual domain complexed with the H3(1-24)K9me3K18ac peptide · H3K9me3K18ac (chains B) | unmapped |
| EV-PDB-7E8D-1 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro · ligands SFG, ZN NSD2 E1099K mutant bound to nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7Y5V-2 RCSB PDB | cryoem | resolution: 6.1 Å | in vitro Cryo-EM structure of the dimeric human CAF1LC-H3-H4 complex · Histone H3.1 (chains D,I) | unmapped |
| EV-PDB-7ZI4-8 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ADP, BEF, ZN Cryo-EM structure of the human INO80 complex bound to a WT nucleosome · Histone H3.1 (chains I,M) | unmapped |
| EV-PDB-8DS8-2 RCSB PDB | xray | resolution: 1.84 Å | in vitro · -173.15 °C · pH 6.5 Crystal structure of human TNRC18 BAH domain in complex with H3K9me3 peptide · Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-8JHF-2 RCSB PDB | cryoem | resolution: 3.68 Å | in vitro · ligands SAM, ZN Native SUV420H1 bound to 167-bp nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JCD-1 RCSB PDB | cryoem | resolution: 3.14 Å | in vitro Human H2BFWTH100R nucleosome with 601 DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JCC-1 RCSB PDB | cryoem | resolution: 3.42 Å | in vitro Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JBX-1 RCSB PDB | cryoem | resolution: 3.35 Å | in vitro Human canonical 601 DNA nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8J6T-1 RCSB PDB | cryoem | resolution: 6.6 Å | in vitro Cryo-EM structure of the double CAF-1 bound right-handed Di-tetrasome · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-8J6S-1 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro Cryo-EM structure of the single CAF-1 bound right-handed Di-tetrasome · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-8IQG-2 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro Cryo-EM structure of the monomeric human CAF1-H3-H4 complex · Histone H3.1 (chains D) | unmapped |
| EV-PDB-8IQF-2 RCSB PDB | cryoem | resolution: 4.6 Å | in vitro Cryo-EM structure of the dimeric human CAF1-H3-H4 complex · Histone H3.1 (chains D,I) | unmapped |
| EV-PDB-8IJ0-2 RCSB PDB | xray | resolution: 1.52 Å | in vitro · -173.15 °C · ligands 1PE, GOL, SO4 Crystal structure of GAS41 YEATS domain in complex with H3K9ac peptide · Histone H3.1 (chains C,D) | unmapped |
| EV-PDB-8IIZ-2 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C · ligands GOL, branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K27ac peptide · Histone H3.1 (chains B,C) | unmapped |
| EV-PDB-8IIY-2 RCSB PDB | xray | resolution: 2.15 Å | in vitro · -173.15 °C · ligands GOL, branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K14ac peptide · Histone H3.1 (chains B,C) | unmapped |
| EV-PDB-8IHL-1 RCSB PDB | cryoem | resolution: 7.64 Å | in vitro Overlapping tri-nucleosome · Histone H3.1 (chains A,E,K,M,Q,U) | unmapped |
| EV-PDB-8IEJ-3 RCSB PDB | cryoem | resolution: 3.12 Å | in vitro · ligands ZN RNF20-RNF40/hRad6A-Ub/nucleosome complex · Histone H3.1 (chains E,K) | unmapped |
| EV-PDB-8IEG-1 RCSB PDB | cryoem | resolution: 3.44 Å | in vitro · ligands ZN Bre1(mRBD-RING)/Rad6-Ub/nucleosome complex · Histone H3.1 (chains E,K) | unmapped |
| EV-PDB-8I60-2 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · ligands GOL, SO4 Crystal structure of GAS41 YEATS domain in complex with histone H3K27cr · ALA-ARG-KCR-SER-ALA-PRO (chains A,B) | unmapped |
| EV-PDB-8HMX-2 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -193.15 °C WDR5 in complex with histone H3Q5his peptide · histone H3Q5his peptide (chains B) | unmapped |
| EV-PDB-8HLY-2 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 6.5 · ligands 2OP, EDO, GOL, ZN Crystal structure of SIRT3 in complex with H3K23la peptide · H3K23la peptide (chains B) | unmapped |
| EV-PDB-8HE5-18 RCSB PDB | cryoem | resolution: 6.95 Å | in vitro · ligands MG, ZN RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8HAN-1 RCSB PDB | cryoem | resolution: 4.2 Å | in vitro Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8HAM-1 RCSB PDB | cryoem | resolution: 4.5 Å | in vitro Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8HAL-1 RCSB PDB | cryoem | resolution: 4.4 Å | in vitro Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8HAK-1 RCSB PDB | cryoem | resolution: 4.5 Å | in vitro Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8HAJ-1 RCSB PDB | cryoem | resolution: 4.8 Å | in vitro Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8HAI-1 RCSB PDB | cryoem | resolution: 4.7 Å | in vitro Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8HAH-1 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8HAG-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8H1T-1 RCSB PDB | cryoem | resolution: 3 Å | in vitro Cryo-EM structure of BAP1-ASXL1 bound to chromatosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8H0W-16 RCSB PDB | cryoem | resolution: 4.6 Å | in vitro · ligands MG, ZN RNA polymerase II transcribing a chromatosome (type II) · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8H0V-16 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro · ligands MG, ZN RNA polymerase II transcribing a chromatosome (type I) · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8GUK-1 RCSB PDB | cryoem | resolution: 2.51 Å | in vitro Human nucleosome core particle (free form) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8GUJ-1 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro · ligands ZN Bre1-nucleosome complex (Model II) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8GUI-1 RCSB PDB | cryoem | resolution: 2.81 Å | in vitro · ligands ZN Bre1-nucleosome complex (Model I) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8GRM-1 RCSB PDB | cryoem | resolution: 3.05 Å | in vitro · ligands ZN Cryo-EM structure of PRC1 bound to H2AK119-UbcH5b-Ub nucleosome · Histone H3 (chains A,E) | unmapped |
| EV-PDB-8GE0-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · ligands ZN Crystal structure of JADE1 PZP domain in complex with Histone H3 · Histone H3.1,Protein Jade-1 (chains A,B,C) | unmapped |
| EV-PDB-8EVJ-3 RCSB PDB | cryoem | resolution: 4.1 Å | in vitro CX3CR1 nucleosome bound PU.1 and C/EBPa · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8EVI-3 RCSB PDB | cryoem | resolution: 2.64 Å | in vitro CX3CR1 nucleosome and PU.1 complex containing disulfide bond mutations · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8EVH-1 RCSB PDB | cryoem | resolution: 2.85 Å | in vitro CX3CR1 nucleosome and wild type PU.1 complex · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8EVG-1 RCSB PDB | cryoem | resolution: 2.75 Å | in vitro 162bp CX3CR1 nucleosome (further classified with better nucleosome end) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8DK5-1 RCSB PDB | cryoem | resolution: 2.71 Å | in vitro Structure of 187bp LIN28b nucleosome with site 0 mutation · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7YQK-1 RCSB PDB | cryoem | resolution: 3.38 Å | in vitro cryo-EM structure of gammaH2AXK15ub-H4K20me2 nucleosome bound to 53BP1 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-7YOZ-1 RCSB PDB | cryoem | resolution: 4.3 Å | in vitro Cryo-EM structure of human subnucleosome (intermediate form) · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-7Y8R-1 RCSB PDB | cryoem | resolution: 4.4 Å | in vitro · ligands ADP, BEF, MG The nucleosome-bound human PBAF complex · Histone H3 (chains A,E) | unmapped |
| EV-PDB-7Y61-1 RCSB PDB | cryoem | resolution: 5.6 Å | in vitro Cryo-EM structure of the two CAF1LCs bound right-handed Di-tetrasome · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-7Y60-1 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro Cryo-EM structure of human CAF1LC bound right-handed Di-tetrasome · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-7Y5W-1 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro Cryo-EM structure of the left-handed Di-tetrasome · Histone H3.1 (chains A,C,E,G) | unmapped |
| EV-PDB-7Y5U-2 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro Cryo-EM structure of the monomeric human CAF1LC-H3-H4 complex · Histone H3.1 (chains D) | unmapped |
