{ "conflicts": [], "coverage": { "cells": { "MBP-closed-maltose": { "af_prediction": 0, "cryoem": 17, "force_spectroscopy": 0, "md": 0, "nmr_shifts": 0, "nmr_structure": 0, "saxs_sans": 0, "xray": 263 }, "MBP-open-apo": { "af_prediction": 0, "cryoem": 130, "force_spectroscopy": 0, "md": 0, "nmr_shifts": 0, "nmr_structure": 0, "saxs_sans": 0, "xray": 116 } }, "data_levels": { "MBP-closed-maltose": { "cryoem": "processed", "xray": "processed" }, "MBP-open-apo": { "cryoem": "processed", "xray": "processed" } }, "single_method_states": [], "states": [ "MBP-open-apo", "MBP-closed-maltose" ], "techniques": [ "xray", "cryoem", "nmr_structure", "nmr_shifts", "saxs_sans", "force_spectroscopy", "af_prediction", "md" ], "unmapped_evidence": 40 }, "curation": { "as_of": "2026-10-19", "curator": "draft (unreviewed)", "file": "P0AEX9.yaml", "status": "draft" }, "evidence": [ { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": 16.85 }, "construct": { "description": "MALE-B363 (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1A7L", "evidence_id": "EV-PDB-1A7L-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "1A7L", "doi": "10.1006/jmbi.1998.1866", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1A7L" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "DOMINANT B-CELL EPITOPE FROM THE PRES2 REGION OF HEPATITIS B VIRUS IN THE FORM OF AN INSERTED PEPTIDE SEGMENT IN MALTODEXTRIN-BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": 13.85 }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1ANF", "evidence_id": "EV-PDB-1ANF-1", "mappings": [ { "confidence": "high", "justification": "Maltose-bound closed structure; representative for the closed state.", "rule": "curator_assignment", "state_id": "MBP-closed-maltose", "who": "curator:draft (unreviewed)" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.67 }, "provenance": { "deposit_id": "1ANF", "doi": "10.1016/S0969-2126(97)00253-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1ANF" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MALTODEXTRIN BINDING PROTEIN WITH BOUND MALTOSE" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-sorbitol" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.6, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1FQA", "evidence_id": "EV-PDB-1FQA-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "1FQA", "doi": "10.1006/jmbi.2001.4456", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1FQA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "STRUCTURE OF MALTOTETRAITOL BOUND TO OPEN-FORM MALTODEXTRIN BINDING PROTEIN IN P2(1)CRYSTAL FORM" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-D-glucose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1FQC", "evidence_id": "EV-PDB-1FQC-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "1FQC", "doi": "10.1006/jmbi.2001.4456", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1FQC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "CRYSTAL STRUCTURE OF MALTOTRIOTOL BOUND TO CLOSED-FORM MALTODEXTRIN BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-D-glucose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1FQD", "evidence_id": "EV-PDB-1FQD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "1FQD", "doi": "10.1006/jmbi.2001.4456", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1FQD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "CRYSTAL STRUCTURE OF MALTOTETRAITOL BOUND TO CLOSED-FORM MALTODEXTRIN BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1JVX", "evidence_id": "EV-PDB-1JVX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "1JVX", "doi": "10.1093/protein/15.11.895", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1JVX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Maltodextrin-binding protein variant D207C/A301GS/P316C cross-linked in crystal" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1JVY", "evidence_id": "EV-PDB-1JVY-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "1JVY", "doi": "10.1093/protein/15.11.895", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1JVY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Maltodextrin-binding protein variant D207C/A301GS/P316C with beta-mercaptoethanol mixed disulfides" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "MALTOSE-BINDING PROTEIN MUTANT MALE31 (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1LAX", "evidence_id": "EV-PDB-1LAX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.85 }, "provenance": { "deposit_id": "1LAX", "doi": "10.1110/ps.0235103", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1LAX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "CRYSTAL STRUCTURE OF MALE31, A DEFECTIVE FOLDING MUTANT OF MALTOSE-BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "XE" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1LLS", "evidence_id": "EV-PDB-1LLS-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "1LLS", "doi": "10.1016/S0022-2836(02)00739-8", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1LLS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "CRYSTAL STRUCTURE OF UNLIGANDED MALTOSE BINDING PROTEIN WITH XENON" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "MALTODEXTRIN BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MDQ", "evidence_id": "EV-PDB-1MDQ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "1MDQ", "doi": "10.1006/jmbi.1994.0059", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MDQ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "REFINED STRUCTURES OF TWO INSERTION(SLASH)DELETION MUTANTS PROBE FUNCTION OF THE MALTODEXTRIN BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.7, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "PROTEIN (HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA) (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MG1", "evidence_id": "EV-PDB-1MG1-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "1MG1", "doi": "10.1073/pnas.96.8.4319", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MG1" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MPB", "evidence_id": "EV-PDB-1MPB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "1MPB", "doi": "10.1006/jmbi.1996.0646", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MPB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MALTODEXTRIN-BINDING PROTEIN (MALTOSE-BINDING PROTEIN) MUTANT, WITH ARGININE REPLACING TRYPTOPHAN AT POSITION 230 (TRP-230-ARG)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MPC", "evidence_id": "EV-PDB-1MPC-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "1MPC", "doi": "10.1006/jmbi.1996.0646", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MPC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MALTODEXTRIN-BINDING