Peptidyl-prolyl cis-trans isomerase A

UniProt P62937 · gene PPIA · Homo sapiens · 165 residues

215evidence items
204mapped to a state
2states
7techniques
4sources
0conflicts

Coverage grid

Mapped evidence per state and technique. Shaded rows rest on a single technique. Badge = best data level in the cell: raw (traces, images, FIDs: can be re-analysed), proc (maps, curves, tables, trajectories) or rep (values in the paper only).

StateBasisxraycryoemmicroednmr_structurenmr_shiftsaf_predictionmdTotal
major (ground) state
CypA-major
observedproc 190proc 8·proc 6···204
minor (excited) state
CypA-minor
inferred·······0

Unmapped evidence: 11 of 215 items. Mappings come from curator assignments and curated rules; see About for how rules work.

Sources

SourceEvidenceMapped
AlphaFold DB10
BMRB80
MDDB10
RCSB PDB205204

Curated rules applied

Structure

Choose a state. Each model is badged observed or inferred; assumptions are one click away.

States and transitions

major (ground) stateobservedminor (excited) stateinferred
StateBasisParentDescription
major (ground) state
CypA-major
observed—Ground-state fold; the room-temperature structure 3K0N also models alternative side-chain conformers.
minor (excited) state
CypA-minor
inferred—Low-population state exchanging with the ground state on the catalytic timescale, seen by NMR relaxation dispersion.
Assumptions (2)
  • Population and structure are inferred from relaxation dispersion fits and alternative conformers, not resolved directly.
  • Assumes two-state exchange; no model is exported.

No transitions recorded in this version (no rate or free-energy evidence has been curated yet).

Evidence

One row per deposit or experiment. Filter by technique, environment or text. Unmapped evidence is listed too.