| EV-PDB-7Y00-1 RCSB PDB | cryoem | resolution: 3.96 Å | in vitro Cryo-EM structure of the nucleosome containing 169 base-pair DNA with a p53 target sequence · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JND-1 RCSB PDB | cryoem | resolution: 3.66 Å | in vitro The cryo-EM structure of the nonameric RAD51 ring bound to the nucleosome with the linker DNA binding · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JNE-1 RCSB PDB | cryoem | resolution: 4.68 Å | in vitro The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome without the linker DNA binding · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JNF-1 RCSB PDB | cryoem | resolution: 6.91 Å | in vitro The cryo-EM structure of the RAD51 filament bound to the nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8OOP-9 RCSB PDB | cryoem | resolution: 2.7 Å | in vitro · ligands ADP, ALF, ATP, MG CryoEM Structure INO80core Hexasome complex composite model state2 · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-8OSK-1 RCSB PDB | cryoem | resolution: 3.6 Å | in vitro Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (composite map) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8Q3X-1 RCSB PDB | xray | resolution: 2.301 Å | in vitro · -175.15 °C · ligands AU, MG, XIS Structure of Nucleosome Core with a Bound Metallopeptide Conjugate (Kaposi Sarcoma Associated Herpesvirus LANA Peptide-Au[I] Compound) · Histone H3.1 (chains AAA,EEE) | unmapped |
| EV-PDB-8U13-1 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A lysine 15 in complex with RNF168-UbcH5c (class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8TXX-1 RCSB PDB | cryoem | resolution: 3.7 Å | in vitro Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex with RNF168 (Class 3) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8TXW-1 RCSB PDB | cryoem | resolution: 3.6 Å | in vitro Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex with RNF168 (Class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8TXV-1 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex with RNF168 (Class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SYP-1 RCSB PDB | cryoem | resolution: 2.6 Å | in vitro Genomic CX3CR1 nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SWI-2 RCSB PDB | xray | resolution: 3 Å | in vitro · -173.15 °C · ligands SAH Crystal structure of legAS4 from Legionella pneumophila subsp. pneumophila with histone H3 (1-12)peptide · Histone H3 peptided (chains B) | unmapped |
| EV-PDB-8SPU-4 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro Structure of ESRRB nucleosome bound OCT4 at site c · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SPS-4 RCSB PDB | cryoem | resolution: 3 Å | in vitro High resolution structure of ESRRB nucleosome bound OCT4 at site a and site b · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SNA-1 RCSB PDB | cryoem | resolution: 4 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c with backside ubiquitin (UbcH5c chemically conjugated to histone H2A) (class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN9-1 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c with backside ubiquitin (UbcH5c chemically conjugated to histone H2A) (class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN8-1 RCSB PDB | cryoem | resolution: 3.7 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A) (class 6) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN7-1 RCSB PDB | cryoem | resolution: 3.7 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A) (class 5) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN6-1 RCSB PDB | cryoem | resolution: 3.7 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A) (class 4) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN5-1 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A) (class 3) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN4-1 RCSB PDB | cryoem | resolution: 3.7 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A) (class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN3-1 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A) (class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN2-1 RCSB PDB | cryoem | resolution: 3.6 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c (UbcH5c chemically conjugated to histone H2A) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN1-1 RCSB PDB | cryoem | resolution: 3.3 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (class 6) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SN0-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (class 5) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SMZ-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (Class 4) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SMY-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (class 3) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SMX-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8SMW-1 RCSB PDB | cryoem | resolution: 3.3 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8RGM-1 RCSB PDB | cryoem | resolution: 4 Å | in vitro Cryo-EM structure of nucleosome containing Widom603 DNA · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8QKT-1 RCSB PDB | xray | resolution: 3.261 Å | in vitro · -173.15 °C · ligands MN Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment · Histone H3.1 (chains AAA,EEE,KKK,OOO) | unmapped |
| EV-PDB-8Q3M-1 RCSB PDB | xray | resolution: 2.503 Å | in vitro · -175.15 °C · ligands MG Structure of Nucleosome Core with a Bound Kaposi Sarcoma Associated Herpesvirus LANA Peptide Having a Methionine to Ornithine Substitution · Histone H3.1 (chains AAA,EEE) | unmapped |
| EV-PDB-8Q3E-2 RCSB PDB | xray | resolution: 2.174 Å | in vitro · -175.15 °C · ligands MG High Resolution Structure of Nucleosome Core with Bound Foamy Virus GAG Peptide · Histone H3.1 (chains AAA,EEE) | unmapped |
| EV-PDB-8Q36-2 RCSB PDB | xray | resolution: 2.604 Å | in vitro · -175.15 °C · ligands MG Structure of Nucleosome Core with a Bound Metallopeptide Conjugate (Foamy Virus GAG Peptide-Au[I] Compound) · Histone H3.1 (chains AAA,EEE) | unmapped |
| EV-PDB-8OX1-1 RCSB PDB | cryoem | resolution: 2.7 Å | in vitro Structure of TRF1core in complex with telomeric nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8OX0-1 RCSB PDB | cryoem | resolution: 2.52 Å | in vitro Structure of apo telomeric nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8OTT-1 RCSB PDB | cryoem | resolution: 3.3 Å | in vitro · ligands PTD MYC-MAX bound to a nucleosome at SHL+5.8 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8OTS-1 RCSB PDB | cryoem | resolution: 3.3 Å | in vitro · ligands PTD OCT4 and MYC-MAX co-bound to a nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8OSL-1 RCSB PDB | cryoem | resolution: 4.9 Å | in vitro Cryo-EM structure of CLOCK-BMAL1 bound to the native Por enhancer nucleosome (map 2, additional 3D classification and flexible refinement) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8OSJ-1 RCSB PDB | cryoem | resolution: 6.2 Å | in vitro Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8OOS-4 RCSB PDB | cryoem | resolution: 3.29 Å | in vitro · ligands ADP, ALF, MG CryoEM Structure INO80core Hexasome complex ATPase-hexasome refinement state 2 · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-8OOA-3 RCSB PDB | cryoem | resolution: 3.18 Å | in vitro CryoEM Structure INO80core Hexasome complex Hexasome refinement state1 · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-8OO7-9 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro · ligands ADP, ALF, ATP, MG CryoEM Structure INO80core Hexasome complex composite model state1 · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-8OFF-2 RCSB PDB | cryoem | resolution: 3.4 Å | in vitro Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes (Map1) · Histone H3.1 (chains Ca,Cb) | unmapped |
| EV-PDB-8KE0-1 RCSB PDB | cryoem | resolution: 4 Å | in vitro Structure of H1.2 bound to the nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8KD1-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro Structure of nucleosome complexed with one DEK molecule · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8KCY-1 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro Structure of nucleosome complexed with two DEK molecules · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JLA-1 RCSB PDB | cryoem | resolution: 3.44 Å | in vitro Cryo-EM structure of the human nucleosome lacking N-terminal region of H2A, H2B, H3, and H4 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JL9-1 RCSB PDB | cryoem | resolution: 2.65 Å | in vitro Cryo-EM structure of the human nucleosome with scFv · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8JHG-2 RCSB PDB | cryoem | resolution: 3.58 Å | in vitro · ligands SAM, ZN Native SUV420H1 bound to 167-bp nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8U14-1 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A lysine 15 in complex with RNF168-UbcH5c (class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8UBJ-1 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro Cryo-EM structure of NRCAM nucleosome aided by scFv (3D Flex map) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8VG1-1 RCSB PDB | cryoem | resolution: 2.48 Å | in vitro · ligands ZN Cryo-EM structure of FoxA1 and GATA4 in complex with ALBN1 nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8VNV-8 RCSB PDB | cryoem | resolution: 3.1 Å | in vitro · ligands SAH PRC2_AJ1-450 bound to H3K36me3 with histone H3 tail engaged · H3K36me3-modified histone H3 (chains I) | unmapped |
