Bacteriorhodopsin
UniProt P02945 · gene bop · Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) · 262 residues
240evidence items
0mapped to a state
0states
8techniques
5sources
0conflicts
Coverage grid
Mapped evidence per state and technique. Shaded rows rest on a single technique. Badge = best data level in the cell: raw (traces, images, FIDs: can be re-analysed), proc (maps, curves, tables, trajectories) or rep (values in the paper only).
| State | Basis | xray | microed | nmr_structure | nmr_shifts | saxs_sans | force_spectroscopy | integrative | af_prediction | Total |
|---|---|---|---|---|---|---|---|---|---|---|
| No states defined yet. | ||||||||||
Unmapped evidence: 240 of 240 items. Mappings come from curator assignments and curated rules; see About for how rules work.
Sources
| Source | Evidence | Mapped |
|---|---|---|
| AlphaFold DB | 1 | 0 |
| BMRB | 4 | 0 |
| RCSB PDB | 182 | 0 |
| SASBDB | 2 | 0 |
| SMASH-BIO | 51 | 0 |
Structure
No state models are exported for this protein yet. Observed states export the representative PDB entry; inferred states need fitted models, not yet built.
States and transitions
No states defined.
| State | Basis | Parent | Description |
|---|
No transitions recorded in this version (no rate or free-energy evidence has been curated yet).
Evidence
One row per deposit or experiment. Filter by technique, environment or text. Unmapped evidence is listed too.
| Evidence | Technique | Observable | Conditions | Mapped to state |
|---|---|---|---|---|
| EV-PDB-1AP9-1 RCSB PDB | xray | resolution: 2.35 Å | in vitro · -173.15 °C · pH 5.6 · ligands RET X-RAY STRUCTURE OF BACTERIORHODOPSIN FROM MICROCRYSTALS GROWN IN LIPIDIC CUBIC PHASES · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1AT9-1 RCSB PDB | microed | resolution: 2.8 Å | in vitro · ligands RET STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM DETERMINED BY ELECTRON CRYSTALLOGRAPHY · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1BCT-1 RCSB PDB | nmr_structure | structure | in vitro THREE-DIMENSIONAL STRUCTURE OF PROTEOLYTIC FRAGMENT 163-231 OF BACTERIOOPSIN DETERMINED FROM NUCLEAR MAGNETIC RESONANCE DATA IN SOLUTION · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1BHA-1 RCSB PDB | nmr_structure | structure | in vitro THREE-DIMENSIONAL STRUCTURE OF (1-71) BACTERIOOPSIN SOLUBILIZED IN METHANOL-CHLOROFORM AND SDS MICELLES DETERMINED BY 15N-1H HETERONUCLEAR NMR SPECTROSCOPY · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1BHB-1 RCSB PDB | nmr_structure | structure | in vitro Three-dimensional structure of (1-71) bacterioopsin solubilized in methanol-chloroform and SDS micelles determined by 15N-1H heteronuclear NMR spectroscopy · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1BM1-1 RCSB PDB | xray | resolution: 3.5 Å | in vitro · 11.85 °C · pH 5.2 · ligands DPG, RET CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN THE LIGHT-ADAPTED STATE · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1BRD-1 RCSB PDB | microed | resolution: 3.5 Å | in vitro · ligands RET Model for the structure of Bacteriorhodopsin based on high-resolution Electron Cryo-microscopy · BACTERIORHODOPSIN PRECURSOR (chains A) | unmapped |
| EV-PDB-1BRR-1 RCSB PDB | xray | resolution: 2.9 Å | in vitro · -173.15 °C · pH 5.2 · ligands ARC, BGC, GOL, OCT, RET, branched: 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose X-RAY STRUCTURE OF THE BACTERIORHODOPSIN TRIMER/LIPID COMPLEX · PROTEIN (BACTERIORHODOPSIN) (chains A,B,C) | unmapped |
| EV-PDB-1BRX-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 5.6 · ligands RET BACTERIORHODOPSIN/LIPID COMPLEX · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1C8R-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN D96N BR STATE AT 2.0 A RESOLUTION · PROTEIN (BACTERIORHODOPSIN) (chains A) | unmapped |
| EV-PDB-1C8S-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN D96N LATE M STATE INTERMEDIATE · BACTERIORHODOPSIN ("M" STATE INTERMEDIATE) (chains A) | unmapped |
| EV-PDB-1CWQ-1 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -173.15 °C · pH 5.6 · ligands HEX, OCT, RET, TRD, UND M INTERMEDIATE STRUCTURE OF THE WILD TYPE BACTERIORHODOPSIN IN COMBINATION WITH THE GROUND STATE STRUCTURE · BACTERIORHODOPSIN ("M" STATE INTERMEDIATE IN COMBINATION WITH GROUND STATE) (chains A,B) | unmapped |
| EV-PDB-1DZE-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 5.2 · ligands L1P, L2P, L3P, L4P, RET, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Structure of the M Intermediate of Bacteriorhodopsin trapped at 100K · BACTERIORHODOPSIN (M INTERMEDIATE) (chains A) | unmapped |
| EV-PDB-1F50-1 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN-BR STATE OF THE E204Q MUTANT AT 1.7 ANGSTROM RESOLUTION · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1FBB-1 RCSB PDB | microed | resolution: 3.2 Å | in vitro · -180.15 °C · pH 7 · ligands RET CRYSTAL STRUCTURE OF NATIVE CONFORMATION OF BACTERIORHODOPSIN · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1IW6-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 5.2 · ligands L2P, L3P, RET, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal Structure of the Ground State of Bacteriorhodopsin · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1IW9-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 5.2 · ligands L2P, L3P, RET, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal Structure of the M Intermediate of Bacteriorhodopsin · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1IXF-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 5.2 · ligands L2P, L3P, RET, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal Structure of the K intermediate of bacteriorhodopsin · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1JV6-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET BACTERIORHODOPSIN D85S/F219L DOUBLE MUTANT AT 2.00 ANGSTROM RESOLUTION · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1JV7-1 RCSB PDB | xray | resolution: 2.25 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET BACTERIORHODOPSIN O-LIKE INTERMEDIATE STATE OF THE D85S MUTANT AT 2.25 ANGSTROM RESOLUTION · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1KG8-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET X-ray structure of an early-M intermediate of bacteriorhodopsin · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1KG9-1 RCSB PDB | xray | resolution: 1.81 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET Structure of a "mock-trapped" early-M intermediate of bacteriorhosopsin · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1KGB-1 RCSB PDB | xray | resolution: 1.65 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET structure of ground-state bacteriorhodopsin · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1L0M-1 RCSB PDB | nmr_structure | structure | in vitro · 19.85 °C · pH 6 Solution structure of Bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1M0K-1 RCSB PDB | xray | resolution: 1.43 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN K INTERMEDIATE AT 1.43 A RESOLUTION · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1M0L-1 RCSB PDB | xray | resolution: 1.47 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN/LIPID COMPLEX AT 1.47 A RESOLUTION · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1M0M-1 RCSB PDB | xray | resolution: 1.43 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN M1 INTERMEDIATE AT 1.43 A RESOLUTION · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1MGY-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 4.6 · ligands BR, K, LI1, RET Structure of the D85S mutant of bacteriorhodopsin with bromide bound · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1O0A-1 RCSB PDB | xray | resolution: 1.62 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN L INTERMEDIATE AT 1.62 A RESOLUTION · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1P8I-1 RCSB PDB | xray | resolution: 1.86 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU F219L BACTERIORHODOPSIN MUTANT · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1P8U-1 RCSB PDB | xray | resolution: 1.62 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN N' INTERMEDIATE AT 1.62 A RESOLUTION · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1PXR-1 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -163.15 °C · pH 3.5 · ligands RET Structure of Pro50Ala mutant of Bacteriorhodopsin · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1PXS-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -163.15 °C · pH 3.5 · ligands RET Structure of Met56Ala mutant of Bacteriorhodopsin · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1PY6-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · -163.15 °C · pH 3.5 · ligands RET Bacteriorhodopsin crystallized from bicells · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1Q5I-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 4 · ligands RET Crystal structure of bacteriorhodopsin mutant P186A crystallized from bicelles · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1QHJ-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · pH 5.6 · ligands PH1, RET X-RAY STRUCTURE OF BACTERIORHODOPSIN GROWN IN LIPIDIC CUBIC PHASES · PROTEIN (BACTERIORHODOPSIN) (chains A) | unmapped |
| EV-PDB-1QKO-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -163.15 °C · pH 5.6 · ligands RET HIGH RESOLUTION X-RAY STRUCTURE OF AN EARLY INTERMEDIATE IN THE BACTERIORHODOPSIN PHOTOCYCLE · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1QKP-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -163.15 °C · pH 5.6 · ligands RET HIGH RESOLUTION X-RAY STRUCTURE OF AN EARLY INTERMEDIATE IN THE BACTERIORHODOPSIN PHOTOCYCLE · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1QM8-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 5.2 · ligands L1P, L2P, L3P, L4P, RET, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Structure of Bacteriorhodopsin at 100 K · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1R2N-1 RCSB PDB | nmr_structure | structure | in vitro · 34.85 °C · pH 6.5 · ligands RET NMR structure of the all-trans retinal in dark-adapted Bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1S52-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 3.7 · ligands RET Thr24Val Bacteriorhodopsin · bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1S51-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 3.7 · ligands RET Thr24Ser Bacteriorhodopsin · bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1R84-1 RCSB PDB | nmr_structure | structure | in vitro · 34.85 °C · pH 6.5 · ligands RET NMR structure of the 13-cis-15-syn retinal in dark_adapted bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1Q5J-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -173.15 °C · pH 3.7 · ligands RET Crystal structure of bacteriorhodopsin mutant P91A crystallized from bicelles · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1P8H-1 RCSB PDB | xray | resolution: 1.52 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN M1 INTERMEDIATE PRODUCED AT ROOM TEMPERATURE · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1KME-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -163.15 °C · pH 3.5 · ligands BGC, RET, SQU CRYSTAL STRUCTURE OF BACTERIORHODOPSIN CRYSTALLIZED FROM BICELLES · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1FBK-1 RCSB PDB | microed | resolution: 3.2 Å | in vitro · -180.15 °C · pH 7 · ligands RET CRYSTAL STRUCTURE OF CYTOPLASMICALLY OPEN CONFORMATION OF BACTERIORHODOPSIN · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1F4Z-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN-M PHOTOINTERMEDIATE STATE OF THE E204Q MUTANT AT 1.8 ANGSTROM RESOLUTION · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1E0P-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · -163.15 °C · pH 5.6 · ligands RET L intermediate of bacteriorhodopsin · BACTERIORHODOPSIN, GROUND STATE (chains A) | unmapped |
| EV-PDB-1C3W-1 RCSB PDB | xray | resolution: 1.55 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU BACTERIORHODOPSIN/LIPID COMPLEX AT 1.55 A RESOLUTION · BACTERIORHODOPSIN (GROUND STATE WILD TYPE "BR") (chains A) | unmapped |
| EV-PDB-1S53-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 3.7 · ligands RET Thr46Ser Bacteriorhodopsin · bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1S54-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 3.7 · ligands RET Thr24Ala Bacteriorhodopsin · bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1S8J-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · ligands LI1, NO3, RET Nitrate-bound D85S mutant of bacteriorhodopsin · Bacteriorhodopsin precursor (chains A) | unmapped |
| EV-PDB-1TN0-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 4 · ligands RET Structure of bacterorhodopsin mutant A51P · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1UCQ-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 5.2 · ligands L2P, L3P, RET, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal structure of the L intermediate of bacteriorhodopsin · bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1VJM-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 5.6 · ligands RET Deformation of helix C in the low-temperature L-intermediate of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1X0I-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 2 · ligands L2P, L3P, RET, SO4 Crystal Structure of the Acid Blue Form of Bacteriorhodopsin · Bacteriorhodopsin (chains 1) | unmapped |
