Human telomeric G-quadruplex d[AG3(T2AG3)3]
NAKB 143D · Homo sapiens · 22 nt
14evidence items
0mapped to a state
0states
2techniques
1sources
0conflicts
Coverage grid
Mapped evidence per state and technique. Shaded rows rest on a single technique. Badge = best data level in the cell: raw (traces, images, FIDs: can be re-analysed), proc (maps, curves, tables, trajectories) or rep (values in the paper only).
| State | Basis | xray | nmr_structure | Total |
|---|---|---|---|---|
| No states defined yet. | ||||
Unmapped evidence: 14 of 14 items. Mappings come from curator assignments and curated rules; see About for how rules work.
Sources
| Source | Evidence | Mapped |
|---|---|---|
| NAKB | 14 | 0 |
Structure
No state models are exported for this protein yet. Observed states export the representative PDB entry; inferred states need fitted models, not yet built.
States and transitions
No states defined.
| State | Basis | Parent | Description |
|---|
No transitions recorded in this version (no rate or free-energy evidence has been curated yet).
Evidence
One row per deposit or experiment. Filter by technique, environment or text. Unmapped evidence is listed too.
| Evidence | Technique | Observable | Conditions | Mapped to state |
|---|---|---|---|---|
| EV-NAKB-143D-1 NAKB | nmr_structure | structure | in vitro SOLUTION STRUCTURE OF THE HUMAN TELOMERIC REPEAT D(AG3[T2AG3]3) OF THE G-QUADRUPLEX · DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') (chains A); same sequence | unmapped |
| EV-NAKB-1KF1-1 NAKB | xray | resolution: 2.1 Å | in vitro Structure and Packing of Human Telomeric DNA · 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3 (chains A); same sequence | unmapped |
| EV-NAKB-2E4I-1 NAKB | nmr_structure | structure | in vitro Human Telomeric DNA mixed-parallel/antiparallel quadruplex under Physiological Ionic Conditions Stabilized by Proper Incorporation of 8-Bromoguanosines · DNA (5'-D(*DAP*(BGM)P*DGP*DGP*DTP*DTP*DAP*(BGM)P*DGP*DGP*DTP*DTP*DAP*(BGM)P*(BGM)P*DGP*DTP*DTP*DAP*(BGM)P*DGP*DG)-3') (chains A); same sequence | unmapped |
| EV-NAKB-2MCC-1 NAKB | nmr_structure | structure | in vitro · ligands RUL Structural studies on dinuclear ruthenium(II) complexes that bind diastereoselectively to an anti-parallel folded human telomere sequence · human_telomere_quadruplex (chains A); same sequence | unmapped |
| EV-NAKB-2MCO-1 NAKB | nmr_structure | structure | in vitro · ligands 2FJ Structural studies on dinuclear ruthenium(II) complexes that bind diastereoselectively to an anti-parallel folded human telomere sequence · human telomere quadruplex (chains A); same sequence | unmapped |
| EV-NAKB-3R6R-1 NAKB | xray | resolution: 2.4 Å | in vitro · ligands BER Structure of the complex of an intramolecular human telomeric DNA with Berberine formed in K+ solution · DNA (22-mer) (chains A); same sequence | unmapped |
| EV-NAKB-3SC8-1 NAKB | xray | resolution: 2.302 Å | in vitro · ligands R8G Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-3 · Human telomeric repeat sequence (chains A); same sequence | unmapped |
| EV-NAKB-3T5E-1 NAKB | xray | resolution: 2.1 Å | in vitro · ligands T5E Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-4 · human telomeric DNA sequence (chains A); same sequence | unmapped |
| EV-NAKB-3UYH-1 NAKB | xray | resolution: 1.95 Å | in vitro · ligands 0DX Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide compound, MM41 · human telomeric DNA sequence (chains A); same sequence | unmapped |
| EV-NAKB-4FXM-1 NAKB | xray | resolution: 1.651 Å | in vitro · ligands MMP Crystal structure of the complex of a human telomeric repeat G-quadruplex and N-methyl mesoporphyrin IX (P21212) · DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') (chains A); same sequence | unmapped |
| EV-NAKB-4G0F-1 NAKB | xray | resolution: 2.15 Å | in vitro · ligands MMP Crystal structure of the complex of a human telomeric repeat G-quadruplex and N-methyl mesoporphyrin IX (P6) · DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') (chains A); same sequence | unmapped |
| EV-NAKB-6IP3-1 NAKB | xray | resolution: 1.4 Å | in vitro Structure of human telomeric DNA at 1.4 Angstroms resolution · DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') (chains A); same sequence | unmapped |
| EV-NAKB-6XCL-1 NAKB | xray | resolution: 2.7 Å | in vitro · ligands EDO, V4A Crystal Structure of human telomeric DNA G-quadruplex in complex with a novel platinum(II) complex. · DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') (chains A,B); same sequence | unmapped |
| EV-NAKB-7KLP-1 NAKB | xray | resolution: 1.35 Å | in vitro · ligands P6G Crystal structure of a three-tetrad, parallel, K+ stabilized human telomeric G-quadruplex · telomeric DNA (chains A); same sequence | unmapped |
Conflicts
No conflicts found among comparable evidence.
14 evidence items could not be compared: they lack a comparable observable type, a value, or an uncertainty. Absence of a conflict here is not agreement.