| EV-PDB-8X15-3 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ADP, ATP Structure of nucleosome-bound SRCAP-C in the apo state · Histone H3.1 (chains C,G) | unmapped |
| EV-PDB-8X19-3 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ADP, ATP, BEF, MG Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state · Histone H3.1 (chains C,G) | unmapped |
| EV-PDB-8X1C-3 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ADP, ATP Structure of nucleosome-bound SRCAP-C in the ADP-bound state · Histone H3.1 (chains C,G) | unmapped |
| EV-PDB-8XBT-1 RCSB PDB | cryoem | resolution: 4.12 Å | in vitro The cryo-EM structure of the octameric RAD51 ring bound to the nucleosome with the linker DNA binding · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8YBJ-1 RCSB PDB | cryoem | resolution: 2.38 Å | in vitro Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9GE4-3 RCSB PDB | cryoem | resolution: 3.52 Å | in vitro CryoEM structure of the human INO80 core- H2A.Z nucleosome complex · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-9GCG-9 RCSB PDB | cryoem | resolution: 3.43 Å | in vitro · ligands ADP, ATP, ZN CryoEM structure of the human INO80 core- H2A.Z nucleosome complex · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-9FH9-2 RCSB PDB | cryoem | resolution: 2.5 Å | in vitro Structure of CyclinB1 N-terminus bound to the NCP · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9FGQ-2 RCSB PDB | cryoem | resolution: 2.5 Å | in vitro Structure of human APC3loop 375-381 bound to the NCP · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9EHI-2 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · ligands MES Crystal structure of ENL YEATS in complex with histone H3 methacrylated at K18 · Histone H3.1 (chains Q,R,S,T,U,V,W,X,Y,Z,a,b,c,d,e,f) | unmapped |
| EV-PDB-9ECP-1 RCSB PDB | cryoem | resolution: 1.91 Å | in vitro Structure of the native human NCP purified from HEK293 cells · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9A9W-1 RCSB PDB | integrative | structure | in vitro · ligands ZN USP7 bound to a nucleosome/p53 complex · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9A8I-5 RCSB PDB | integrative | structure | in vitro Integrative structure of the human WDR76-SPIN1-Nucleosome complex · Histone H3.1 (chains G,H) | unmapped |
| EV-PDB-9A3P-1 RCSB PDB | integrative | structure | in vitro CLOCK-BMAL1 bound to the native Por nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9A3O-1 RCSB PDB | integrative | structure | in vitro CLOCK-BMAL1 bound to a nucleosome at SHL -6.2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9A0K-13 RCSB PDB | integrative | structure | in vitro A structural model of the endogenoushuman SWI/SNF (BAF) complex bound to the nucleosome informs disease mechanisms · H3 (chains X,x) | unmapped |
| EV-PDB-8YV8-1 RCSB PDB | cryoem | resolution: 3 Å | in vitro · ligands ZN Cryo-EM structure of CDCA7 bound to nucleosome including hemimethylated CpG site in Widom601 positioning sequence. · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8YTI-1 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -175.15 °C · ligands CA, CL, K Crystal Structure of Nucleosome-H1x Linker Histone Assembly (sticky-169a DNA fragment) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-8YNY-1 RCSB PDB | cryoem | resolution: 4.52 Å | in vitro Structure of Cas9-sgRNA ribonucleoprotein bound to nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8YJM-3 RCSB PDB | xray | resolution: 4.15 Å | in vitro · -173.15 °C Structure of human SPT16 MD-CTD and MCM2 HBD chaperoning a histone H3-H4 tetramer and a single chain H2B-H2A chimera · Histone H3.1 (chains C,E) | unmapped |
| EV-PDB-8YJF-3 RCSB PDB | xray | resolution: 4.4 Å | in vitro · -173.15 °C Structure of human SPT16 MD-CTD and MCM2 HBD chaperoning a histone H3-H4 tetramer and an H2A-H2B dimer · Histone H3.1 (chains C,E) | unmapped |
| EV-PDB-8YBK-1 RCSB PDB | cryoem | resolution: 2.69 Å | in vitro Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8Y3F-1 RCSB PDB | cryoem | resolution: 4.54 Å | in vitro Cryo-EM structure of the overlapping di-nucleosome (intermediate form1) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-8Y3E-1 RCSB PDB | cryoem | resolution: 5.32 Å | in vitro Cryo-EM structure of the overlapping di-nucleosome (open form) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-8Y3D-1 RCSB PDB | cryoem | resolution: 5.1 Å | in vitro Cryo-EM structure of the overlapping di-nucleosome (intermediate form2) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-8Y3C-1 RCSB PDB | cryoem | resolution: 5.21 Å | in vitro Cryo-EM structure of the overlapping di-nucleosome (closed form) · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-8XVS-16 RCSB PDB | cryoem | resolution: 4.1 Å | in vitro · ligands MG, ZN RNA polymerase II elongation complex with downstream nucleosome extracted from human nuclei · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8XRJ-16 RCSB PDB | cryoem | resolution: 3.6 Å | in vitro · ligands MG, ZN RNA polymerase II elongation complex with upstream nucleosome extracted from human nuclei · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8XBW-1 RCSB PDB | cryoem | resolution: 2.89 Å | in vitro The cryo-EM structure of the RAD51 N-terminal lobe domain bound to the histone H4 tail of the nucleosome · Histone H3.1 (chains E) | unmapped |
| EV-PDB-8XBU-1 RCSB PDB | cryoem | resolution: 4.24 Å | in vitro The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome with the linker DNA binding · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8WG5-2 RCSB PDB | cryoem | resolution: 3.05 Å | in vitro Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8W9F-5 RCSB PDB | cryoem | resolution: 4.4 Å | in vitro · ligands ZN Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 3 · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8W9E-5 RCSB PDB | cryoem | resolution: 3.6 Å | in vitro · ligands K, ZN Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 2 · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8W9D-5 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro · ligands K, ZN Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 1 · Histone H3.1 (chains a,e) | unmapped |
| EV-PDB-8VML-4 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro PRC2_AJ1-450 bound to H3K4me3 · Histone H3 (chains I) | unmapped |
| EV-PDB-8VMI-2 RCSB PDB | cryoem | resolution: 3.1 Å | in vitro · ligands ZN PRC2_AJ119-450 bound to H3K4me3 · Histone H3.1 (chains B) | unmapped |