| EV-PDB-1X0K-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · -173.15 °C · pH 10 · ligands L2P, L3P, RET, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal Structure of Bacteriorhodopsin at pH 10 · Bacteriorhodopsin (chains 1) | unmapped |
| EV-PDB-1X0S-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 5.2 · ligands L2P, L3P, RET, SO4, branched: beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal structure of the 13-cis isomer of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2BRD-1 RCSB PDB | microed | resolution: 3.5 Å | in vitro · ligands DPG, RET CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN PURPLE MEMBRANE · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-2I20-1 RCSB PDB | xray | resolution: 2.08 Å | in vitro · -173.15 °C · pH 8.5 · ligands LI1, RET, SQU Bacteriorhodopsin/lipid complex, M state of D96A mutant · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2I21-1 RCSB PDB | xray | resolution: 1.84 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU Bacteriorhodopsin/lipid complex, T46V mutant · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2NTU-1 RCSB PDB | xray | resolution: 1.53 Å | in vitro · -173.15 °C · pH 5.6 · ligands RET Bacteriorhodopsin, wild type, before illumination · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2WJK-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET Bacteriorhodopsin mutant E204D · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2ZFE-1 RCSB PDB | xray | resolution: 2.5 Å | in vitro · -173.15 °C · pH 5.2 · ligands L1P, L2P, L3P, RET, XE, branched: 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal structure of bacteriorhodopsin-xenon complex · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3COC-1 RCSB PDB | xray | resolution: 2.31 Å | in vitro · -173.15 °C · pH 4.5 · ligands RET Crystal Structure of D115A mutant of Bacteriorhodopsin · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-3COD-1 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 3.7 · ligands RET Crystal Structure of T90A/D115A mutant of Bacteriorhodopsin · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-3HAO-1 RCSB PDB | xray | resolution: 2.49 Å | in vitro · -173.15 °C · pH 3.7 · ligands RET Crystal structure of bacteriorhodopsin mutant L94A crystallized from bicelles · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-3HAS-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · pH 4 · ligands CPS, D10, D12, HP6, OCT, R16, RET Crystal structure of bacteriorhodopsin mutant L152A crystallized from bicelles · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3MBV-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · ligands BXC, RET Structure of bacterirhodopsin crystallized in betta-XylOC(16+4) meso phase · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3NS0-1 RCSB PDB | xray | resolution: 1.78 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET X-ray structure of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3NSB-1 RCSB PDB | xray | resolution: 1.78 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET Structure of bacteriorhodopsin ground state before and after X-ray modification · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3T45-1 RCSB PDB | xray | resolution: 3.01 Å | in vitro · -173.15 °C · pH 3.6 · ligands LI1, RET Crystal structure of bacteriorhodopsin mutant A215T, a phototaxis signaling mutant at 3.0 A resolution · Bacteriorhodopsin (GROUND STATE) (chains A,B,C) | unmapped |
| EV-PDB-3UTV-1 RCSB PDB | xray | resolution: 2.06 Å | in vitro · -173.15 °C · pH 4 · ligands MC3, RET Crystal structure of bacteriorhodopsin mutant Y57F · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3UTW-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · -173.15 °C · pH 4 · ligands BOG, MC3, RET Crystal structure of bacteriorhodopsin mutant P50A/Y57F · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3UTX-1 RCSB PDB | xray | resolution: 2.47 Å | in vitro · -173.15 °C · pH 4 · ligands D12, RET Crystal structure of bacteriorhodopsin mutant T46A · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-3VI0-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 5.2 · ligands L2P, RET, SOG, branched: 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-4FPD-1 RCSB PDB | xray | resolution: 2.65 Å | in vitro · -173.15 °C · pH 5.5 · ligands CL, LI1, RET Deprotonation of D96 in bacteriorhodopsin opens the proton uptake pathway · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-4HWL-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 3.4 · ligands GOL, HEX, HP6, RET Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-7 DMPC Bicelle · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-4HYX-1 RCSB PDB | xray | resolution: 1.99 Å | in vitro · -173.15 °C · pH 3.4 · ligands C14, D10, GOL, HEX, OCT, RET Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-4 DMPC Bicelle · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-4MD1-1 RCSB PDB | xray | resolution: 1.73 Å | in vitro · -173.15 °C · pH 5.6 · ligands L2P, RET, SQL Orange species of bacteriorhodopsin from Halobacterium salinarum · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-4MD2-1 RCSB PDB | xray | resolution: 1.73 Å | in vitro · -173.15 °C · pH 5.6 · ligands L2P, RET, SQL Ground state of bacteriorhodopsin from Halobacterium salinarum · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-4X32-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET Bacteriorhodopsin ground state structure collected in cryo conditions from crystals obtained in LCP with PEG as a precipitant. · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-4XXJ-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · -173.15 °C · ligands LFA, MPG Crystal Structure of Escherichia coli-Expressed Halobacterium salinarum Bacteriorhodopsin in the Trimeric Form · Bacteriorhodopsin (chains A,B,C) | unmapped |