PROTEIN (MALTOSE-BINDING PROTEIN) MUTANT, WITH ARGININE REPLACING TRYPTOPHAN AT POSITION 230 (TRP-230-ARG)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1NL5", "evidence_id": "EV-PDB-1NL5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "1NL5", "doi": "10.1074/jbc.M301004200", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1NL5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Engineered High-affinity Maltose-Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -180.15 }, "construct": { "description": "maltose-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1NMU", "evidence_id": "EV-PDB-1NMU-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.31 }, "provenance": { "deposit_id": "1NMU", "doi": "10.1016/S0022-2836(02)01476-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1NMU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-L30" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "D-MALTODEXTRIN BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1OMP", "evidence_id": "EV-PDB-1OMP-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "1OMP", "doi": "10.1021/bi00159a003", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1OMP" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "CRYSTALLOGRAPHIC EVIDENCE OF A LARGE LIGAND-INDUCED HINGE-TWIST MOTION BETWEEN THE TWO DOMAINS OF THE MALTODEXTRIN-BINDING PROTEIN INVOLVED IN ACTIVE TRANSPORT AND CHEMOTAXIS" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NI", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Chimera of Maltose-binding periplasmic protein and Argonaute 2 (chains A,P,Z)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1R6Z", "evidence_id": "EV-PDB-1R6Z-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "1R6Z", "doi": "10.1038/nsb1016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1R6Z" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The Crystal Structure of the Argonaute2 PAZ domain (as a MBP fusion)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1SVX", "evidence_id": "EV-PDB-1SVX-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.24 }, "provenance": { "deposit_id": "1SVX", "doi": "10.1038/nbt962", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1SVX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a designed selected Ankyrin Repeat protein in complex with the Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "Maltose binding protein fused with designed helical protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1Y4C", "evidence_id": "EV-PDB-1Y4C-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "1Y4C", "doi": "10.1073/pnas.0408890102", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1Y4C" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Designed Helical Protein fusion MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1YTV", "evidence_id": "EV-PDB-1YTV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "1YTV", "doi": "10.1107/S1744309105007293", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1YTV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Maltose-binding protein fusion to a C-terminal fragment of the V1a vasopressin receptor" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NI" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -168.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1ZIU", "evidence_id": "EV-PDB-1ZIU-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "1ZIU", "doi": "10.1016/j.jmb.2005.10.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1ZIU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of nickel-bound engineered Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1ZJL", "evidence_id": "EV-PDB-1ZJL-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "1ZJL", "doi": "10.1016/j.jmb.2005.10.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1ZJL" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of zinc-bound engineered maltose binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -168.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1ZKB", "evidence_id": "EV-PDB-1ZKB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "1ZKB", "doi": "10.1016/j.jmb.2005.10.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1ZKB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Zinc-free Engineered maltose binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CU" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -168.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1ZMG", "evidence_id": "EV-PDB-1ZMG-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "1ZMG", "doi": "10.1016/j.jmb.2005.10.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1ZMG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of copper-bound engineered maltose binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1MC1", "branched: alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Monobody P' (chains A,B,C,D,E,F)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/21DH", "evidence_id": "EV-PDB-21DH-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.57 }, "provenance": { "deposit_id": "21DH", "doi": "10.1107/S2053230X26000798", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/21DH" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused Monobody P' in complex with HPPU" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Leukocyte receptor cluster member 8 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/28WZ", "evidence_id": "EV-PDB-28WZ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.5 }, "provenance": { "deposit_id": "28WZ", "doi": "10.1038/s41586-026-10650-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/28WZ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the human LENG8-PCID2-SEM1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2N44", "evidence_id": "EV-PDB-2N44-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "2N44", "doi": "10.1038/nmeth.3455", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2N44" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "EC-NMR Structure of Escherichia coli Maltose-binding protein Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target ER690" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2MV0", "evidence_id": "EV-PDB-2MV0-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "2MV0", "doi": "10.1073/pnas.1203013109", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2MV0" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "Solution NMR Structure of Maltose-binding protein from Escherichia coli, Northeast Structural Genomics Consortium (NESG) Target