| EV-PDB-8VLR-1 RCSB PDB | cryoem | resolution: 2.6 Å | in vitro Cryo-EM structure of native H2AK119bu nucleosome at 2.6 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8VG2-1 RCSB PDB | cryoem | resolution: 3.04 Å | in vitro Cryo-EM structure of FoxA1 and GATA4 in complex with H14 chromatosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8VG0-3 RCSB PDB | cryoem | resolution: 3.07 Å | in vitro · ligands ZN Cryo-EM structure of GATA4 in complex with ALBN1 nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8VFZ-5 RCSB PDB | cryoem | resolution: 4.1 Å | in vitro Cryo-EM structure of FoxA1 in complex with ALBN1 nucleosome (class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8VFY-1 RCSB PDB | cryoem | resolution: 2.89 Å | in vitro Cryo-EM structure of FoxA1 in complex with ALBN1 nucleosome (class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8VFX-1 RCSB PDB | cryoem | resolution: 2.65 Å | in vitro Cryo-EM structure of 186bp ALBN1 nucleosome aided by scFv · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8UPF-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands ZN Cryo-EM structure of the human nucleosome core particle in complex with RNF168-UbcH5c · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8UBL-1 RCSB PDB | cryoem | resolution: 2.8 Å | in vitro Cryo-EM structure of Ascl1/E12a in complex with NRCAM nucleosome (3D Flex map) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8UBK-1 RCSB PDB | cryoem | resolution: 2.6 Å | in vitro Cryo-EM structure of Ascl1/E12a in complex with NRCAM nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-8U9S-1 RCSB PDB | cryoem | resolution: 2.6 Å | in vitro Cryo-EM structure of NRCAM nucleosome aided by scFv · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9GE5-9 RCSB PDB | cryoem | resolution: 3.35 Å | in vitro · ligands ADP, ATP, ZN CryoEM structure of the human INO80-Hexasome complex · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-9GEL-3 RCSB PDB | cryoem | resolution: 4.86 Å | in vitro CryoEM structure of the human INO80-Hexasome complex · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-9GEV-6 RCSB PDB | cryoem | resolution: 3.47 Å | in vitro · ligands ADP, ATP CryoEM structure of the human INO80 core-nucleosome complex state N-6 · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-9GF6-3 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro CryoEM structure of the human INO80 core-nucleosome complex state N-6 · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-9GFB-9 RCSB PDB | cryoem | resolution: 3.55 Å | in vitro · ligands ADP, ATP, ZN CryoEM structure of the human INO80 core-nucleosome complex state N-7 · Histone H3.1 (chains M,Q) | unmapped |
| EV-PDB-9GFM-4 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro CryoEM structure of the human INO80 core-nucleosome complex state N-7 · Histone H3.1 (chains M) | unmapped |
| EV-PDB-9GFM-8 RCSB PDB | cryoem | resolution: 3.8 Å | in vitro CryoEM structure of the human INO80 core-nucleosome complex state N-7 · Histone H3.1 (chains Q) | unmapped |
| EV-PDB-9IGW-1 RCSB PDB | cryoem | resolution: 3.32 Å | in vitro Ku70/80 bound to 147 bp nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9IGX-5 RCSB PDB | cryoem | resolution: 3.56 Å | in vitro Ku70/80 bound to 153 bp nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9J8M-1 RCSB PDB | cryoem | resolution: 3.82 Å | in vitro Cryo-EM structure of BAF-Lamin A/C IgF-nucleosome complex (High mobility complex) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9J8N-1 RCSB PDB | cryoem | resolution: 7.14 Å | in vitro Cryo-EM structure of BAF-Lamin A/C IgF-nucleosome complex (Low mobility complex) · Histone H3.1 (chains A,E,a,e) | unmapped |
| EV-PDB-9J8O-1 RCSB PDB | cryoem | resolution: 4.05 Å | in vitro Cryo-EM structure of BAF-Lamin A/C IgF-H1-nucleosome complex · Histone H3.1 (chains A,E,a,e) | unmapped |
| EV-PDB-9J8W-1 RCSB PDB | cryoem | resolution: 3.38 Å | in vitro Cryo-EM structure of NCP-UV-DDB complex containing CPD · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9JC6-1 RCSB PDB | cryoem | resolution: 3.34 Å | in vitro Human H2BW2 nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9MLL-1 RCSB PDB | cryoem | resolution: 3.7 Å | in vitro GammaH2AX containing nucleosomes, Parallel stack · Histone H3.1 (chains A,E,L,P) | unmapped |
| EV-PDB-9MLN-1 RCSB PDB | cryoem | resolution: 3.3 Å | in vitro GammaH2AX containing nucleosome, Canonical (Class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9MLR-1 RCSB PDB | cryoem | resolution: 3.1 Å | in vitro GammaH2AX containing nucleosome, Half-wrapped (Class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9MLS-1 RCSB PDB | cryoem | resolution: 3.6 Å | in vitro GammaH2AX containing nucleosome, Extended (Class 3) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9MMK-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro H2AX containing nucleosome, Canonical (Class 1) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9MMM-1 RCSB PDB | cryoem | resolution: 4 Å | in vitro H2AX containing nucleosomes, Parallel stack · Histone H3.1 (chains A,E,L,P) | unmapped |
| EV-PDB-9MMO-1 RCSB PDB | cryoem | resolution: 3.9 Å | in vitro H2AX containing nucleosomes, Right offset stack · Histone H3.1 (chains A,E,L,P) | unmapped |
| EV-PDB-9MMT-1 RCSB PDB | cryoem | resolution: 3.4 Å | in vitro H2AX containing nucleosome, Unwrapped (Class 2) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9Q8X-5 RCSB PDB | cryoem | resolution: 2.94 Å | in vitro Ku70/80 bound to a 153 bp H2AX nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9Q9F-8 RCSB PDB | cryoem | resolution: 4.54 Å | in vitro DNA-PK bound to a 153 bp H2AX nucleosome model 1 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9QCR-6 RCSB PDB | cryoem | resolution: 4.37 Å | in vitro DNA-PK bound to 153 bp H2AX nucleosome model 2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9QCS-4 RCSB PDB | cryoem | resolution: 4.38 Å | in vitro Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome · Histone H3.1 (chains A,E,a,e) | unmapped |
| EV-PDB-9QMS-5 RCSB PDB | cryoem | resolution: 5 Å | in vitro DNA-PK bound to 153 bp H2AX nucleosome with ATPyS · Histone H3.1 (chains A,E,a,e) | unmapped |
| EV-PDB-9R04-1 RCSB PDB | cryoem | resolution: 4.2 Å | in vitro p53 bound to the nucleosome at position SHL-5.7 (crosslinked sample) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9R2M-1 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro p53 bound to nucleosome at position SHL+5.9 (non-crosslinked sample, composite map) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9R2P-1 RCSB PDB | cryoem | resolution: 4.18 Å | in vitro p53 bound to nucleosome at position SHL+5.9 (crosslinked sample) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9R2Q-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro p53 bound to nucleosome at position SHL-5.7 (non-crosslinked sample) · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9R2U-1 RCSB PDB | cryoem | resolution: 3.2 Å | in vitro · ligands COA, ZN Drosophila MSL HAT nucleosome complex H4K16ac post-catalytic state · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9R2W-1 RCSB PDB | cryoem | resolution: 3.4 Å | in vitro Drosophila MSL HAT nucleosome complex H3K36me3 reader state · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9R2Y-1 RCSB PDB | cryoem | resolution: 3.4 Å | in vitro · ligands COA, ZN Drosophila MSL HAT nucleosome complex H4K16ac postcatalytic H3K36me3 reader state · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9RL4-1 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro · ligands PTD, ZN Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL-6 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9RMC-1 RCSB PDB | cryoem | resolution: 4.2 Å | in vitro · ligands ZN Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 1 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9RN1-1 RCSB PDB | cryoem | resolution: 5.9 Å | in vitro Structure of BAF-nucleosome complex with OCT4-SOX2 at SHL+6 in ADP-bound state, BAF47 bound to ATPase lobe 2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9RN2-1 RCSB PDB | cryoem | resolution: 4.1 Å | in vitro Structure of BAF in complex with OCT4-SOX2-bound nucleosome - SHL+6 class 2 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9UJS-16 RCSB PDB | cryoem | resolution: 3.62 Å | in vitro RNA polymerase II elongation complex stalled at SHL(-4) of the H3-H4 octasome · Histone H3.1 (chains a,c,e,g) | unmapped |
| EV-PDB-9UZ7-2 RCSB PDB | cryoem | resolution: 3.24 Å | in vitro Cryo-EM structure of the nucleosome core particle with site-specific DNA-histone crosslinking · Histone H3.1 (chains B) | unmapped |
| EV-PDB-9UZ7-1 RCSB PDB | cryoem | resolution: 3.24 Å | in vitro Cryo-EM structure of the nucleosome core particle with site-specific DNA-histone crosslinking · Histone H3.1 (chains A) | unmapped |
| EV-PDB-9V6Q-1 RCSB PDB | cryoem | resolution: 4.6 Å | in vitro · ligands ZN Cryo-EM structure of two cPRC1 complexes bound to opposite faces of an endogenous 147-bp mono-nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9V6S-1 RCSB PDB | cryoem | resolution: 3 Å | in vitro · ligands ZN Cryo-EM structure of a single cPRC1 complex engaged on one face of an endogenous 147-bp mononucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9V6X-1 RCSB PDB | cryoem | resolution: 4 Å | in vitro · ligands ZN Cryo-EM structure of the cPRC1 complex bound to an endogenous 184-bp mono-nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9V8L-1 RCSB PDB | cryoem | resolution: 6.6 Å | in vitro · ligands ZN Cryo-EM structure of the cPRC1-di-nucleosome (loose) complex · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9V9H-1 RCSB PDB | cryoem | resolution: 4.5 Å | in vitro · ligands ZN Cryo-EM structure of the cPRC1-di-nucleosome (tight) complex · Histone H3.1 (chains A,E,K,M) | unmapped |