| EV-PDB-4X31-1 RCSB PDB | xray | resolution: 2.4 Å | in vitro · 20.85 °C · pH 5.6 · ligands LI1, RET Room temperature structure of bacteriorhodopsin from lipidic cubic phase obtained with serial millisecond crystallography using synchrotron radiation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-4OV0-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 5.6 · ligands RET Structure of Bacteriorhdopsin Transferred from Amphipol A8-35 to a Lipidic Mesophase · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3VHZ-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 5.2 · ligands L2P, RET, SOG, branched: 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Crystal structure of the trans isomer of the L93A mutant of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3UTY-1 RCSB PDB | xray | resolution: 2.37 Å | in vitro · -173.15 °C · pH 4 · ligands D12, RET Crystal structure of bacteriorhodopsin mutant P50A/T46A · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-3HAR-1 RCSB PDB | xray | resolution: 1.7 Å | in vitro · -173.15 °C · pH 3.8 · ligands CPS, RET Crystal structure of bacteriorhodopsin mutant I148V crystallized from bicelles · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3HAQ-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 3.9 · ligands CPS, D10, D12, DD9, HP6, R16, RET Crystal structure of bacteriorhodopsin mutant I148A crystallized from bicelles · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3HAP-1 RCSB PDB | xray | resolution: 1.6 Å | in vitro · -173.15 °C · pH 4 · ligands CPS, D10, D12, DD9, HP6, R16, RET Crystal structure of bacteriorhodopsin mutant L111A crystallized from bicelles · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-3HAN-1 RCSB PDB | xray | resolution: 2.75 Å | in vitro · -173.15 °C · ligands RET Crystal structure of bacteriorhodopsin mutant V49A crystallized from bicelles · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2ZZL-1 RCSB PDB | xray | resolution: 2.03 Å | in vitro · -173.15 °C · pH 5.2 · ligands L1P, L2P, L3P, RET, SOG, branched: 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose Structure of bacteriorhodopsin's M intermediate at pH 7 · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2WJL-1 RCSB PDB | xray | resolution: 2.15 Å | in vitro · -173.15 °C · pH 5.6 · ligands RET Bacteriorhodopsin mutant E194D · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2NTW-1 RCSB PDB | xray | resolution: 1.53 Å | in vitro · -173.15 °C · pH 5.6 · ligands RET Bacteriorhodopsin, wild type, after illumination to produce the L intermediate · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2I1X-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · pH 5.6 · ligands LI1, RET, SQU Bacteriorhodopsin/lipid complex, D96A mutant · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-2AT9-1 RCSB PDB | microed | resolution: 3 Å | in vitro · ligands 2DP, RET STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM BY ELECTRON CRYSTALLOGRAPHY · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-1XJI-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 3.7 · ligands C14, CPS, D10, D12, OCT, RET Bacteriorhodopsin crystallized in bicelles at room temperature · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-1TN5-1 RCSB PDB | xray | resolution: 2.2 Å | in vitro · -173.15 °C · pH 4 · ligands RET Structure of bacterorhodopsin mutant K41P · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-1S8L-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · -173.15 °C · pH 4.6 · ligands LI1, RET Anion-free form of the D85S mutant of bacteriorhodopsin from crystals grown in the presence of halide · Bacteriorhodopsin precursor (chains A) | unmapped |
| EV-PDB-5A44-1 RCSB PDB | xray | resolution: 2.29 Å | in vitro · -173.15 °C · ligands HP6, LI1, RET Structure of Bacteriorhodopsin obtained from 20um crystals by multi crystal data collection · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-5A45-1 RCSB PDB | xray | resolution: 2.57 Å | in vitro · -173.15 °C · ligands RET Structure of Bacteriorhodopsin obtained from 5um crystals by multi crystal data collection · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-5B34-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · ligands 4QL, D10, D12, DD9, HP6, OCT, R16, RET Serial Femtosecond Crystallography (SFX) of Ground State Bacteriorhodopsin Crystallized from Bicelles in Complex with Iodine-labeled Detergent HAD13a Determined Using 7-keV X-ray Free Electron Laser (XFEL) at SACLA · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5B35-1 RCSB PDB | xray | resolution: 2.35 Å | in vitro · 19.85 °C · ligands 4QM, D10, D12, DD9, HP6, OCT, R16, RET Serial Femtosecond Crystallography (SFX) of Ground State Bacteriorhodopsin Crystallized from Bicelles Determined Using 7-keV X-ray Free Electron Laser (XFEL) at SACLA · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5B6V-1 RCSB PDB | xray | resolution: 2 Å | in vitro · 19.85 °C · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: resting state structure · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5B6W-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 16 ns after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5B6X-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 760 ns after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5B6Y-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 36.2 us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5B6Z-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 1.725 ms us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5BR2-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · -173.15 °C · ligands RET Structure of bacteriorhodopsin crystallized from ND-MSP1 · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5BR5-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · ligands RET Structure of bacteriorhodopsin crystallized from ND-MSP1E3D1 · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2H-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 40 ns after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2I-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 110 ns after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2J-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 290 ns after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2K-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 2 us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2L-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 5.25 us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2M-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 13.8 us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2N-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 95.2 us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2O-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 250 us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5H2P-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.4 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 657 us after photoexcitation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5VN7-1 RCSB PDB | xray | resolution: 2.7 Å | in vitro · -173.15 °C · pH 5.6 Structure of bacteriorhodopsin from crystals grown at 20 deg Celcius using GlyNCOC15+4 as an LCP host lipid · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-5VN9-1 RCSB PDB | xray | resolution: 2.594 Å | in vitro · -173.15 °C · pH 5.6 Structure of bacteriorhodopsin from crystals grown at 4 deg C using GlyNCOC15+4 as an LCP host lipid · Bacteriorhodopsin (chains A,B) | unmapped |