ER690" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2KLF", "evidence_id": "EV-PDB-2KLF-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "2KLF", "doi": "10.1002/anie.200902561", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2KLF" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "PERE NMR structure of maltodextrin-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": 29.85 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2H25", "evidence_id": "EV-PDB-2H25-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "2H25", "doi": "10.1038/nmeth938", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2H25" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "Solution Structure of Maltose Binding Protein complexed with beta-cyclodextrin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2D21", "evidence_id": "EV-PDB-2D21-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "2D21", "doi": "10.1038/nature04525", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2D21" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "NMR Structure of stereo-array isotope labelled (SAIL) maltodextrin-binding protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Leukocyte receptor cluster member 8 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/28XA", "evidence_id": "EV-PDB-28XA-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.86 }, "provenance": { "deposit_id": "28XA", "doi": "10.1038/s41586-026-10650-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/28XA" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the human UAP56 NTD - LENG8-PCID2-SEM1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,SAC3 domain-containing protein 1 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/28WY", "evidence_id": "EV-PDB-28WY-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.6 }, "provenance": { "deposit_id": "28WY", "doi": "10.1038/s41586-026-10650-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/28WY" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the human SAC3D1-PCID2-SEM1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -180.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1T0K", "evidence_id": "EV-PDB-1T0K-3", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.24 }, "provenance": { "deposit_id": "1T0K", "doi": "10.1016/j.str.2004.04.023", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1T0K" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Joint X-ray and NMR Refinement of Yeast L30e-mRNA complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1PEB", "evidence_id": "EV-PDB-1PEB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "1PEB", "doi": "10.1074/jbc.M301004200", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1PEB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "LIGAND-FREE HIGH-AFFINITY MALTOSE-BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1N3X", "evidence_id": "EV-PDB-1N3X-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "1N3X", "doi": "10.1074/jbc.M301004200", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1N3X" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Ligand-free High-Affinity Maltose-Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1N3W", "evidence_id": "EV-PDB-1N3W-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "1N3W", "doi": "10.1074/jbc.M301004200", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1N3W" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Engineered High-Affinity Maltose-Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MPD", "evidence_id": "EV-PDB-1MPD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "1MPD", "doi": "10.1006/jmbi.1996.0646", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MPD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MALTODEXTRIN-BINDING PROTEIN (MALTOSE-BINDING PROTEIN) MUTANT, WITH ARGININE REPLACING TRYPTOPHAN AT POSITION 230 (TRP-230-ARG), COMPLEXED WITH MALTOSE" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltose binding-a1 homeodomain protein chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MH4", "evidence_id": "EV-PDB-1MH4-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "1MH4", "doi": "10.1110/ps.0219103", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MH4" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "maltose binding-a1 homeodomain protein chimera, crystal form II" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltose binding-a1 homeodomain protein chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MH3", "evidence_id": "EV-PDB-1MH3-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "1MH3", "doi": "10.1110/ps.0219103", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MH3" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "maltose binding-a1 homeodomain protein chimera, crystal form I" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "MALTODEXTRIN BINDING PROTEIN (chains 1,2)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1MDP", "evidence_id": "EV-PDB-1MDP-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "1MDP", "doi": "10.1006/jmbi.1994.0059", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1MDP" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "REFINED STRUCTURES OF TWO INSERTION(SLASH)DELETION MUTANTS PROBE FUNCTION OF THE MALTODEXTRIN BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1JW5", "evidence_id": "EV-PDB-1JW5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "1JW5", "doi": "10.1021/bi015784n", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1JW5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of Maltose Bound to Open-form Maltodextrin-binding Protein in P1 Crystal" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1JW4", "evidence_id": "EV-PDB-1JW4-1", "mappings": [ { "confidence": "high", "justification": "Ligand-free open structure; representative for the open apo state.", "rule": "curator_assignment", "state_id": "MBP-open-apo", "who": "curator:draft (unreviewed)" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "1JW4", "doi": "10.1021/bi015784n", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1JW4" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of ligand-free maltodextrin-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": 14.85 }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN MALE-B133 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1IUD", "evidence_id": "EV-PDB-1IUD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "1IUD", "doi": "10.1002/(SICI)1097-0134(199701)27:1<1::AID-PROT2>3.0.CO;2-L", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1IUD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MALTODEXTRIN-BINDING