| EV-PDB-9V9P-1 RCSB PDB | cryoem | resolution: 3.4 Å | in vitro · ligands ZN Cryo-EM structure of the cPRC1-di-nucleosome (CBX7) complex · Histone H3.1 (chains A,E,K,M) | unmapped |
| EV-PDB-9VEM-2 RCSB PDB | xray | resolution: 2.57 Å | in vitro · -173.15 °C · ligands EDO, GOL, MYR, NAD, PEG, ZN SIRT2 structure in complex with H3K18myr peptide and native NAD: pre-catalysis state 1 · Histone H3.1 (chains C) | unmapped |
| EV-PDB-9VEW-2 RCSB PDB | xray | resolution: 2.68 Å | in vitro · -173.15 °C · ligands EDO, GOL, MYR, NAD, ZN SIRT2 structure in complex with H3K18myr peptide and native NAD: pre-catalysis state 2 · Histone H3.1 (chains C) | unmapped |
| EV-PDB-9UJT-16 RCSB PDB | cryoem | resolution: 6.54 Å | in vitro RNA polymerase II elongation complex stalled at SHL(-0.5) of the H3-H4 octasome (tetrasome) · Histone H3.1 (chains e,g) | unmapped |
| EV-PDB-9Q80-5 RCSB PDB | cryoem | resolution: 3.39 Å | in vitro Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9MMN-1 RCSB PDB | cryoem | resolution: 3.6 Å | in vitro H2AX containing nucleosomes, Left offset stack · Histone H3.1 (chains A,E,L,P) | unmapped |
| EV-PDB-9VG0-2 RCSB PDB | xray | resolution: 1.61 Å | in vitro · -173.15 °C · ligands EDO, MYR, ZN SIRT2 structure in complex with H3K18myr peptide · Histone H3.1 (chains C) | unmapped |
| EV-PDB-9VG3-2 RCSB PDB | xray | resolution: 2.15 Å | in vitro · -173.15 °C · pH 8 · ligands EDO, MYR, ZN SIRT2 structure in complex with H3K18myr peptide: pre NAD binding state · Histone H3.1 (chains C) | unmapped |
| EV-PDB-9VGE-2 RCSB PDB | xray | resolution: 2.56 Å | in vitro · -173.15 °C · pH 8 · ligands GOL, NCA, YDD, ZN SIRT2 demyristoylation intermediate I structure · Histone H3.1 (chains C) | unmapped |
| EV-PDB-9VGZ-2 RCSB PDB | xray | resolution: 2.34 Å | in vitro · -173.15 °C · pH 8 · ligands EDO, MYR, NAD, PEG, ZN SIRT2-F96A structure in complex with H3K18myr peptide and native NAD · Histone H3.1 (chains C) | unmapped |
| EV-PDB-9W6E-1 RCSB PDB | cryoem | resolution: 3.7 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer assembled with DNA truncated at SHL-4.5 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9W6F-1 RCSB PDB | cryoem | resolution: 3.56 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle trimer assembled with DNA truncated at SHL-4.5 · Histone H3.1 (chains A,E,K,O,U,Y) | unmapped |
| EV-PDB-9W6G-1 RCSB PDB | cryoem | resolution: 4.02 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle tetramer assembled with DNA truncated at SHL-4.5 · Histone H3.1 (chains A,E,K,O,U,Y,e,i) | unmapped |
| EV-PDB-9W6H-1 RCSB PDB | cryoem | resolution: 7.61 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 3) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9W6I-1 RCSB PDB | cryoem | resolution: 7.61 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 4) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9W6J-1 RCSB PDB | cryoem | resolution: 7.62 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 1, top NCP) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9W6K-1 RCSB PDB | cryoem | resolution: 3.71 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 1&2, bottom NCP) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9W6L-1 RCSB PDB | cryoem | resolution: 6.26 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 2, top NCP) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9W6M-1 RCSB PDB | cryoem | resolution: 4.86 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 5, top NCP) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9W6N-1 RCSB PDB | cryoem | resolution: 7.61 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 5, bottom NCP) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9W6O-1 RCSB PDB | cryoem | resolution: 4.08 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 6, top NCP) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9W6Q-1 RCSB PDB | cryoem | resolution: 3.43 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle trimer assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E,K,O,U,Y) | unmapped |
| EV-PDB-9W6T-1 RCSB PDB | cryoem | resolution: 7.61 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 5) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9W72-1 RCSB PDB | cryoem | resolution: 7.62 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 1) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9W73-1 RCSB PDB | cryoem | resolution: 6.26 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 2) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9XSF-1 RCSB PDB | cryoem | resolution: 3.39 Å | in vitro · ligands NAG Cryo-EM structure of H4S47GlcNAc nucleosome at 3.39 angstrom · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9YL3-3 RCSB PDB | cryoem | resolution: 3.5 Å | in vitro State 1 MLL4FC bound to a nucleosome premodified with H2BK120ub and H4K16ac · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9YLE-5 RCSB PDB | cryoem | resolution: 3.63 Å | in vitro State 3 MLL4FC bound to a nucleosome premodified with H2BK120ub and H4K16ac · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9YLY-1 RCSB PDB | cryoem | resolution: 3.77 Å | in vitro · ligands SAH, ZN MLL4FC bound to a nucleosome with p53 RE · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9YM8-4 RCSB PDB | cryoem | resolution: 3.43 Å | in vitro · ligands SAH, ZN State 2 focused on PHD FYR of MLL4FC bound to a nucleosome premodified with H2BK120ub and H4K16ac · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9YMF-4 RCSB PDB | cryoem | resolution: 3.45 Å | in vitro · ligands SAH, ZN State 2 focused on H3 N terminal tail of MLL4FC bound to a nucleosome premodified with H2BK120ub and H4K16ac · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9ZEO-3 RCSB PDB | cryoem | resolution: 3.1 Å | in vitro Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9W71-1 RCSB PDB | cryoem | resolution: 5.52 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 6) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E,K,O) | unmapped |
| EV-PDB-9W6P-1 RCSB PDB | cryoem | resolution: 5.52 Å | in vitro Cryo-EM structure of a stacked human nucleosome core particle dimer (type 6, bottom NCP) assembled with DNA truncated at SHL-5.5 · Histone H3.1 (chains A,E) | unmapped |
| EV-PDB-9VH0-2 RCSB PDB | xray | resolution: 2.41 Å | in vitro · -173.15 °C · pH 5.5 · ligands MYR, NAD, ZN SIRT2-H187A structure in complex with H3K18myr peptide and native NAD · Histone H3.1 (chains C,D) | unmapped |
| EV-BMRB-11115 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7 Complex structure of the zf-CW domain and the H3K4me3 peptide · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-17569 BMRB | nmr_shifts | chemical_shift | in vitro · 26.85 °C · pH 7 Solution structure of the ADD domain of ATRX complexed with histone tail H3 1-15 K9me3 · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-17808 BMRB | nmr_shifts | chemical_shift | in vitro · 19.85 °C · pH 7.4 Structure of PHD domain of UHRF1 in complex with H3 peptide · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-18764 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7 Phf19 links methylated lysine 36 of histone H3 to regulation of Polycomb activity · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-18813 BMRB | nmr_shifts | chemical_shift | in vitro · -0.15 °C · pH 7 The solution structure of human PHF1 in complex with H3K36me3 · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-26059 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7.4 Solution NMR structures of AF9 yeats domain in complex with histon H3 acetylation at K18 · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-26060 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7.4 Solution NMR structures of AF9 yeats domain in complex with histone H3 crotonylation at K18 · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-30177 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7 Solution NMR structure of PHF20 PHD domain in complex with a histone H3K4me2 peptide · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-30501 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7 Solution structure of ZZZ3 ZZ domain in complex with histone H3 tail · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-30502 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7 Solution structure of ZZZ3 ZZ domain in complex with histone H3K4ac peptide · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-BMRB-30809 BMRB | nmr_shifts | chemical_shift | in vitro · 24.85 °C · pH 7.5 Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-SASBDB-SASDNS7 SASBDB | saxs_sans | radius_of_gyration: 4.41 nm ± 0.047 | in vitro · 20 °C · pH 7.5 · ligands partner: Histone H4, partner: Peptidyl-prolyl cis-trans isomerase FKBP43 The plant nucleoplasmin AtFKBP43 needs its extended arms for histone interaction. · Histone H3.1 with Peptidyl-prolyl cis-trans isomerase FKBP43, Histone H4 | unmapped |