EvidenceTechniqueObservableConditionsMapped to state
EV-PDB-1AK4-1
RCSB PDB
xrayresolution: 2.36 Åin vitro · -173.15 °C · pH 7
HUMAN CYCLOPHILIN A BOUND TO THE AMINO-TERMINAL DOMAIN OF HIV-1 CAPSID · CYCLOPHILIN A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1AWQ-1
RCSB PDB
xrayresolution: 1.58 Åin vitro · -173.15 °C · pH 8.4
CYPA COMPLEXED WITH HAGPIA (PSEUDO-SYMMETRIC MONOMER) · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1AWR-1
RCSB PDB
xrayresolution: 1.58 Åin vitro · -173.15 °C · pH 8.4
CYPA COMPLEXED WITH HAGPIA · CYCLOPHILIN A (chains A,B,C,D,E,F)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1AWS-1
RCSB PDB
xrayresolution: 2.55 Åin vitro · -173.15 °C · pH 8.4
SECYPA COMPLEXED WITH HAGPIA (PSEUDO-SYMMETRIC MONOMER) · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1AWT-1
RCSB PDB
xrayresolution: 2.55 Åin vitro · -173.15 °C · pH 8.4
SECYPA COMPLEXED WITH HAGPIA · CYCLOPHILIN A (chains A,B,C,D,E,F)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1AWU-1
RCSB PDB
xrayresolution: 2.34 Åin vitro · -173.15 °C · pH 8.4
CYPA COMPLEXED WITH HVGPIA (PSEUDO-SYMMETRIC MONOMER) · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1AWV-1
RCSB PDB
xrayresolution: 2.34 Åin vitro · -173.15 °C · pH 8.4
CYPA COMPLEXED WITH HVGPIA · CYCLOPHILIN A (chains A,B,C,D,E,F)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1BCK-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · 19.85 °C · pH 8
HUMAN CYCLOPHILIN A COMPLEXED WITH 2-THR CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWA-1
RCSB PDB
xrayresolution: 2.1 Åin vitro
X-RAY STRUCTURE OF A MONOMERIC CYCLOPHILIN A-CYCLOSPORIN A CRYSTAL COMPLEX AT 2.1 ANGSTROMS RESOLUTION · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWB-1
RCSB PDB
xrayresolution: 2.2 Åin vitro
THE X-RAY STRUCTURE OF (MEBM2T)1-CYCLOSPORIN COMPLEXED WITH CYCLOPHILIN A PROVIDES AN EXPLANATION FOR ITS ANOMALOUSLY HIGH IMMUNOSUPPRESSIVE ACTIVITY · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWC-1
RCSB PDB
xrayresolution: 1.86 Åin vitro
IMPROVED BINDING AFFINITY FOR CYCLOPHILIN A BY A CYCLOSPORIN DERIVATIVE SINGLY MODIFIED AT ITS EFFECTOR DOMAIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWF-1
RCSB PDB
xrayresolution: 1.86 Åin vitro
HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWH-1
RCSB PDB
xrayresolution: 1.86 Åin vitro · 19.85 °C · pH 8
HUMAN CYCLOPHILIN A COMPLEXED WITH 3-D-SER CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWJ-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · 19.85 °C · pH 8
HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL 3-S-METHYL-SARCOSINE CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWK-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · 19.85 °C · pH 8
HUMAN CYCLOPHILIN A COMPLEXED WITH 1-(6,7-DIHYDRO)MEBMT 2-VAL 3-D-(2-S-METHYL)SARCOSINE CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWL-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · 19.85 °C · pH 8
HUMAN CYCLOPHILIN A COMPLEXED WITH 4 4-HYDROXY-MELEU CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWM-1
RCSB PDB
xrayresolution: 2 Åin vitro · 19.85 °C · pH 8
HUMAN CYCLOPHILIN A COMPLEXED WITH 4 MEILE CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWO-1
RCSB PDB
xrayresolution: 1.86 Åin vitro · 19.85 °C · pH 8.2
HUMAN CYCLOPHILIN A COMPLEXED WITH THR2, LEU5, D-HIV8, LEU10 CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1FGL-1
RCSB PDB
xrayresolution: 1.8 Åin vitro
Cyclophilin A complexed with a fragment of HIV-1 GAG protein · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1M63-3
RCSB PDB
xrayresolution: 2.8 Åin vitro · -173.15 °C · pH 6.5 · ligands CA, FE, ZN
Crystal structure of calcineurin-cyclophilin-cyclosporin shows common but distinct recognition of immunophilin-drug complexes · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains C,G)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1M9C-1
RCSB PDB
xrayresolution: 2 Åin vitro · -173.15 °C · pH 8
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type Complex. · Cyclophilin A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1M9D-1
RCSB PDB
xrayresolution: 1.9 Åin vitro · -173.15 °C · pH 8.5
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) O-type chimera Complex. · Cyclophilin A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1M9E-1
RCSB PDB
xrayresolution: 1.72 Åin vitro · -173.15 °C · pH 8
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A Complex. · Cyclophilin A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1M9F-1
RCSB PDB
xrayresolution: 1.73 Åin vitro · -173.15 °C · pH 8.5
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,A88M Complex. · Cyclophilin A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1M9X-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 8.5
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,A88M,G89A Complex. · Cyclophilin A (chains A,B,E,F)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1M9Y-1
RCSB PDB
xrayresolution: 1.9 Åin vitro · -173.15 °C · pH 8.5
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,G89A Complex. · Cyclophilin A (chains A,B,E,F)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1MF8-3
RCSB PDB
xrayresolution: 3.1 Åin vitro · -173.15 °C · pH 4.6 · ligands CA, PO4
Crystal Structure of human calcineurin complexed with cyclosporin A and human cyclophilin · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains C)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1MIK-1
RCSB PDB
xrayresolution: 1.76 Åin vitro
THE ROLE OF WATER MOLECULES IN THE STRUCTURE-BASED DESIGN OF (5-HYDROXYNORVALINE)-2-CYCLOSPORIN: SYNTHESIS, BIOLOGICAL ACTIVITY, AND CRYSTALLOGRAPHIC ANALYSIS WITH CYCLOPHILIN A · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1OCA-1
RCSB PDB
nmr_structurestructurein vitro · 25.85 °C · pH 6.5
HUMAN CYCLOPHILIN A, UNLIGATED, NMR, 20 STRUCTURES · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1RMH-1
RCSB PDB
xrayresolution: 2.4 Åin vitro
RECOMBINANT CYCLOPHILIN A FROM HUMAN T CELL · CYCLOPHILIN A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1VBT-1
RCSB PDB
xrayresolution: 2.3 Åin vitro · -99.15 °C · pH 8.2