PROTEIN INSERTION/DELETION MUTANT WITH AN INSERTED B-CELL EPITOPE FROM THE PRES2 REGION OF HEPATITIS B VIRUS" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GLC" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "FUSION PROTEIN CONSISTING OF STAPHYLOCOCCUS ACCESSORY REGULATOR PROTEIN R AND MALTOSE BINDING PROTEIN (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1HSJ", "evidence_id": "EV-PDB-1HSJ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "1HSJ", "doi": "10.1073/pnas.121013398", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1HSJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "SARR MBP FUSION STRUCTURE" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-sorbitol" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.6, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1FQB", "evidence_id": "EV-PDB-1FQB-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "1FQB", "doi": "10.1006/jmbi.2001.4456", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1FQB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "STRUCTURE OF MALTOTRIOTOL BOUND TO OPEN-FORM MALTODEXTRIN BINDING PROTEIN IN P2(1)CRYSTAL FORM" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "MALTODEXTRIN BINDING PERIPLASMIC PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1EZP", "evidence_id": "EV-PDB-1EZP-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "1EZP", "doi": "10.1006/jmbi.2000.3842", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1EZP" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "GLOBAL FOLD OF MALTODEXTRIN BINDING PROTEIN COMPLEXED WITH BETA-CYCLODEXTRIN USING PEPTIDE ORIENTATIONS FROM DIPOLAR COUPLINGS" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1EZO", "evidence_id": "EV-PDB-1EZO-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "1EZO", "doi": "10.1006/jmbi.2000.3842", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1EZO" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "GLOBAL FOLD OF MALTODEXTRIN BINDING PROTEIN COMPLEXED WITH BETA-CYCLODEXTRIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-D-glucose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1EZ9", "evidence_id": "EV-PDB-1EZ9-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "1EZ9", "doi": "10.1021/bi015784n", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1EZ9" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "STRUCTURE OF MALTOTETRAITOL BOUND TO OPEN-FORM MALTODEXTRIN BINDING PROTEIN IN P1 CRYSTAL FORM" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: Cycloheptakis-(1-4)-(alpha-D-glucopyranose)" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "D-MALTODEXTRIN BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/1DMB", "evidence_id": "EV-PDB-1DMB-1", "mappings": [ { "confidence": "medium", "justification": "Beta-cyclodextrin binds without closing MBP (as in 1DMB).", "rule": "mbp-cyclodextrin-open", "state_id": "MBP-open-apo", "who": "rule:mbp-cyclodextrin-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "1DMB", "doi": "10.1021/bi00091a004", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/1DMB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "REFINED 1.8 ANGSTROMS STRUCTURE REVEALS THE MECHANISM OF BINDING OF A CYCLIC SUGAR, BETA-CYCLODEXTRIN, TO THE MALTODEXTRIN BINDING PROTEIN" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2N45", "evidence_id": "EV-PDB-2N45-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "2N45", "doi": "10.1038/nmeth.3455", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2N45" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "EC-NMR Structure of Escherichia coli Maltose-binding protein Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data with a second set of RDC data simulated for an alternative alignment tensor. Northeast Structural Genomics Consortium target ER690" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose Binding periplasmic Protein and Monobody MBP-74 Fusion protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2OBG", "evidence_id": "EV-PDB-2OBG-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.35 }, "provenance": { "deposit_id": "2OBG", "doi": "10.1073/pnas.0700149104", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2OBG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Monobody MBP-74/Maltose Binding Protein Fusion Complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ATP", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2R6G", "evidence_id": "EV-PDB-2R6G-2", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "2R6G", "doi": "10.1038/nature06264", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2R6G" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The Crystal Structure of the E. coli Maltose Transporter" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Sugar ABC transporter substrate-binding protein,Mitochondrial antiviral-signaling protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2VGQ", "evidence_id": "EV-PDB-2VGQ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "2VGQ", "doi": "10.1186/1472-6807-8-11", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2VGQ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Human IPS-1 CARD" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -180.15 }, "construct": { "description": "Maltose-binding periplasmic protein, LINKER, Mitochondrial intermembrane space import and assembly protein 40 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2ZXT", "evidence_id": "EV-PDB-2ZXT-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "2ZXT", "doi": "10.1073/pnas.0901793106", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2ZXT" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of Tim40/MIA40, a disulfide relay system in mitochondria, solved as MBP fusion protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ATP", "MG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,TnsA endonuclease N-terminal domain-containing protein,TnsB transposase (chains R,S,T,U,V,W,X,a,b,c,d)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/30GA", "evidence_id": "EV-PDB-30GA-10", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.2 }, "provenance": { "deposit_id": "30GA", "doi": "10.64898/2026.05.18.725949", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/30GA" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the PseCascade-TniQ-TnsC-TnsAB holocomplex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ATP", "MG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,TnsA endonuclease N-terminal domain-containing protein,TnsB transposase (chains