| EV-PDB-5ZIL-1 RCSB PDB | xray | resolution: 1.29 Å | in vitro · -258.15 °C · pH 5.6 · ligands L2P, RET Crystal structure of bacteriorhodopsin at 1.29 A resolution · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5ZIM-1 RCSB PDB | xray | resolution: 1.25 Å | in vitro · -258.15 °C · ligands L2P, RET Crystal structure of bacteriorhodopsin at 1.25 A resolution · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5ZIN-1 RCSB PDB | xray | resolution: 1.27 Å | in vitro · -258.15 °C · ligands L2P, RET Crystal structure of bacteriorhodopsin at 1.27 A resolution · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6G7I-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 49-406 fs state structure · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6G7J-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 457-646 fs state structure · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6G7K-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 10 ps state structure · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6G7L-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: 8.3 ms state structure · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA1-1 RCSB PDB | xray | resolution: 1.7 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND Bacteriorhodopsin, dark state, cell 1 · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA2-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND Bacteriorhodopsin, dark state, cell 2 · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA3-1 RCSB PDB | xray | resolution: 2.1 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND Bacteriorhodopsin, 33 ms state, ensemble refinement · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA4-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND Bacteriorhodopsin, 1 ps state, real-space refined against 15% extrapolated map · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA5-1 RCSB PDB | xray | resolution: 1.9 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND Bacteriorhodopsin, 3 ps state, REAL-SPACE REFINEMED AGAINST 10% EXTRAPOLATED MAP · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA6-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND Bacteriorhodopsin, 10 ps state, real-space refined against 10% extrapolated map · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA7-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 240FS STATE, REAL-SPACE REFINED AGAINST 10% EXTRAPOLATED MAP · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA8-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 330 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GA9-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 390 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAA-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 430 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAD-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.8 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 530 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAE-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.8 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 560 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAF-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.8 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 590 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAG-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.8 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 630 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAH-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.8 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 680 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAI-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.8 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 740 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6RMK-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · ligands RET Bacteriorhodopsin, dark state, cell 2, refined using the same protocol as sub-ps time delays · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAC-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.8 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 490 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6GAB-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · pH 5.6 · ligands C14, D10, DD9, HP6, L2P, MYS, OCT, RET, TRD, UND BACTERIORHODOPSIN, 460 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6G7H-1 RCSB PDB | xray | resolution: 1.5 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Retinal isomerization in bacteriorhodopsin revealed by a femtosecond X-ray laser: resting state structure · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-5J7A-1 RCSB PDB | xray | resolution: 2.3 Å | in vitro · 19.85 °C · pH 5.6 · ligands LI1, RET Bacteriorhodopsin ground state structure obtained with Serial Femtosecond Crystallography · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7Z09-1 RCSB PDB | xray | resolution: 1.05 Å | in vitro · -173.15 °C · pH 5.6 · ligands LFA, OLA, OLC Crystal structure of the ground state of bacteriorhodopsin at 1.05 Angstrom resolution · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9J-1 RCSB PDB | xray | resolution: 1.76 Å | in vitro · 19.85 °C · ligands LI1, OLC, RET Laser excitation effects on BR: Extrapolated 10ps Light dataset recorded at 1281 GW/cm2 at SACLA (+100ps, 1ns, 10ns) · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9I-1 RCSB PDB | xray | resolution: 1.6 Å | in vitro · 19.85 °C · pH 5.6 · ligands LI1, OLC, RET Laser excitation effects on BR: Dark dataset recorded at SACLA · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9H-1 RCSB PDB | xray | resolution: 1.66 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Laser excitation effects on BR: Reprocessed Extrapolated 10ps Light dataset recorded at 525 GW/cm2 from Nogly et al. · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9G-1 RCSB PDB | xray | resolution: 1.44 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Laser excitation effects on BR: Reprocessed Dark from Nogly et al. · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9F-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · ligands LI1, OLC, RET Laser excitation effects on BR: Extrapolated 6 ps Light dataset recorded at 2493 GW/cm2 at SwissFEL · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9E-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 19.85 °C · ligands LI1, OLC, RET Laser excitation effects on BR: Extrapolated 6 ps Light dataset recorded at 342 GW/cm2 at SwissFEL · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9D-1 RCSB PDB | xray | resolution: 1.7 Å | in vitro · 24.85 °C · ligands LI1, OLC, RET Laser excitation effects on BR: Dark dataset recorded at