Structure of cyclophilin complexed with sulfur-substituted tetrapeptide AAPF · CYCLOPHILIN A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1W8L-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · -173.15 °C · pH 8 · ligands 1P3
Enzymatic and structural characterization of non peptide ligand cyclophilin complexes · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1W8M-1
RCSB PDB
xrayresolution: 1.65 Åin vitro · -173.15 °C · pH 8 · ligands E1P
Enzymatic and Structural Characterisation of Non Peptide Ligand Cyclophilin Complexes · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1W8V-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 8
Enzymatic and structural characterization of non peptide ligand cyclophilin complexes · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1ZKF-1
RCSB PDB
xrayresolution: 2.55 Åin vitro · 24.85 °C · pH 8.2
Cyrstal Structure of Human Cyclophilin-A in Complex with suc-AGPF-pNA · Peptidyl-prolyl cis-trans isomerase A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2ALF-1
RCSB PDB
xrayresolution: 1.9 Åin vitro · -173.15 °C · pH 8.5 · ligands MG
crystal structure of human CypA mutant K131A · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2CPL-1
RCSB PDB
xrayresolution: 1.63 Åin vitro
SIMILARITIES AND DIFFERENCES BETWEEN HUMAN CYCLOPHILIN A AND OTHER BETA-BARREL STRUCTURES. STRUCTURAL REFINEMENT AT 1.63 ANGSTROMS RESOLUTION · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2MS4-1
RCSB PDB
nmr_structurestructurein vitro · 31.85 °C · pH 6.8
Cyclophilin a complexed with a fragment of crk-ii · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2MZU-1
RCSB PDB
nmr_structurestructurein vitro · 25.85 °C · pH 6.5
Extending the eNOE data set of large proteins by evaluation of NOEs with unresolved diagonals · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2N0T-1
RCSB PDB
nmr_structurestructurein vitro · -247.15 °C · pH 6.5
Structural ensemble of the enzyme cyclophilin reveals an orchestrated mode of action at atomic resolution · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2RMA-1
RCSB PDB
xrayresolution: 2.1 Åin vitro
Crystal structures of cyclophilin A complexed with cyclosporin A and N-methyl-4-[(E)-2-butenyl]-4,4-dimethylthreonine cyclosporin A · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (chains A,C,E,G,I,K,M,O,Q,S)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2RMB-1
RCSB PDB
xrayresolution: 2.1 Åin vitro
Crystal structures of cyclophilin A complexed with cyclosporin A and N-methyl-4-[(E)-2-butenyl]-4,4-dimethylthreonine cyclosporin A · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (chains A,C,E,G,I,K,M,O,Q,S)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2X25-1
RCSB PDB
xrayresolution: 1.2 Åin vitro · 13.85 °C
Free acetyl-CypA orthorhombic form · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2X2A-1
RCSB PDB
xrayresolution: 1.4 Åin vitro · 13.85 °C · ligands GOL, SO4
Free acetyl-CypA trigonal form · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2X2C-2
RCSB PDB
xrayresolution: 2.41 Åin vitro · 13.85 °C
acetyl-CypA:cyclosporine complex · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains K,M,O,Q,S)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2CYH-1
RCSB PDB
xrayresolution: 1.64 Åin vitro · ligands ALA, PRO
CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE ALA-PRO · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1YND-1
RCSB PDB
xrayresolution: 1.6 Åin vitro · 19.85 °C · pH 6.5 · ligands SFA
Structure of human cyclophilin A in complex with the novel immunosuppressant sanglifehrin A at 1.6A resolution · Peptidyl-prolyl cis-trans isomerase A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1VBS-1
RCSB PDB
xrayresolution: 2 Åin vitro · -99.15 °C · pH 8.2
STRUCTURE OF CYCLOPHILIN COMPLEXED WITH (D)ALA CONTAINING TETRAPEPTIDE · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1NMK-1
RCSB PDB
xrayresolution: 2.1 Åin vitro · 19.85 °C · pH 7 · ligands SFM
The Sanglifehrin-Cyclophilin Interaction: Degradation Work, Synthetic Macrocyclic Analogues, X-ray Crystal Structure and Binding Data · Peptidyl-prolyl cis-trans isomerase A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-1CWI-1
RCSB PDB
xrayresolution: 1.9 Åin vitro · 19.85 °C · pH 8
HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL 3-(N-METHYL)-D-ALANINE CYCLOSPORIN · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2X2D-1
RCSB PDB
xrayresolution: 1.95 Åin vitro · -173.15 °C
acetyl-CypA:HIV-1 N-term capsid domain complex · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains B,C)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-2XGY-2
RCSB PDB
xrayresolution: 1.8 Åin vitro · -173.15 °C · pH 7.5 · ligands GOL
Complex of Rabbit Endogenous Lentivirus (RELIK)Capsid with Cyclophilin A · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-36OI-2
RCSB PDB
xrayresolution: 1.47 Åin vitro · -173.15 °C · ligands A1AOL, GNP, MG
Tri-complex of Compound 1, KRAS G13C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-36OJ-2
RCSB PDB
xrayresolution: 1.74 Åin vitro · -173.15 °C · ligands A1DKX, CL, GNP, MG, PEG
Tri-complex of Compound 2, KRAS G13C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-36OK-2
RCSB PDB
xrayresolution: 1.21 Åin vitro · -173.15 °C · ligands A1DKY, CL, GNP, MG, PEG
Tri-complex of RMC-8839, KRAS G13C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3CYH-1
RCSB PDB
xrayresolution: 1.9 Åin vitro · ligands PRO, SER
CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE SER-PRO · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3CYS-1
RCSB PDB
nmr_structurestructurein vitro
DETERMINATION OF THE NMR SOLUTION STRUCTURE OF THE CYCLOPHILIN A-CYCLOSPORIN A COMPLEX · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3K0M-1
RCSB PDB
xrayresolution: 1.25 Åin vitro · -173.15 °C · pH 7.5
Cryogenic structure of CypA · Cyclophilin A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3K0N-1
RCSB PDB
xrayresolution: 1.391 Åin vitro · 14.85 °C · pH 7.5
Room temperature structure of CypA · Cyclophilin A (chains A)
major (ground) state · curator:draft (unreviewed) · high
Room-temperature structure of CypA.