R,S,T,U,V,W,X)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/30GB", "evidence_id": "EV-PDB-30GB-9", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "30GB", "doi": "10.64898/2026.05.18.725949", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/30GB" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the PseCascade-TniQ-TnsC complex bound to PseTnsB-hook motifs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -180.15 }, "construct": { "description": "Fusion protein of Maltose-binding periplasmic protein and Parathyroid hormone/parathyroid hormone-related peptide receptor (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3C4M", "evidence_id": "EV-PDB-3C4M-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "3C4M", "doi": "10.1073/pnas.0801027105", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3C4M" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of human parathyroid hormone in complex with the extracellular domain of its G-protein-coupled receptor (PTH1R)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding protein Monobody YS1 Fusion (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3CSG", "evidence_id": "EV-PDB-3CSG-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.798 }, "provenance": { "deposit_id": "3CSG", "doi": "10.1016/j.jmb.2008.06.014", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3CSG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Monobody YS1(MBP-74)/Maltose Binding Protein Fusion Complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CD", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, LINKER, Zona pellucida protein 3 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3D4C", "evidence_id": "EV-PDB-3D4C-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "3D4C", "doi": "10.1038/nature07599", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3D4C" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "ZP-N domain of mammalian sperm receptor ZP3 (crystal form I)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein fused with RACK1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3DM0", "evidence_id": "EV-PDB-3DM0-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "3DM0", "doi": "10.1110/ps.035121.108", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3DM0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Maltose Binding Protein fusion with RACK1 from A. thaliana" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.8, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, LINKER, Zona pellucida protein 3 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3EF7", "evidence_id": "EV-PDB-3EF7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.1 }, "provenance": { "deposit_id": "3EF7", "doi": "10.1038/nature07599", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3EF7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "ZP-N domain of mammalian sperm receptor ZP3 (crystal form III)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.7, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "fusion protein of CRFR1 extracellular domain and MBP (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3EHS", "evidence_id": "EV-PDB-3EHS-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.76 }, "provenance": { "deposit_id": "3EHS", "doi": "10.1074/jbc.M805749200", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3EHS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (CRFR1)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "BTB", "CA", "PEG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.75, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "FUSION PROTEIN OF CRFR1 EXTRACELLULAR DOMAIN AND MBP (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3EHU", "evidence_id": "EV-PDB-3EHU-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.96 }, "provenance": { "deposit_id": "3EHU", "doi": "10.1074/jbc.M805749200", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3EHU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (CRFR1) in complex with CRF" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A3P", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Heparan sulfate 2-O-sulfotransferase 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3F5F", "evidence_id": "EV-PDB-3F5F-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.65 }, "provenance": { "deposit_id": "3F5F", "doi": "10.1073/pnas.0806975105", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3F5F" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of heparan sulfate 2-O-sulfotransferase from gallus gallus as a maltose binding protein fusion." }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Islet amyloid polypeptide fusion protein (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3G7V", "evidence_id": "EV-PDB-3G7V-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.86 }, "provenance": { "deposit_id": "3G7V", "doi": "10.1002/pro.145", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3G7V" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Islet Amyloid Polypeptide (IAPP or Amylin) fused to Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Islet amyloid polypeptide fusion protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3G7W", "evidence_id": "EV-PDB-3G7W-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.75 }, "provenance": { "deposit_id": "3G7W", "doi": "10.1002/pro.145", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3G7W" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Islet Amyloid Polypeptide (IAPP or Amylin) Residues 1 to 22 fused to Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Fusion protein of Maltose-binding periplasmic domain and human parathyroid hormone receptor extracellular domain (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3H3G", "evidence_id": "EV-PDB-3H3G-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.94 }, "provenance": { "deposit_id": "3H3G", "doi": "10.1074/jbc.M109.022905", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3H3G" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the extracellular domain of the human parathyroid hormone receptor (PTH1R) in complex with parathyroid hormone-related protein (PTHrP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "ZN", "branched: beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -160.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3HPI", "evidence_id": "EV-PDB-3HPI-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "3HPI", "doi": "10.1074/jbc.M109.089078", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3HPI" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of maltose-binding protein mutant with bound sucrose" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "TAR", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -160.