| EV-SASBDB-SASDVU2 SASBDB | saxs_sans | radius_of_gyration: 4.89 nm ± 0.181 | in vitro · 20 °C · pH 7.5 · ligands partner: Histone H4, partner: PfNPM A3 (1-170) Plasmodium falciparum nucleoplasmin (PfNPM) · Histone H3.1 with PfNPM A3 (1-170), Histone H4 | unmapped |
| EV-AFDB-AF-P68431-F1 AlphaFold DB | af_prediction | plddt: 86.06 pLDDT | in silico AlphaFold DB prediction AF-P68431-F1 · AlphaFold Monomer v2.0 pipeline, residues 1-136 | unmapped |
| EV-SMASH-SMFS-000002 SMASH-BIO | force_spectroscopy | study_record | in vitro A Nanomechanical Fingerprint of Centromeric Methylation Co-Localization in TNBC Chromosomal Instability · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-000051 SMASH-BIO | force_spectroscopy | study_record | in vitro Chromatin mechanics and regulatory protein function: insights from single-molecule force spectroscopy. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000064 SMASH-BIO | force_spectroscopy | study_record | in vitro Counteraction of HMGB1 at ss-dsDNA junctions maintains liquidity of protamine-DNA co-condensates · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-000065 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 8 Counteraction of HMGB1 at ss-dsDNA junctions maintains liquidity of protamine-DNA co-condensates. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-000127 SMASH-BIO | force_spectroscopy | study_record | in vitro Histone N-terminal tails act as electrostatic clamps to mechanically stabilize nucleosomes · Core histones; nanopore force; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000138 SMASH-BIO | force_spectroscopy | study_record | in vitro Insights from single-molecule force spectroscopy into chromatin topology. · Core histones; afm smfs; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-000195 SMASH-BIO | force_spectroscopy | study_record | in vitro Molecular Crowding-Driven Nucleosome Interactions Revealed Through Single-Molecule Optical Tweezers · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000445 SMASH-BIO | force_spectroscopy | study_record | in vitro FACT weakens the nucleosomal barrier to transcription and preserves its integrity by forming a hexasome-like intermediate. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000492 SMASH-BIO | force_spectroscopy | study_record | in vitro MODULATION OF ARCHAEAL HYPERNUCLEOSOME STRUCTURE AND STABILITY BY Mg 2+ · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-000516 SMASH-BIO | force_spectroscopy | study_record | in vitro Modulation of Archaeal Hypernucleosome Structure and Stability by Mg2. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-000590 SMASH-BIO | force_spectroscopy | study_record | in vitro Roles of histone chaperone Nap1 and histone acetylation in regulating phase-separation of chromatin arrays · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-000591 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Roles of histone chaperone Nap1 and histone acetylation in regulating phase-separation of nucleosome arrays. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-000728 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 8 Dependence of nucleosome mechanical stability on DNA mismatches. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000758 SMASH-BIO | force_spectroscopy | study_record | in vitro Epigenetic Histone Modifications H3K36me3 and H4K5/8/12/16ac Induce Open Polynucleosome Conformations via Different Mechanisms. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000759 SMASH-BIO | force_spectroscopy | study_record | in vitro Epigenetic histone modifications H3K36me3 and H4K5/8/12/16ac induce open polynucleosome conformations via different mechanisms · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000874 SMASH-BIO | force_spectroscopy | study_record | in vitro Nucleosome Dynamics Derived at the Single-Molecule Level Bridges Its Structures and Functions. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication, unfolding_protein | unmapped |
| EV-SMASH-SMFS-000904 SMASH-BIO | force_spectroscopy | study_record | in vitro Protamine-Mediated Tangles Produce Extreme Deoxyribonucleic Acid Compaction. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000911 SMASH-BIO | force_spectroscopy | study_record | in vitro Quantifying ATP-Independent Nucleosome Chaperone Activity with Single-Molecule Methods. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-000983 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 9.4 The condensation of HP1α/Swi6 imparts nuclear stiffness. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-001204 SMASH-BIO | force_spectroscopy | study_record | in vitro Ion-mediated condensation controls the mechanics of mitotic chromosomes · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-001238-r0 SMASH-BIO | force_spectroscopy | step_size: 50 nm | in vitro Micromechanical Study of Hyperacetylated Nucleosomes Using Single Molecule Transverse Magnetic Tweezers. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, receptor_ligand_adhesion, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001238-r1 SMASH-BIO | force_spectroscopy | unbinding_force: 2.5 pN | in vitro Micromechanical Study of Hyperacetylated Nucleosomes Using Single Molecule Transverse Magnetic Tweezers. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, receptor_ligand_adhesion, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001248 SMASH-BIO | force_spectroscopy | study_record | in vitro Multiple modes of DNA compaction by protamine · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001326 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Single-molecule study reveals Hmo1, not Hho1, promotes chromatin assembly in budding yeast. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-001351 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 The Histone Chaperones SET/TAF-1β and NPM1 Exhibit Conserved Functionality in Nucleosome Remodeling and Histone Eviction in a Cytochrome c-Dependent Manner. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001413 SMASH-BIO | force_spectroscopy | study_record | in vitro Assignment of structural transitions during mechanical unwrapping of nucleosomes and their disassembly products · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001450 SMASH-BIO | force_spectroscopy | study_record | in vitro Columnar structure of human telomeric chromatin. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-001469 SMASH-BIO | force_spectroscopy | study_record | in vitro Dependence of Nucleosome Mechanical Stability on DNA Mismatches · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001545 SMASH-BIO | force_spectroscopy | study_record | in vitro Histone chaperones exhibit conserved functionality in nucleosome remodeling · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001549 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Human FACT subunits coordinate to catalyze both disassembly and reassembly of nucleosomes. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication, unfolding_protein | unmapped |