SwissFEL · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9C-1 RCSB PDB | xray | resolution: 2 Å | in vitro · 19.85 °C · ligands LI1, OLC, RET Laser excitation effects on BR: Reprocessed Extrapolated 16 ns Light dataset recorded at 0.04 GW/cm2 from Nango et al. · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9F9B-1 RCSB PDB | xray | resolution: 2 Å | in vitro · 19.85 °C · ligands LI1, OLC, RET Laser excitation effects on BR: reprocessed dark dataset recorded from Nango et al. · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-9A29-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate M2 of bacteriorhodopsin from 0.5 to 5 millisecond · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-9A28-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate M1 of bacteriorhodopsin from 10 to 1000 microsecond with a flooded cytoplasmic half channel · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-9A27-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate L of bacteriorhodopsin from 1 to 100 microsecond with a flattened 13-cis retinal · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-9A26-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate K of bacteriorhodopsin from 3 picosecond to 2 microsecond with a lifetime of more than five decades · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-9A23-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate J of bacteriorhodopsin from 1 to 30 picosecond with a contracted retinal binding pocket · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-9A22-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate J' of bacteriorhodopsin from 0.5 to 2 picosecond immediately after photoisomerization · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-9A21-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate I of bacteriorhodopsin at ~400 femtosecond with an expanded retinal binding pocket · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-9A1Z-1 RCSB PDB | integrative | structure | in vitro · ligands RET Photoinduced intermediate I' of bacteriorhodopsin at ~30 femtosecond with Schiff base nitrogen in a sharp U-turn · BACTERIORHODOPSIN (chains A) | unmapped |
| EV-PDB-7Z0E-1 RCSB PDB | xray | resolution: 1.22 Å | in vitro · -173.15 °C · ligands L2P, LFA, OLC, SQL Crystal structure of the M state of bacteriorhodopsin at 1.22 Angstrom resolution · Bacteriorhodopsin (chains P) | unmapped |
| EV-PDB-7Z0D-1 RCSB PDB | xray | resolution: 1.2 Å | in vitro · -173.15 °C · ligands LFA, OLA, OLC Crystal structure of the L state of bacteriorhodopsin at 1.20 Angstrom resolution · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7Z0C-1 RCSB PDB | xray | resolution: 1.53 Å | in vitro · -173.15 °C · ligands LFA, OLA, OLC Crystal structure of the K state of bacteriorhodopsin at 1.53 Angstrom resolution · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7Z0A-1 RCSB PDB | xray | resolution: 1.22 Å | in vitro · -173.15 °C · ligands LFA, OLA, OLC Crystal structure of the ground state of bacteriorhodopsin at 1.22 Angstrom resolution · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7XJE-1 RCSB PDB | xray | resolution: 1.33 Å | in vitro · -258.15 °C · ligands L2P, RET Crystal structure of bacteriorhodopsin in the K state refined against the extrapolated dataset · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7XJD-1 RCSB PDB | xray | resolution: 1.33 Å | in vitro · -258.15 °C · pH 5.6 · ligands L2P, RET, SQU Crystal structure of bacteriorhodopsin in the ground state by red laser irradiation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7XJC-1 RCSB PDB | xray | resolution: 1.33 Å | in vitro · -258.15 °C · pH 5.6 · ligands L2P, RET, SQU Crystal structure of bacteriorhodopsin in the ground and K states after green laser irradiation · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7VSO-1 RCSB PDB | xray | resolution: 2.35 Å | in vitro · 19.85 °C · ligands 7YH, CPS, D10, D12, DD9, HP6, IOD, OCT, R16, RET Serial Femtosecond Crystallography (SFX) of Ground State Bacteriorhodopsin Crystallized from Bicelles in Complex with HAD16 Determined Using 7-keV X-ray Free Electron Laser (XFEL) at SACLA · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7Q38-1 RCSB PDB | xray | resolution: 1.65 Å | in vitro · -173.15 °C · ligands AR, HEX, LFA, OLA, OLC, RET, SO4 Crystal structure of the mutant bacteriorhodopsin pressurized with argon · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-7Q35-1 RCSB PDB | xray | resolution: 2 Å | in vitro · -173.15 °C · ligands HEX, KR, LFA, OLA, RET, SO4 Crystal structure of the mutant bacteriorhodopsin pressurized with krypton · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6RQP-1 RCSB PDB | xray | resolution: 1.8 Å | in vitro · 24.85 °C · pH 5.6 · ligands LI1, OLC, RET Steady-state-SMX dark state structure of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6RQO-1 RCSB PDB | xray | resolution: 2 Å | in vitro · 24.85 °C · pH 5.6 · ligands RET Steady-state-SMX activated state structure of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6RPH-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · 24.85 °C · pH 5.6 · ligands RET TR-SMX open state structure (10-15ms) of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-PDB-6RNJ-1 RCSB PDB | xray | resolution: 2.6 Å | in vitro · 24.85 °C · pH 5.6 · ligands RET TR-SMX closed state structure (0-5ms) of bacteriorhodopsin · Bacteriorhodopsin (chains A) | unmapped |
| EV-BMRB-1162 BMRB | nmr_shifts | chemical_shift | in vitro · 29.85 °C · pH 8 Sequence-specific 1H-NMR assignment and conformation of proteolytic fragment 163-231 of bacterioopsin · BMRB data: 1H chemical shifts | unmapped |
| EV-BMRB-17361 BMRB | nmr_shifts | chemical_shift | in vitro · 4.85 °C · pH 6 The Conformation of Bacteriorhodopsin Loops in Purple Membranes resolved by Solid-state MAS-NMR · BMRB data: 13C chemical shifts, 15N chemical shifts | unmapped |
| EV-BMRB-2580 BMRB | nmr_shifts | chemical_shift | in vitro · 29.85 °C · pH 6.8 Sequence-specific resonance assignment and secondary structure of (1-71) bacterioopsin · BMRB data: 1H chemical shifts | unmapped |
| EV-BMRB-50009 BMRB | nmr_shifts | chemical_shift | in vitro · 46.85 °C · pH 6.4 Backbone and methyl assignment of bacteriorhodopsin incorporated into nanodiscs · BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts | unmapped |
| EV-SASBDB-SASDJD4 SASBDB | saxs_sans | radius_of_gyration: 2.72 nm ± 0.034 | in vitro · 22 °C · pH 5.6 Direct localization of detergents and bacteriorhodopsin in the lipidic cubic phase by small-angle neutron scattering · Bacteriorhodopsin | unmapped |
| EV-SASBDB-SASDJE4 SASBDB | saxs_sans | radius_of_gyration: 2.68 nm ± 0.11 | in vitro · 22 °C · pH 5.6 Direct localization of detergents and bacteriorhodopsin in the lipidic cubic phase by small-angle neutron scattering · Bacteriorhodopsin | unmapped |