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3HST", "evidence_id": "EV-PDB-3HST-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.25 }, "provenance": { "deposit_id": "3HST", "doi": "10.1128/JB.01615-09", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3HST" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "N-Terminal RNASE H domain of rv2228c from mycobacterium tuberculosis as a fusion protein with maltose binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein, HUNTINGTIN FUSION PROTEIN (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3IO6", "evidence_id": "EV-PDB-3IO6-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.7 }, "provenance": { "deposit_id": "3IO6", "doi": "10.1016/j.str.2009.08.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3IO6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Huntingtin amino-terminal region with 17 Gln residues - crystal C92-a" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Huntingtin (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3IOU", "evidence_id": "EV-PDB-3IOU-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.7 }, "provenance": { "deposit_id": "3IOU", "doi": "10.1016/j.str.2009.08.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3IOU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Huntingtin amino-terminal region with 17 Gln residues - crystal C94" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Huntingtin (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3IOV", "evidence_id": "EV-PDB-3IOV-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.7 }, "provenance": { "deposit_id": "3IOV", "doi": "10.1016/j.str.2009.08.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3IOV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Huntingtin amino-terminal region with 17 Gln residues - crystal C99" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Huntingtin (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3IOW", "evidence_id": "EV-PDB-3IOW-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.5 }, "provenance": { "deposit_id": "3IOW", "doi": "10.1016/j.str.2009.08.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3IOW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Huntingtin amino-terminal region with 17 Gln residues - crystal C99-Hg" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein, Transient receptor potential cation channel subfamily A member 1 chimera (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3J9P", "evidence_id": "EV-PDB-3J9P-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.24 }, "provenance": { "deposit_id": "3J9P", "doi": "10.1038/nature14367", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3J9P" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the TRPA1 ion channel determined by electron cryo-microscopy" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -160.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3KJT", "evidence_id": "EV-PDB-3KJT-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.5 }, "provenance": { "deposit_id": "3KJT", "doi": "10.1074/jbc.M109.089078", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3KJT" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Stimulation of the maltose transporter by a mutant sucrose binding protein gives insights into ABC transporter coupling" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Renin receptor (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3LBS", "evidence_id": "EV-PDB-3LBS-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.15 }, "provenance": { "deposit_id": "3LBS", "doi": "10.1016/j.bbrc.2011.03.074", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3LBS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-bound form)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "MG", "PG4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Renin receptor (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3LC8", "evidence_id": "EV-PDB-3LC8-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "3LC8", "doi": "10.1016/j.bbrc.2011.03.074", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3LC8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-free form)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3MP6", "evidence_id": "EV-PDB-3MP6-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.48 }, "provenance": { "deposit_id": "3MP6", "doi": "10.1038/emboj.2011.193", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3MP6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Complex Structure of Sgf29 and dimethylated H3K4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "4BZ", "ACY", "GOL", "NA", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3MP8", "evidence_id": "EV-PDB-3MP8-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.92 }, "provenance": { "deposit_id": "3MP8", "doi": "10.1038/emboj.2011.193", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3MP8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of Sgf29 tudor domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "Bone marrow stromal antigen 2 fused to Maltose-binding periplasmic protein (chains A,B,C,D,E,F,G,H)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3MQ9", "evidence_id": "EV-PDB-3MQ9-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "3MQ9", "doi": "10.1073/pnas.1011485107", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3MQ9" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Ectodomain Mutant of BST-2/Tetherin/CD317 Fused to MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose binding protein-CRFR2 alpha (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3N93", "evidence_id": "EV-PDB-3N93-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "3N93", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3N93" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human CRFR2 alpha extracellular domain in complex with Urocortin 3" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Fusion protein of Maltose-binding periplasmic protein and pituitary adenylate cyclase 1 Receptor-short (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3N94", "evidence_id": "EV-PDB-3N94-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "3N94", "doi": "10.1371/journal.pone.0019682", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3N94" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human pituitary adenylate cyclase 1 Receptor-short N-terminal extracellular domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose binding protein-CRFR2 alpha extracellular domain (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3N95", "evidence_id": "EV-PDB-3N95-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.72 }, "provenance": { "deposit_id": "3N95", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3N95" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human CRFR2 alpha extracellular domain in complex with Urocortin 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose binding protein-CRFR2 alpha (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3N96", "evidence_id": "EV-PDB-3N96-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.75 }, "provenance": { "deposit_id": "3N96", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3N96" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human CRFR2 alpha extracellular domain in complex with Urocortin 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Advanced glycosylation end product-specific receptor (chains N)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3O3U", "evidence_id": "EV-PDB-3O3U-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.497 }, "provenance": { "deposit_id": "3O3U", "doi": "10.1074/jbc.M110.169276", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3O3U" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Human Receptor for Advanced Glycation Endproducts (RAGE)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 11.1, "salt_mM": null, "temperature_c": -100.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Myelin protein P0 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3OAI", "evidence_id": "EV-PDB-3OAI-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "3OAI", "doi": "10.1002/prot.23164", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3OAI" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the extra-cellular domain of human myelin protein zero" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose ABC transporter periplasmic protein,Arah 2 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3OB4", "evidence_id": "EV-PDB-3OB4-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.706 }, "provenance": { "deposit_id": "3OB4", "doi": "10.1111/j.1398-9995.2010.02532.x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3OB4" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-fusion protein of the major peanut allergen Ara h 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3MP1", "evidence_id": "EV-PDB-3MP1-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "3MP1", "doi": "10.1038/emboj.2011.193", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3MP1" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Complex structure of Sgf29 and trimethylated H3K4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": 13.85 }, "construct": { "description": "MALTODEXTRIN-BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3MBP", "evidence_id": "EV-PDB-3MBP-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.7 }, "provenance": { "deposit_id": "3MBP", "doi": "10.1016/S0969-2126(97)00253-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3MBP" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MALTODEXTRIN-BINDING PROTEIN WITH BOUND MALTOTRIOSE" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Fusion protein of Maltose-binding periplasmic protein and Parathyroid hormone/parathyroid hormone-related peptide receptor (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3L2J", "evidence_id": "EV-PDB-3L2J-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.24 }, "provenance": { "deposit_id": "3L2J", "doi": "10.1074/jbc.M109.093138", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3L2J" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Dimeric structure of the ligand-free extracellular domain of the human parathyroid hormone receptor (PTH1R)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Huntingtin (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3IOT", "evidence_id": "EV-PDB-3IOT-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.5 }, "provenance": { "deposit_id": "3IOT", "doi": "10.1016/j.str.2009.08.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3IOT" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Huntingtin amino-terminal region with 17 Gln residues - crystal C92-b" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding protein, huntingtin fusion protein (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3IOR", "evidence_id": "EV-PDB-3IOR-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.6 }, "provenance": { "deposit_id": "3IOR", "doi": "10.1016/j.str.2009.08.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3IOR" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Huntingtin amino-terminal region with 17 Gln residues - crystal C95" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein fused with Allergen DERP7 (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3H4Z", "evidence_id": "EV-PDB-3H4Z-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.35 }, "provenance": { "deposit_id": "3H4Z", "doi": "10.1016/j.jaci.2009.12.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3H4Z" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of an MBP-Der p 7 fusion protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.25, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "FUSION PROTEIN OF CRFR1 EXTRACELLULAR DOMAIN AND MBP (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3EHT", "evidence_id": "EV-PDB-3EHT-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.4 }, "provenance": { "deposit_id": "3EHT", "doi": "10.1074/jbc.M805749200", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3EHT" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (CRFR1) in complex with CRF" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, LINKER, Zona pellucida protein 3 (chains A,B,C,D,E,F,G,H)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3D4G", "evidence_id": "EV-PDB-3D4G-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "3D4G", "doi": "10.1038/nature07599", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3D4G" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "ZP-N domain of mammalian sperm receptor ZP3 (crystal form II)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "1PE", "EDO", "MN", "PEG", "PG4", "PGE" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding protein Monobody YSX1 Fusion (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3CSB", "evidence_id": "EV-PDB-3CSB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.999 }, "provenance": { "deposit_id": "3CSB", "doi": "10.1016/j.jmb.2008.06.014", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3CSB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Monobody