EV-PDB-3K0O-1
RCSB PDB
xrayresolution: 1.55 Åin vitro · 14.85 °C · pH 7
Room temperature structure of CypA mutant Ser99Thr · Cyclophilin A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3K0P-1
RCSB PDB
xrayresolution: 1.649 Åin vitro · -173.15 °C · pH 7
Cryogenic structure of CypA mutant Ser99Thr · Cyclophilin A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3K0Q-1
RCSB PDB
xrayresolution: 2.317 Åin vitro · -173.15 °C · pH 7.5
Cryogenic structure of CypA mutant Ser99Thr (2) · Cyclophilin A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3K0R-1
RCSB PDB
xrayresolution: 2.424 Åin vitro · -173.15 °C · pH 7
Cryogenic structure of CypA mutant Arg55Lys · Cyclophilin A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3ODI-1
RCSB PDB
xrayresolution: 2.2 Åin vitro · -173.15 °C · pH 6.5
Crystal structure of cyclophilin A in complex with Voclosporin E-ISA247 · Cyclophilin A (chains A,C,E,G,I,K,M,O,Q,S)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3ODL-1
RCSB PDB
xrayresolution: 2.31 Åin vitro · -173.15 °C · pH 6.5
Crystal structure of cyclophilin A in complex with Voclosporin Z-ISA247 · Cyclophilin A (chains A,C,E,G,I,K,M,O,Q,S)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-3RDD-1
RCSB PDB
xrayresolution: 2.14 Åin vitro · -173.15 °C · pH 7.5 · ligands EA4
Human Cyclophilin A Complexed with an Inhibitor · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4CYH-1
RCSB PDB
xrayresolution: 2.1 Åin vitro · ligands HIS, PRO
CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE HIS-PRO · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4IPZ-1
RCSB PDB
xrayresolution: 1.67 Åin vitro · -173.15 °C · pH 6 · ligands CL
SmBz bound to Cyclophilin A · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4N1N-1
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · pH 8 · ligands UNU
Structure of Cyclophilin A in complex with Benzamide. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4N1O-1
RCSB PDB
xrayresolution: 1.75 Åin vitro · -173.15 °C · pH 8 · ligands LSA
Structure of Cyclophilin A in complex with Saccharin. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4N1Q-1
RCSB PDB
xrayresolution: 1.65 Åin vitro · -173.15 °C · pH 8 · ligands WM2
Structure of Cyclophilin A in complex with cyclohexanecarboxamide. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4N1S-1
RCSB PDB
xrayresolution: 1.47 Åin vitro · -173.15 °C · pH 8 · ligands WM4
Structure of Cyclophilin A in complex with benzohydrazide. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUG-1
RCSB PDB
xrayresolution: 1.48 Åin vitro · -173.15 °C
Multiconformer synchrotron model of CypA at 100 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUH-1
RCSB PDB
xrayresolution: 1.34 Åin vitro · -123.15 °C
Multiconformer synchrotron model of CypA at 150 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUJ-1
RCSB PDB
xrayresolution: 1.42 Åin vitro · -33.15 °C
Multiconformer synchrotron model of CypA at 240 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUK-1
RCSB PDB
xrayresolution: 1.48 Åin vitro · -13.15 °C
Multiconformer synchrotron model of CypA at 260 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUL-1
RCSB PDB
xrayresolution: 1.42 Åin vitro · 6.85 °C
Multiconformer synchrotron model of CypA at 280 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUO-1
RCSB PDB
xrayresolution: 1.2 Åin vitro · -0.15 °C
High-resolution multiconformer synchrotron model of CypA at 273 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUP-1
RCSB PDB
xrayresolution: 1.75 Åin vitro · -0.15 °C
Multiconformer fixed-target X-ray free electron (XFEL) model of CypA at 273 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5CYH-1
RCSB PDB
xrayresolution: 2.1 Åin vitro · ligands GLY, PRO
CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE GLY-PRO · CYCLOPHILIN A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5F66-1
RCSB PDB
xrayresolution: 1.15 Åin vitro · -0.15 °C · pH 7.5
High-resolution isotropic multiconformer synchrotron model of CypA at 273 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUL-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 1 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUN-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 2 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUO-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 3 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUQ-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 4 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUS-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 6 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUU-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 7 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUV-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 8 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUW-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 9 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUZ-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 1 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV0-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 2 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV1-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 3 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KUR-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · pH 7.5
Human cyclophilin A at 100K, Data set 5 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5FJB-2
RCSB PDB
cryoemresolution: 9 Åin vitro
Cyclophilin A Stabilize HIV-1 Capsid through a Novel Non- canonical Binding Site · PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (chains C)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUN-1
RCSB PDB
xrayresolution: 1.58 Åin vitro · 36.85 °C
Multiconformer synchrotron model of CypA at 310 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUM-1
RCSB PDB
xrayresolution: 1.5 Åin vitro · 26.85 °C
Multiconformer synchrotron model of CypA at 300 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4YUI-1
RCSB PDB
xrayresolution: 1.38 Åin vitro · -93.15 °C