| EV-AFDB-AF-P02945-F1 AlphaFold DB | af_prediction | plddt: 91.75 pLDDT | in silico AlphaFold DB prediction AF-P02945-F1 · AlphaFold Monomer v2.0 pipeline, residues 1-262 | unmapped |
| EV-SMASH-SMFS-000435 SMASH-BIO | force_spectroscopy | study_record | in vitro Emerging Patterns in Membrane Protein Folding Pathways. · Bacteriorhodopsin; afm smfs; experiment class: membrane_mechanics, unfolding_protein | unmapped |
| EV-SMASH-SMFS-000912-r1 SMASH-BIO | force_spectroscopy | dwell_time: 38 ms ± 3 | in vitro · pH 7.8 Quantifying a light-induced energetic change in bacteriorhodopsin by force spectroscopy. · Bacteriorhodopsin (bR) S248C, DBCO-labelled, in native purple membrane (C-terminal 8 aa of helix G (unfolding probed)); Bacteriorhodopsin triple mutant; afm smfs; experiment class: unfolding_protein; result applies to Bacteriorhodopsin | unmapped |
| EV-SMASH-SMFS-000912-r2 SMASH-BIO | force_spectroscopy | dwell_time: 139 ms ± 2 | in vitro · pH 7.8 Quantifying a light-induced energetic change in bacteriorhodopsin by force spectroscopy. · Bacteriorhodopsin (bR) S248C, DBCO-labelled, in native purple membrane (C-terminal 8 aa of helix G (unfolding probed)); Bacteriorhodopsin triple mutant; afm smfs; experiment class: unfolding_protein; result applies to Bacteriorhodopsin | unmapped |
| EV-SMASH-SMFS-000912-r3 SMASH-BIO | force_spectroscopy | dwell_time: 5 ms ± 2 | in vitro · pH 7.8 Quantifying a light-induced energetic change in bacteriorhodopsin by force spectroscopy. · Bacteriorhodopsin (bR) S248C, DBCO-labelled, in native purple membrane (C-terminal 8 aa of helix G (unfolding probed)); Bacteriorhodopsin triple mutant; afm smfs; experiment class: unfolding_protein; result applies to Bacteriorhodopsin | unmapped |
| EV-SMASH-SMFS-001158 SMASH-BIO | force_spectroscopy | study_record | in vitro Factors That Control the Force Needed to Unfold a Membrane Protein in Silico Depend on the Mode of Denaturation. · Bacteriorhodopsin; magnetic tweezers; experiment class: receptor_ligand_adhesion, unfolding_protein | unmapped |
| EV-SMASH-SMFS-001938-r0 SMASH-BIO | force_spectroscopy | folding_free_energy: 2.3 kcal/mol ± 0.6 | in vitro Free-energy changes of bacteriorhodopsin point mutants measured by single-molecule force spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-001938-r1 SMASH-BIO | force_spectroscopy | folding_free_energy: 2.4 kcal/mol ± 0.6 | in vitro Free-energy changes of bacteriorhodopsin point mutants measured by single-molecule force spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-002342 SMASH-BIO | force_spectroscopy | study_record | in vitro Extension-Dependent Drift Velocity and Diffusion (DrDiff) Directly Reconstructs the Folding Free Energy Landscape of Atomic Force Microscopy Experiments. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_nucleic_acid, unfolding_protein | unmapped |
| EV-SMASH-SMFS-002503 SMASH-BIO | force_spectroscopy | study_record | in vitro Quantifying the Native Energetics Stabilizing Bacteriorhodopsin by Single-Molecule Force Spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-002832 SMASH-BIO | force_spectroscopy | study_record | in vitro On the Interpretation of Force-Induced Unfolding Studies of Membrane Proteins Using Fast Simulations. · Bacteriorhodopsin; magnetic tweezers; experiment class: receptor_ligand_adhesion, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003135-r0 SMASH-BIO | force_spectroscopy | folding_free_energy: 1 kcal/mol ± 0.1 | in vitro Improved free-energy landscape reconstruction of bacteriorhodopsin highlights local variations in unfolding energy. · Bacteriorhodopsin; afm smfs; experiment class: membrane_mechanics, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003467 SMASH-BIO | force_spectroscopy | study_record | in vitro Directly watching biomolecules in action by high-speed atomic force microscopy. · Bacteriorhodopsin; optical tweezers; experiment class: force_generation_motor | unmapped |
| EV-SMASH-SMFS-003530 SMASH-BIO | force_spectroscopy | study_record | in vitro Hidden dynamics in the unfolding of individual bacteriorhodopsin proteins. · Bacteriorhodopsin; afm smfs; experiment class: membrane_mechanics, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003535 SMASH-BIO | force_spectroscopy | study_record | in vitro High-Resolution Imaging and Multiparametric Characterization of Native Membranes by Combining Confocal Microscopy and an Atomic Force Microscopy-Based Toolbox. · Bacteriorhodopsin; afm smfs; experiment class: receptor_ligand_adhesion, rheology_cell, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003908 SMASH-BIO | force_spectroscopy | study_record | in vitro Forced Unfolding Mechanism of Bacteriorhodopsin as Revealed by Coarse-Grained Molecular Dynamics. · Bacteriorhodopsin; afm smfs; experiment class: membrane_mechanics, unfolding_protein | unmapped |
| EV-SMASH-SMFS-003997 SMASH-BIO | force_spectroscopy | study_record | in vitro Oriented Membrane Protein Reconstitution into Tethered Lipid Membranes for AFM Force Spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: membrane_mechanics, receptor_ligand_adhesion | unmapped |
| EV-SMASH-SMFS-004373 SMASH-BIO | force_spectroscopy | study_record | in vitro Single-molecule force spectroscopy of membrane proteins from membranes freely spanning across nanoscopic pores. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-004931 SMASH-BIO | force_spectroscopy | study_record | in vitro Mechanics of proteins with a focus on atomic force microscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-004938 SMASH-BIO | force_spectroscopy | study_record | in vitro Membrane protein stability depends on the concentration of compatible solutes--a single molecule force spectroscopic study. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005105 SMASH-BIO | force_spectroscopy | study_record | in vitro An Ultrastable AFM for Biophysics · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005173 SMASH-BIO | force_spectroscopy | study_record | in vitro Effect of the compatible solute ectoine on the stability of the membrane proteins. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005311 SMASH-BIO | force_spectroscopy | study_record | in vitro Reference-free alignment and sorting of single-molecule force spectroscopy data. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005332 SMASH-BIO | force_spectroscopy | study_record | in vitro Single-molecule force spectroscopy from nanodiscs: an assay to quantify folding, stability, and interactions of native membrane proteins. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005488 SMASH-BIO | force_spectroscopy | study_record | in vitro Efficient unfolding pattern recognition in single molecule force spectroscopy data. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005693 SMASH-BIO | force_spectroscopy | study_record | in vitro Velocity-dependent mechanical unfolding of bacteriorhodopsin is governed by a dynamic interaction network. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005698 SMASH-BIO | force_spectroscopy | study_record | in vitro pH-dependent bending in and out of purple membranes comprising BR-D85T. · Bacteriorhodopsin; afm smfs; experiment class: rheology_cell | unmapped |