| EV-SMASH-SMFS-001658 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 PICH acts as a force-dependent nucleosome remodeler. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-001692 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7 Reconstituted TAD-size chromatin fibers feature heterogeneous nucleosome clusters. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-001731 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Single-stranded nucleic acid binding and coacervation by linker histone H1. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-001758 SMASH-BIO | force_spectroscopy | study_record | in vitro The columnar structure of human telomeric chromatin suggests mechanisms for telomere maintenance · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-001796 SMASH-BIO | force_spectroscopy | study_record | in vitro A Horizontal Magnetic Tweezers for Studying Single DNA Molecules and DNA-Binding Proteins. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-001855 SMASH-BIO | force_spectroscopy | study_record | in vitro Condensin compacts DNA in 15 nm steps and requires FACT for extrusion on chromatin · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-001888 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Direct visualization of the effect of DNA structure and ionic conditions on HU-DNA interactions. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-001920 SMASH-BIO | force_spectroscopy | study_record | in vitro Extended and dynamic linker histone-DNA Interactions control chromatosome compaction. · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-002002 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7 Mechanical and structural properties of archaeal hypernucleosomes. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-002037 SMASH-BIO | force_spectroscopy | study_record | in vitro Nano-Surveillance: Tracking Individual Molecules in a Sea of Chromatin. · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-002107 SMASH-BIO | force_spectroscopy | study_record | in vitro Recognition of the inherently unstable H2A nucleosome by Swc2 is a major determinant for unidirectional H2A.Z exchange. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-002279 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Constructing arrays of nucleosome positioning sequences using Gibson Assembly for single-molecule studies. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-002341 SMASH-BIO | force_spectroscopy | study_record | in vitro Extended and dynamic linker histone-DNA interactions control chromatosome compaction · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-002377 SMASH-BIO | force_spectroscopy | study_record | in vitro Histone H2A Ubiquitination Reinforces Mechanical Stability and Asymmetry at the Single-Nucleosome Level. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-002535 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7 Single-molecule and in silico dissection of the interaction between Polycomb repressive complex 2 and chromatin. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-002573 SMASH-BIO | force_spectroscopy | study_record | in vitro The condensation of HP1-α/Swi6 imparts nuclear stiffness · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-002672 SMASH-BIO | force_spectroscopy | study_record | in vitro DNA Sequence Is a Major Determinant of Tetrasome Dynamics. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-002675 SMASH-BIO | force_spectroscopy | study_record | in vitro DNA sequence is a major determinant of tetrasome dynamics · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-002759-r0 SMASH-BIO | force_spectroscopy | rupture_force: 12 pN | in vitro Interactions between PHD3-Bromo of MLL1 and H3K4me3 Revealed by Single-Molecule Magnetic Tweezers in a Parallel DNA Circuit. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-002838 SMASH-BIO | force_spectroscopy | study_record | in vitro PRC2 bridges non-adjacent nucleosomes to establish heterochromatin · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-002917 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone. · Core histones; hydrodynamic stretching; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-002936 SMASH-BIO | force_spectroscopy | study_record | in vitro The base pair-scale diffusion of nucleosomes modulates binding of transcription factors. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-003038 SMASH-BIO | force_spectroscopy | study_record | in vitro Compaction of Single-Molecule Megabase-Long Chromatin under the Influence of Macromolecular Crowding. · Core histones; hydrodynamic stretching; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003082 SMASH-BIO | force_spectroscopy | study_record | in vitro Dynamics of Chromatin Fibers: Comparison of Monte Carlo Simulations with Force Spectroscopy. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, receptor_ligand_adhesion, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-003187 SMASH-BIO | force_spectroscopy | study_record | in vitro Modification of the histone tetramer at the H3-H3 interface impacts tetrasome conformations and dynamics. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-003428 SMASH-BIO | force_spectroscopy | study_record | in vitro Biophysical characterization of the association of histones with single-stranded DNA. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-003624 SMASH-BIO | force_spectroscopy | study_record | in vitro Nucleosome mobility and the regulation of gene expression: Insights from single-molecule studies. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-003655 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7 Probing the mechanical stability of bridged DNA-H-NS protein complexes by single-molecule AFM pulling. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003717 SMASH-BIO | force_spectroscopy | study_record | in vitro Single-molecule force spectroscopy on histone H4 tail-cross-linked chromatin reveals fiber folding. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003766 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.6 The supercoiling state of DNA determines the handedness of both H3 and CENP-A nucleosomes. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-003833 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.6 CENP-A and H3 Nucleosomes Display a Similar Stability to Force-Mediated Disassembly. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-003897 SMASH-BIO | force_spectroscopy | study_record | in vitro FACT Remodels the Tetranucleosomal Unit of Chromatin Fibers for Gene Transcription. · Core histones; afm smfs; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, translation_transcription_replication, unfolding_protein | unmapped |
| EV-SMASH-SMFS-004043 SMASH-BIO | force_spectroscopy | study_record | in vitro Simple horizontal magnetic tweezers for micromanipulation of single DNA molecules and DNA-protein complexes. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-004094 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 TrmBL2 from Pyrococcus furiosus Interacts Both with Double-Stranded and Single-Stranded DNA. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, unfolding_nucleic_acid, unfolding_protein | unmapped |
| EV-SMASH-SMFS-004159 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.6 Comparing the Assembly and Handedness Dynamics of (H3.3-H4)2 Tetrasomes to Canonical Tetrasomes. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-004161 SMASH-BIO | force_spectroscopy | study_record | in vitro Condensation transition and forced unravelling of DNA-histone H1 toroids: a multi-state free energy landscape. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-004253 SMASH-BIO | force_spectroscopy | study_record | in vitro Interactions of Histone Acetyltransferase p300 with the Nuclear Proteins Histone and HMGB1, As Revealed by Single Molecule Atomic Force Spectroscopy. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, receptor_ligand_adhesion, rheology_cell, translation_transcription_replication, unfolding_protein | unmapped |
| EV-SMASH-SMFS-004313-r0 SMASH-BIO | force_spectroscopy | folding_free_energy: 2.3 kBT | in vitro Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-004487 SMASH-BIO | force_spectroscopy | study_record | in vitro Characterization of nucleosome unwrapping within chromatin fibers using magnetic tweezers. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-004507 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 DNA bridging and looping by HMO1 provides a mechanism for stabilizing nucleosome-free chromatin. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-004510 SMASH-BIO | force_spectroscopy | study_record | in vitro DNA supercoiling: a regulatory signal for the λ repressor. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-004592 SMASH-BIO | force_spectroscopy | study_record | in vitro Locus of enterocyte effacement-encoded regulator (Ler) of pathogenic Escherichia coli competes off histone-like nucleoid-structuring protein (H-NS) through noncooperative DNA binding. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell, translation_transcription_replication, unfolding_protein | unmapped |