Multiconformer synchrotron model of CypA at 180 K · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4N1R-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · -173.15 °C · pH 8 · ligands WM3
Structure of Cyclophilin A in complex with benzenesulfonohydrazide. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4N1P-1
RCSB PDB
xrayresolution: 1.9 Åin vitro · -173.15 °C · pH 8 · ligands WM1
Structure of Cyclophilin A in complex with Picolinamide. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-4N1M-1
RCSB PDB
xrayresolution: 1.15 Åin vitro · -173.15 °C · pH 8 · ligands GLY, PRO
Structure of Cyclophilin A in complex with GlyPro. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV5-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 7 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5LUD-1
RCSB PDB
xrayresolution: 1.25 Åin vitro · -173.15 °C · pH 8 · ligands 76X
Structure of Cyclophilin A in complex with 2,3-Diaminopyridine · Peptidyl-prolyl cis-trans isomerase (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5TA4-1
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · pH 8.5 · ligands 838, SO4
Discovery of a Potent Cyclophilin Inhibitor (Compound 8) based on Structural Simplification of Sanglifehrin A · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJM-1
RCSB PDB
xrayresolution: 1.354 Åin vitro · -173.15 °C · pH 8 · ligands L36
Cyclophilin A complexed with tri-vector ligand 4. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6U5D-1
RCSB PDB
xrayresolution: 1.65 Åin vitro · 17.85 °C · pH 7.5
RT XFEL structure of CypA solved using LCP injection system · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6X4N-1
RCSB PDB
xrayresolution: 1.51 Åin vitro · -173.15 °C · pH 8.5 · ligands UOD
Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors: (2R,5S,11S,14S,18E)-2,11,17,17-tetramethyl-14-(propan-2-yl)-3-oxa-9,12,15,26,29-pentaazatetracyclo[18.5.3.1~5,9~.0~23,27~]nonacosa-1(25),18,20(28),21,23,26-hexaene-4,10,13,16-tetrone (compound 24) · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6Y9Z-2
RCSB PDB
cryoemresolution: 4.8 Åin vitro
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,9) · Peptidyl-prolyl cis-trans isomerase A (chains J)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6Y9Y-2
RCSB PDB
cryoemresolution: 6.1 Åin vitro
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-7,13) · Peptidyl-prolyl cis-trans isomerase A (chains J)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6Y9X-2
RCSB PDB
cryoemresolution: 4.4 Åin vitro
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,7) · Peptidyl-prolyl cis-trans isomerase A (chains J)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6Y9W-2
RCSB PDB
cryoemresolution: 4.1 Åin vitro
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,8) · Peptidyl-prolyl cis-trans isomerase A (chains J)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6Y9V-2
RCSB PDB
cryoemresolution: 6.9 Åin vitro
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-8,13) · Peptidyl-prolyl cis-trans isomerase A (chains J)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6X4Q-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · -173.15 °C · pH 8.5 · ligands UOJ
Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors: (2R,5S,11S,14S,18E)-14-cyclobutyl-2,11,17,17-tetramethyl-15-oxa-3,9,12,26,29-pentaazatetracyclo[18.5.3.1~5,9~.0~23,27~]nonacosa-1(25),18,20(28),21,23,26-hexaene-4,10,13,16-tetrone (compound 33) · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6X4P-1
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · ligands UOG
Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors: (2R,5S,11S,14S,18E)-2,11,17,17-tetramethyl-14-(propan-2-yl)-15-oxa-3,9,12,26,29-pentaazatetracyclo[18.5.3.1~5,9~.0~23,27~]nonacosa-1(25),18,20(28),21,23,26-hexaene-4,10,13,16-tetrone (compound 28) · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6X4O-1
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · pH 8.5 · ligands UO7
Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors: (2R,5S,11S,14S,18E)-2,11-dimethyl-14-(propan-2-yl)-3-oxa-9,12,15,21,29-pentaazatetracyclo[18.5.3.1~5,9~.0~23,27~]nonacosa-1(26),18,20,22,24,27-hexaene-4,10,13,16-tetrone (compound 21) · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6X4M-1
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · pH 8.5 · ligands UMM
Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors: tert-butyl [(2S)-1-{[(3S,17S)-2,16-dioxo-10,15-dioxa-1,21-diazatricyclo[15.3.1.1~5,9~]docosa-5(22),6,8-trien-3-yl]amino}-3-methyl-1-oxobutan-2-yl]carbamate (compound 3) · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6X3Y-1
RCSB PDB
xrayresolution: 1.4 Åin vitro · -173.15 °C · pH 8.5 · ligands UMM
Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6X3R-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · -173.15 °C · pH 8.5 · ligands ZXX
Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6U5G-1
RCSB PDB
microedresolution: 2.5 Åin vitro
MicroED structure of a FIB-milled CypA Crystal · Peptidyl-prolyl cis-trans isomerase A (chains A)
unmapped
EV-PDB-6U5E-1
RCSB PDB
xrayresolution: 1.56 Åin vitro · 17.85 °C · pH 7.5
RT XFEL structure of CypA solved using celloluse carrier media · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6U5C-1
RCSB PDB
xrayresolution: 1.62 Åin vitro · 17.85 °C · pH 7.5
RT XFEL structure of CypA solved using MESH injection system · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6I42-1
RCSB PDB
xrayresolution: 1.38 Åin vitro · -173.15 °C · pH 7
Structure of the alpha-Synuclein PreNAC/Cyclophilin A-complex · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GS6-1
RCSB PDB
xrayresolution: 1.16 Åin vitro · -173.15 °C · ligands DMS, EA4
Cyclophilin A single mutant D66A in complex with an inhibitor. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJY-1
RCSB PDB
xrayresolution: 1.29 Åin vitro · -173.15 °C · ligands F1Z
Cyclophilin A complexed with tri-vector ligand 5. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJR-1
RCSB PDB
xrayresolution: 1.69 Åin vitro · -173.15 °C · pH 8 · ligands F0W
Cyclophilin A complexed with tri-vector ligand 9. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJP-1