| EV-SMASH-SMFS-005726 SMASH-BIO | force_spectroscopy | study_record | in vitro Bending of purple membranes in dependence on the pH analyzed by AFM and single molecule force spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-005753 SMASH-BIO | force_spectroscopy | study_record | in vitro Controlled ionic condensation at the surface of a native extremophile membrane. · Bacteriorhodopsin; force spectroscopy unspecified; experiment class: nucleic_acid_protein_interaction, rheology_cell | unmapped |
| EV-SMASH-SMFS-006026 SMASH-BIO | force_spectroscopy | study_record | in vitro Determination of protein structural flexibility by microsecond force spectroscopy. · Bacteriorhodopsin; force spectroscopy unspecified; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006283 SMASH-BIO | force_spectroscopy | study_record | in vitro Comparing proteins by their unfolding pattern. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006340 SMASH-BIO | force_spectroscopy | study_record | in vitro High-throughput single-molecule force spectroscopy for membrane proteins. · Bacteriorhodopsin; afm smfs; experiment class: rheology_cell, unfolding_protein | unmapped |
| EV-SMASH-SMFS-006378 SMASH-BIO | force_spectroscopy | study_record | in vitro Mechanical properties of bovine rhodopsin and bacteriorhodopsin: possible roles in folding and function. · Bacteriorhodopsin; force spectroscopy unspecified; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006416 SMASH-BIO | force_spectroscopy | study_record | in vitro Point mutations in membrane proteins reshape energy landscape and populate different unfolding pathways. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006440 SMASH-BIO | force_spectroscopy | study_record | in vitro Role of extracellular glutamic acids in the stability and energy landscape of bacteriorhodopsin. · Bacteriorhodopsin; force spectroscopy unspecified; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006511 SMASH-BIO | force_spectroscopy | study_record | in vitro A novel pattern recognition algorithm to classify membrane protein unfolding pathways with high-throughput single-molecule force spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006568 SMASH-BIO | force_spectroscopy | study_record | in vitro Electrostatic and steric interactions determine bacteriorhodopsin single-molecule biomechanics. · Bacteriorhodopsin; afm smfs; experiment class: rheology_cell, unfolding_protein | unmapped |
| EV-SMASH-SMFS-006602 SMASH-BIO | force_spectroscopy | study_record | in vitro Free energy of membrane protein unfolding derived from single-molecule force measurements. · Bacteriorhodopsin; force spectroscopy unspecified; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006666 SMASH-BIO | force_spectroscopy | study_record | in vitro Oriented purple membrane monolayers covalently attached to gold by multiple thiole linkages analyzed by single molecule force spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006751 SMASH-BIO | force_spectroscopy | study_record | in vitro Bacteriorhodopsin folds into the membrane against an external force. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006761 SMASH-BIO | force_spectroscopy | study_record | in vitro Characterizing molecular interactions in different bacteriorhodopsin assemblies by single-molecule force spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006880 SMASH-BIO | force_spectroscopy | study_record | in vitro Pulling single bacteriorhodopsin out of a membrane: Comparison of simulation and experiment. · Bacteriorhodopsin; force spectroscopy unspecified; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006891 SMASH-BIO | force_spectroscopy | study_record | in vitro Sequential unfolding of individual helices of bacterioopsin observed in molecular dynamics simulations of extraction from the purple membrane. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-006927 SMASH-BIO | force_spectroscopy | study_record | in vitro Unfolding barriers in bacteriorhodopsin probed from the cytoplasmic and the extracellular side by AFM. · Bacteriorhodopsin; afm smfs; experiment class: receptor_ligand_adhesion, rheology_cell, unfolding_protein | unmapped |
| EV-SMASH-SMFS-006946 SMASH-BIO | force_spectroscopy | study_record | in vitro Automated alignment and pattern recognition of single-molecule force spectroscopy data. · Bacteriorhodopsin; afm smfs; experiment class: receptor_ligand_adhesion, unfolding_protein | unmapped |
| EV-SMASH-SMFS-006954 SMASH-BIO | force_spectroscopy | study_record | in vitro Complex stability of single proteins explored by forced unfolding experiments. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-007021 SMASH-BIO | force_spectroscopy | study_record | in vitro Molecular force modulation spectroscopy revealing the dynamic response of single bacteriorhodopsins. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-007179 SMASH-BIO | force_spectroscopy | study_record | in vitro Probing the energy landscape of the membrane protein bacteriorhodopsin. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-007324 SMASH-BIO | force_spectroscopy | study_record | in vitro Unfolding pathways of native bacteriorhodopsin depend on temperature. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-007392 SMASH-BIO | force_spectroscopy | study_record | in vitro Stability of bacteriorhodopsin alpha-helices and loops analyzed by single-molecule force spectroscopy. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
| EV-SMASH-SMFS-007471 SMASH-BIO | force_spectroscopy | study_record | in vitro Atomic force microscopy of native purple membrane. · Bacteriorhodopsin; afm smfs; experiment class: membrane_mechanics | unmapped |
| EV-SMASH-SMFS-007533 SMASH-BIO | force_spectroscopy | study_record | in vitro Unfolding pathways of individual bacteriorhodopsins. · Bacteriorhodopsin; afm smfs; experiment class: unfolding_protein | unmapped |
Conflicts
No conflicts found among comparable evidence.
238 evidence items could not be compared: they lack a comparable observable type, a value, or an uncertainty. Absence of a conflict here is not agreement.