| EV-SMASH-SMFS-004649 SMASH-BIO | force_spectroscopy | study_record | in vitro Non-destructive handling of individual chromatin fibers isolated from single cells in a microfluidic device utilizing an optically driven microtool. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-004773 SMASH-BIO | force_spectroscopy | study_record | in vitro A model of H-NS mediated compaction of bacterial DNA. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-004864 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.9 Fast, label-free force spectroscopy of histone-DNA interactions in individual nucleosomes using nanopores. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-004889 SMASH-BIO | force_spectroscopy | study_record | in vitro Insights into chromatin fibre structure by in vitro and in silico single-molecule stretching experiments. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-005069 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Torque modulates nucleosome stability and facilitates H2A/H2B dimer loss. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-005166 SMASH-BIO | force_spectroscopy | study_record | in vitro Dynamics of forced nucleosome unraveling and role of nonuniform histone-DNA interactions. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-005209 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.7 Histone H1 compacts DNA under force and during chromatin assembly. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-005225 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.5 Kinetics and thermodynamics of phenotype: unwinding and rewinding the nucleosome. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-005262 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 7.6 NAP1-assisted nucleosome assembly on DNA measured in real time by single-molecule magnetic tweezers. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-005430 SMASH-BIO | force_spectroscopy | study_record | in vitro Assembly of recombinant nucleosomes on nanofabricated DNA curtains for single-molecule imaging. · Core histones; hydrodynamic stretching; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-005507 SMASH-BIO | force_spectroscopy | study_record | in vitro Force spectroscopy of chromatin fibers: extracting energetics and structural information from Monte Carlo simulations. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication, unfolding_protein | unmapped |
| EV-SMASH-SMFS-005524 SMASH-BIO | force_spectroscopy | study_record | in vitro Histone fold modifications control nucleosome unwrapping and disassembly. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-005546 SMASH-BIO | force_spectroscopy | study_record | in vitro Linker histones incorporation maintains chromatin fiber plasticity. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-005668 SMASH-BIO | force_spectroscopy | study_record | in vitro Stretching short sequences of DNA with constant force axial optical tweezers. · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-005675-r0 SMASH-BIO | force_spectroscopy | velocity: 25 bp/s | in vitro The RSC chromatin remodelling ATPase translocates DNA with high force and small step size. · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-005730 SMASH-BIO | force_spectroscopy | study_record | in vitro Biophysical characterization of DNA binding from single molecule force measurements. · Core histones; afm smfs; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-005978 SMASH-BIO | force_spectroscopy | study_record | in vitro 10 years of tension on chromatin: results from single molecule force spectroscopy. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-006002 SMASH-BIO | force_spectroscopy | study_record | in vitro Brownian dynamics simulation of DNA unrolling from the nucleosome. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-006135 SMASH-BIO | force_spectroscopy | study_record | in vitro Nucleosome assembly depends on the torsion in the DNA molecule: a magnetic tweezers study. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-006151 SMASH-BIO | force_spectroscopy | study_record | in vitro Probing structural stability of chromatin assembly sorted from living cells. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion, rheology_cell, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-006159 SMASH-BIO | force_spectroscopy | study_record | in vitro Protein-mediated molecular bridging: a key mechanism in biopolymer organization. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-006173 SMASH-BIO | force_spectroscopy | study_record | in vitro Semiflexible chains in confined spaces. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics | unmapped |
| EV-SMASH-SMFS-006196 SMASH-BIO | force_spectroscopy | study_record | in vitro Single-molecule force spectroscopy reveals a highly compliant helical folding for the 30-nm chromatin fiber. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-006240 SMASH-BIO | force_spectroscopy | study_record | in vitro · pH 8 Transportin mediates nuclear entry of DNA in vertebrate systems. · Core histones; optical tweezers; experiment class: chromatin_mechanics, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-006624 SMASH-BIO | force_spectroscopy | study_record | in vitro Kinetics of TmHU binding to DNA as observed by optical tweezers. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-006639 SMASH-BIO | force_spectroscopy | study_record | in vitro Micromanipulation studies of chromatin fibers in Xenopus egg extracts reveal ATP-dependent chromatin assembly dynamics. · Core histones; magnetic tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-006750 SMASH-BIO | force_spectroscopy | study_record | in vitro Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation. · Core histones; optical tweezers; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-006752 SMASH-BIO | force_spectroscopy | study_record | in vitro Binding of TmHU to single dsDNA as observed by optical tweezers. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-006776 SMASH-BIO | force_spectroscopy | study_record | in vitro Direct measurement of local chromatin fluidity using optical trap modulation force spectroscopy. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, unfolding_protein | unmapped |
| EV-SMASH-SMFS-006792 SMASH-BIO | force_spectroscopy | study_record | in vitro Effect of force on mononucleosomal dynamics. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-006854 SMASH-BIO | force_spectroscopy | study_record | in vitro Modelling the biomechanical properties of DNA using computer simulation. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, force_generation_motor, nucleic_acid_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-006989 SMASH-BIO | force_spectroscopy | study_record | in vitro Forced unraveling of nucleosomes assembled on heterogeneous DNA using core histones, NAP-1, and ACF. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-007423 SMASH-BIO | force_spectroscopy | study_record | in vitro Compaction of single DNA molecules induced by binding of integration host factor (IHF). · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction | unmapped |
| EV-SMASH-SMFS-007460 SMASH-BIO | force_spectroscopy | study_record | in vitro Unfolding individual nucleosomes by stretching single chromatin fibers with optical tweezers. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, receptor_ligand_adhesion, translation_transcription_replication | unmapped |
| EV-SMASH-SMFS-007508-r0 SMASH-BIO | force_spectroscopy | persistence_length: 30 nm | in vitro Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure. · Core histones; optical tweezers; experiment class: chromatin_mechanics, nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-007511 SMASH-BIO | force_spectroscopy | study_record | in vitro Reversible and irreversible unfolding of mitotic newt chromosomes by applied force. · Core histones; force spectroscopy unspecified; experiment class: chromatin_mechanics, receptor_ligand_adhesion, unfolding_protein | unmapped |
Conflicts
No conflicts found among comparable evidence.
706 evidence items could not be compared: they lack a comparable observable type, a value, or an uncertainty. Absence of a conflict here is not agreement.