RCSB PDB
xrayresolution: 1.94 Åin vitro · -173.15 °C · pH 8 · ligands F0T
Cyclophilin A complexed with tri-vector ligand 7. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJN-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · -173.15 °C · ligands F0Q, FMT, GOL
Cyclophilin A complexed with tri-vector ligand 15. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJL-1
RCSB PDB
xrayresolution: 1.16 Åin vitro · -173.15 °C · ligands F1Q
Cyclophilin A complexed with tri-vector ligand 10. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJJ-1
RCSB PDB
xrayresolution: 1.38 Åin vitro · -173.15 °C · pH 8 · ligands L36
Cyclophilin A complexed with tri-vector ligand 2. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6GJI-1
RCSB PDB
xrayresolution: 1.6 Åin vitro · -173.15 °C · pH 8 · ligands F1E, GOL
Cyclophilin A complexed with the tri-vector ligand 8. · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6BTA-1
RCSB PDB
xrayresolution: 1.5 Åin vitro · -0.15 °C · pH 7.5
CypA Mutant - S99T C115S · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5WC7-1
RCSB PDB
xrayresolution: 1.43 Åin vitro · -0.15 °C · pH 7.5
CypA Mutant - I97V S99T C115S · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5TA2-1
RCSB PDB
xrayresolution: 1.48 Åin vitro · -173.15 °C · ligands 78X
Discovery of a Potent Cyclophilin Inhibitor (Compound 7) based on Structural Simplification of Sanglifehrin A · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5T9Z-1
RCSB PDB
xrayresolution: 1.4 Åin vitro · -173.15 °C · pH 4.2 · ligands 78R
Discovery of a Potent Cyclophilin Inhibitor (Compound 6) based on Structural Simplification of Sanglifehrin A · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5T9W-1
RCSB PDB
xrayresolution: 2 Åin vitro · -173.15 °C · ligands 78E
Discovery of a Potent Cyclophilin Inhibitor (Compound 5) based on Structural Simplification of Sanglifehrin A · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5T9U-1
RCSB PDB
xrayresolution: 2.301 Åin vitro · -173.15 °C · pH 8.5 · ligands 7HG
Discovery of a Potent Cyclophilin Inhibitor (Compound 3) based on Structural Simplification of Sanglifehrin A · Peptidyl-prolyl cis-trans isomerase A (chains A,B,C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOZ-1
RCSB PDB
xrayresolution: 1.61 Åin vitro · -173.15 °C · pH 8 · ligands L99
Structure of cyclophilin A in complex with 3,4-diaminobenzohydrazide · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOY-1
RCSB PDB
xrayresolution: 1.43 Åin vitro · -173.15 °C · pH 8 · ligands 93K
Structure of cyclophilin A in complex with 3,4-diaminobenzamide · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOX-1
RCSB PDB
xrayresolution: 1.49 Åin vitro · -173.15 °C · pH 8 · ligands L97
Structure of cyclophilin A in complex with 2-chloropyridin-3-amine · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOW-1
RCSB PDB
xrayresolution: 1.48 Åin vitro · -173.15 °C · pH 8 · ligands L89
Structure of cyclophilin A in complex with pyridine-3,4-diamine · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOV-1
RCSB PDB
xrayresolution: 2 Åin vitro · -173.15 °C · pH 8 · ligands 93B
Structure of cyclophilin A in complex with hexahydropyrimidine-2-thione · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOU-1
RCSB PDB
xrayresolution: 1.3 Åin vitro · -173.15 °C · pH 8 · ligands L60, TRS
Structure of cyclophilin A in complex with hexahydropyrimidin-2-one · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOT-1
RCSB PDB
xrayresolution: 1.45 Åin vitro · -173.15 °C · pH 8 · ligands 938
Structure of cyclophilin A in complex with 4-chloropyrimidin-5-amine · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOS-1
RCSB PDB
xrayresolution: 1.35 Åin vitro · -173.15 °C · pH 8 · ligands 92Z
Structure of cyclophilin A in complex with 3-amino-1H-pyridin-2-one · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOR-1
RCSB PDB
xrayresolution: 1.8 Åin vitro · -173.15 °C · pH 8 · ligands 93Q
Structure of cyclophilin A in complex with 3-methylpyridin-2-amine · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5NOQ-1
RCSB PDB
xrayresolution: 1.6 Åin vitro · -173.15 °C · pH 8 · ligands 93E
Structure of cyclophilin A in complex with 3-chloropyridin-2-amine · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV7-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 9 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV6-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 8 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV4-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 6 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV3-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 5 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-5KV2-1
RCSB PDB
xrayresolution: 1.7 Åin vitro · 4.85 °C · pH 7.5
Human cyclophilin A at 278K, Data set 4 · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-6ZDJ-2
RCSB PDB
cryoemresolution: 5.8 Åin vitro
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,10) · Peptidyl-prolyl cis-trans isomerase A (chains J)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7ABT-1
RCSB PDB
xrayresolution: 1.31 Åin vitro · -173.15 °C · pH 7.5
Structure of PPIA in complex with PR dipeptide repeat · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7PCJ-1
RCSB PDB
xrayresolution: 1.91 Åin vitro · -173.15 °C · pH 8.4
X-ray structure of CypA-C52AK125C/CsA/aromatic foldamer complex · Peptidyl-prolyl cis-trans isomerase A (chains A,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7QBW-1
RCSB PDB
xrayresolution: 1.59 Åin vitro · -173.15 °C · pH 7.5 · ligands GOL
Human Cyclophilin A double mutant C52AK125C · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7TA8-1
RCSB PDB
nmr_structurestructurein vitro · 24.85 °C · pH 6.5
NMR structure of crosslinked cyclophilin A · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7UXM-1
RCSB PDB
xrayresolution: 1.2 Åin vitro · -173.15 °C · ligands EDO, NH2, WHL
Structure of PPIA in complex with FP29092, a Helicon Polypeptide · Peptidyl-prolyl cis-trans isomerase A (chains A,B,C)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7UXN-1
RCSB PDB
xrayresolution: 1.36 Åin vitro · -173.15 °C · ligands WHL
Structure of PPIA in complex with FP29103, a Helicon Polypeptide · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8G9P-2
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · pH 5.5 · ligands CL, GNP, MG, YV2
Tricomplex of RMC-4998, KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8G9Q-2
RCSB PDB
xrayresolution: 1.4 Åin vitro · -173.15 °C · ligands GNP, MG, YV6
Tricomplex of Compound-1, KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8HZ8-1
RCSB PDB
xrayresolution: 1.81 Åin vitro · 19.85 °C
Structure of PPIA in complex with the peptide of NRF2 · Peptidyl-prolyl cis-trans isomerase A, N-terminally processed (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBF-2
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · pH 8 · ligands EDO, GNP, MG, ZNI
Tricomplex of RMC-7977, KRAS WT, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBG-2
RCSB PDB
xrayresolution: 1.2 Åin vitro · -173.15 °C · pH 8 · ligands GNP, GOL, MG, ZNI
Tricomplex of RMC-7977, HRAS WT, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBH-2
RCSB PDB
xrayresolution: 1.5 Åin vitro · -173.15 °C · ligands GNP, MG, ZNI
Tricomplex of RMC-7977, KRAS G12R, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBI-2
RCSB PDB
xrayresolution: 1.59 Åin vitro · -173.15 °C · pH 8 · ligands GNP, MG, ZNI
Tricomplex of RMC-7977, NRAS WT, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBJ-2
RCSB PDB
xrayresolution: 1.45 Åin vitro · -173.15 °C · pH 8 · ligands EDO, GNP, GOL, MG, ZNI
Tricomplex of RMC-7977, KRAS G12A, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBK-2
RCSB PDB
xrayresolution: 1.26 Åin vitro · -173.15 °C · pH 7 · ligands GNP, MG, ZNI
Tricomplex of RMC-7977, KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBL-2
RCSB PDB
xrayresolution: 1.88 Åin vitro · -173.15 °C · pH 8 · ligands GNP, MG, ZNI
Tricomplex of RMC-7977, KRAS G12D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBM-2
RCSB PDB
xrayresolution: 1.57 Åin vitro · -173.15 °C · pH 7 · ligands GNP, GOL, MG, ZNI
Tricomplex of RMC-7977, KRAS G12V, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-8TBN-2
RCSB PDB
xrayresolution: 1.46 Åin vitro · -173.15 °C · pH 7 · ligands GNP, MG, ZNI
Tricomplex of RMC-7977, KRAS G12S, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9AX6-2
RCSB PDB
xrayresolution: 1.65 Åin vitro · -173.15 °C · ligands A1AHB, GNP, MG
Tricomplex of Daraxonrasib (RMC-6236), KRAS G12D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BFV-2
RCSB PDB
xrayresolution: 1.2 Åin vitro · -173.15 °C · ligands A1AOV, GNP, MG
Tri-complex of Compound-23, KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BFW-2
RCSB PDB
xrayresolution: 1.2 Åin vitro · -173.15 °C · ligands A1AOM, BTB, GNP, MG
Tri-complex of Compound-4, KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BFX-2
RCSB PDB
xrayresolution: 1.4 Åin vitro · -173.15 °C · ligands A1AOD, CL, GNP, MG
Tri-complex of Elironrasib (RMC-6291), KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BFY-2
RCSB PDB
xrayresolution: 1.26 Åin vitro · -173.15 °C · ligands A1AOL, CL, GNP, MG
Tri-complex of Compound-14, KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BFZ-2
RCSB PDB
xrayresolution: 1.8 Åin vitro · -173.15 °C · ligands A1AOK, GNP, MG
Tri-complex of Compound-5, KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG0-2
RCSB PDB
xrayresolution: 1.64 Åin vitro · -173.15 °C · pH 8 · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), NRAS WT, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG1-2
RCSB PDB
xrayresolution: 1.51 Åin vitro · -173.15 °C · ligands A1AOH, GNP, MG
Tri-complex of Compound-3, KRAS G12V, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG2-2
RCSB PDB
xrayresolution: 1.64 Åin vitro · -173.15 °C · ligands A1AOJ, GNP, MG
Tri-complex of Compound-10, KRAS G12V, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG3-2
RCSB PDB
xrayresolution: 1.33 Åin vitro · -173.15 °C · pH 8 · ligands A1AHB, CL, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), NRAS Q61K, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG4-2
RCSB PDB
xrayresolution: 1.14 Åin vitro · -173.15 °C · ligands A1AOG, CL, GNP, MG
Tri-complex of Compound-2, KRAS G12V, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG5-2
RCSB PDB
xrayresolution: 1.67 Åin vitro · -173.15 °C · pH 7 · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), KRAS G13D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG6-2
RCSB PDB
xrayresolution: 1.66 Åin vitro · -173.15 °C · pH 7 · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), KRAS G12V, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG7-2
RCSB PDB
xrayresolution: 1.6 Åin vitro · -173.15 °C · ligands A1AOI, GNP, MG
Tri-complex of Compound-6, KRAS G12V, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG8-2
RCSB PDB
xrayresolution: 1.2 Åin vitro · -173.15 °C · pH 5.5 · ligands A1AHB, BTB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), NRAS Q61R, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BG9-2
RCSB PDB
xrayresolution: 1.58 Åin vitro · -173.15 °C · pH 7 · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), KRAS WT, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BGA-2
RCSB PDB
xrayresolution: 1.41 Åin vitro · -173.15 °C · pH 8 · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), KRAS G12C, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BGB-2
RCSB PDB
xrayresolution: 1.68 Åin vitro · -173.15 °C · pH 8 · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), KRAS Q61H, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BGC-2
RCSB PDB
xrayresolution: 1.87 Åin vitro · -173.15 °C · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), KRAS G12R, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BGD-2
RCSB PDB
xrayresolution: 1.76 Åin vitro · -173.15 °C · pH 5.5 · ligands A1AHB, GNP, MG
Tri-complex of Daraxonrasib (RMC-6236), NRAS Q61L, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BHO-1
RCSB PDB
xrayresolution: 1.89 Åin vitro · -173.15 °C · ligands AF3, GDP, MG, ZNI
Crystal structure of KRAS G12S in a transition state mimetic complex with CYPA and RMC-7977 · Peptidyl-prolyl cis-trans isomerase A (chains B,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BHP-1
RCSB PDB
xrayresolution: 2.1 Åin vitro · -173.15 °C · ligands AF3, GDP, MG, ZNI
Crystal structure of KRAS G12C in a transition state mimetic complex with CYPA and RMC-7977 · Peptidyl-prolyl cis-trans isomerase A (chains B,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BHQ-1
RCSB PDB
xrayresolution: 1.9 Åin vitro · -173.15 °C · ligands AF3, GDP, MG, ZNI
Crystal structure of KRAS G12A in a transition state mimetic complex with CYPA and RMC-7977 · Peptidyl-prolyl cis-trans isomerase A (chains B,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BI1-2
RCSB PDB
xrayresolution: 1.65 Åin vitro · -173.15 °C · ligands GNP, MG, ZNI
Crystal structure of GMPPNP bound KRAS G12D in complex with CYPA and RMC-7977 · Peptidyl-prolyl cis-trans isomerase A (chains B,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9BI2-2
RCSB PDB
xrayresolution: 2.15 Åin vitro · -173.15 °C · ligands GNP, MG, ZNI
Crystal structure of GMPPNP bound KRAS G12C in complex with CYPA and RMC-7977 · Peptidyl-prolyl cis-trans isomerase A (chains B,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9CT7-2
RCSB PDB
xrayresolution: 1.42 Åin vitro · -173.15 °C · ligands A1AZV, CL, GNP, MG
Tricomplex of Compound 1, KRAS G12D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9CT8-2
RCSB PDB
xrayresolution: 1.28 Åin vitro · -173.15 °C · ligands A1AZX, CL, GNP, MG
Tricomplex of Compound 2, KRAS G12D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9CT9-2
RCSB PDB
xrayresolution: 1.35 Åin vitro · -173.15 °C · ligands A1AZY, CL, GNP, MG
Tricomplex of Compound 3, KRAS G12D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7UXJ-1
RCSB PDB
xrayresolution: 2.07 Åin vitro · -173.15 °C · ligands NH2, WHL
Structure of PPIA in complex with FP29102, a Helicon Polypeptide · Peptidyl-prolyl cis-trans isomerase A (chains A,B,C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7UPN-1
RCSB PDB
cryoemresolution: 3.5 Åin vitro · ligands ZN
Maedi visna virus Vif in complex with CypA and E3 ubiquitin ligase · Peptidyl-prolyl cis-trans isomerase A (chains A,B)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-7N9X-5
RCSB PDB
xrayresolution: 3.511 Åin vitro · -173.15 °C
CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions · Peptidyl-prolyl cis-trans isomerase A (chains GGG,HHH,III)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9E3S-2
RCSB PDB
xrayresolution: 1.08 Åin vitro · -173.15 °C · ligands A1BEA, CL, GNP, GOL, MG
Tricomplex of RMC-9945, KRAS G12N, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9YOW-2
RCSB PDB
xrayresolution: 1.57 Åin vitro · -173.15 °C · ligands A1CYT, GNP, MG
Crystal structure of GMPPNP bound KRAS G12C in complex with CYPA and RMC-4791 · Peptidyl-prolyl cis-trans isomerase A (chains B,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9GHY-1
RCSB PDB
xrayresolution: 1.15 Åin vitro · -173.15 °C · ligands A1ILH, CL
Cyclophilin A in complex with Sanglifehrin A analogue (2R,3S,7S,10S,E)-10-(3-aminopropyl)-2,7-dimethylspiro[3,8,11-triaza-1(2,7)-quinolina-5(3,1)-pyridazinacyclopentadecaphanene-13,5'-[1,3]dioxan]-14-ene-4,6,9,12-tetraone · Peptidyl-prolyl cis-trans isomerase A (chains A)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9CTB-1
RCSB PDB
xrayresolution: 1.29 Åin vitro · -173.15 °C · ligands A1AZZ, CL, GNP, MG
Tri-complex of zoldonrasib (RMC-9805), KRAS G12D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-PDB-9CTA-2
RCSB PDB
xrayresolution: 1.29 Åin vitro · -173.15 °C · ligands A1AZW, GNP, MG
Tricomplex of RMC-9945, KRAS G12D, and CypA · Peptidyl-prolyl cis-trans isomerase A (chains C,D)
major (ground) state · rule:cypa-structures-major · low
Experimental structure of CypA; the ground state dominates crystal and NMR structures.
EV-BMRB-2208
BMRB
nmr_shiftschemical_shiftin vitro · 19.85 °C · pH 6.5
1H, 13C and 15N backbone assignments of cyclophilin when bound to cyclosporin A (CsA) and preliminary structural characterization of the CsA binding site · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts
unmapped
EV-BMRB-25104
BMRB
nmr_shiftschemical_shiftin vitro · 31.85 °C · pH 6.8
CYCLOPHILIN A COMPLEXED WITH A FRAGMENT OF CRK-II · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts
unmapped
EV-BMRB-25337
BMRB
nmr_shiftschemical_shiftin vitro · 9.85 °C · pH 6.5
Backbone assignments for human Cyclophilin A with saturating concentrations of the model peptide GSFGPDLRAGD · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts
unmapped
EV-BMRB-25502
BMRB
nmr_shiftschemical_shiftin vitro · 25.85 °C · pH 6.5
Extending the eNOE data set of large proteins by evaluation of NOEs with unresolved diagonals · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts
unmapped
EV-BMRB-27620
BMRB
nmr_shiftschemical_shiftin vitro · 19.85 °C · pH 7.5
human CYPA/PPIA · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts
unmapped
EV-BMRB-30977
BMRB
nmr_shiftschemical_shiftin vitro · 24.85 °C · pH 6.5
NMR structure of crosslinked cyclophilin A · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts
unmapped
EV-BMRB-531
BMRB
nmr_shiftschemical_shiftin vitro · 24.85 °C · pH 6.8
1H NMR Studies on Bovine Cyclophilin: Preliminary Structural Characterization of Its Complex with Cyclosporin A · BMRB data: 1H chemical shifts
unmapped
EV-BMRB-532
BMRB
nmr_shiftschemical_shiftin vitro · 24.85 °C · pH 6.8
1H NMR Studies on Bovine Cyclophilin: Preliminary Structural Characterization of Its Complex with Cyclosporin A · BMRB data: 1H chemical shifts
unmapped
EV-AFDB-AF-P62937-F1
AlphaFold DB
af_predictionplddt: 98.06 pLDDTin silico
AlphaFold DB prediction AF-P62937-F1 · AlphaFold Monomer v2.0 pipeline, residues 1-165
unmapped
EV-MDDB-A00A6
MDDB
mdtrajectory: 10 nsin silico · 26.85 °C
MoDEL 2CPL · start 2CPL; Amber Parm99
unmapped

Conflicts

No conflicts found among comparable evidence.

215 evidence items could not be compared: they lack a comparable observable type, a value, or an uncertainty. Absence of a conflict here is not agreement.

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