YSX1/Maltose Binding Protein Fusion Complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, LINKER, Mitochondrial intermembrane space import and assembly protein 40 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3A3C", "evidence_id": "EV-PDB-3A3C-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "3A3C", "doi": "10.1073/pnas.0901793106", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3A3C" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of TIM40/MIA40 fusing MBP, C296S and C298S mutant" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MXT" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.4, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2V93", "evidence_id": "EV-PDB-2V93-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "2V93", "doi": "10.1038/NATURE06232", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2V93" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "EQUILLIBRIUM MIXTURE OF OPEN AND PARTIALLY-CLOSED SPECIES IN THE APO STATE OF MALTODEXTRIN-BINDING PROTEIN BY PARAMAGNETIC RELAXATION ENHANCEMENT NMR" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ATP", "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera (chains B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/2NVU", "evidence_id": "EV-PDB-2NVU-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "2NVU", "doi": "10.1038/nature05490", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/2NVU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of APPBP1-UBA3~NEDD8-NEDD8-MgATP-Ubc12(C111A), a trapped ubiquitin-like protein activation complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Green fluorescent protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3OSQ", "evidence_id": "EV-PDB-3OSQ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "3OSQ", "doi": "10.1002/prot.23118", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3OSQ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Maltose-bound maltose sensor engineered by insertion of circularly permuted green fluorescent protein into E. coli maltose binding protein at position 175" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Green fluorescent protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3OSR", "evidence_id": "EV-PDB-3OSR-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "3OSR", "doi": "10.1002/prot.23118", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3OSR" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Maltose-bound maltose sensor engineered by insertion of circularly permuted green fluorescent protein into E. coli maltose binding protein at position 311" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "IMD", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PGF", "evidence_id": "EV-PDB-3PGF-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "3PGF", "doi": "10.1038/nsmb.2002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PGF" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of maltose bound MBP with a conformationally specific synthetic antigen binder (sAB)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "MG", "PGV", "UMQ", "VO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PUV", "evidence_id": "EV-PDB-3PUV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "3PUV", "doi": "10.1073/pnas.1108858108", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PUV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of an outward-facing MBP-Maltose transporter complex bound to ADP-VO4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "ALF", "MG", "PGV", "UMQ", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PUW", "evidence_id": "EV-PDB-3PUW-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "3PUW", "doi": "10.1073/pnas.1108858108", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PUW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of an outward-facing MBP-Maltose transporter complex bound to ADP-AlF4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "BEF", "MG", "PGV", "UMQ", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PUX", "evidence_id": "EV-PDB-3PUX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "3PUX", "doi": "10.1073/pnas.1108858108", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PUX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of an outward-facing MBP-Maltose transporter complex bound to ADP-BeF3" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ANP", "MG", "PGV", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose transporter subunit; periplasmic-binding component of ABC superfamily (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PUY", "evidence_id": "EV-PDB-3PUY-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.1 }, "provenance": { "deposit_id": "3PUY", "doi": "10.1126/science.1200767", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PUY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of an outward-facing MBP-Maltose transporter complex bound to AMP-PNP after crystal soaking of the pretranslocation state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ANP", "MG", "PGV", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose transporter subunit; periplasmic-binding component of ABC superfamily (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PUZ", "evidence_id": "EV-PDB-3PUZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "3PUZ", "doi": "10.1126/science.1200767", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PUZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of a pre-translocation state MBP-Maltose transporter complex bound to AMP-PNP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltose-binding periplasmic protein,paxillin LD1,protein E6 chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PY7", "evidence_id": "EV-PDB-3PY7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.288 }, "provenance": { "deposit_id": "3PY7", "doi": "10.1126/science.1229934", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PY7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of full-length Bovine Papillomavirus oncoprotein E6 in complex with LD1 motif of paxillin at 2.3A resolution" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein/alpha-synuclein chimeric protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3Q25", "evidence_id": "EV-PDB-3Q25-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "3Q25", "doi": "10.1002/pro.630", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3Q25" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human alpha-synuclein (1-19) fused to maltose binding protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein/alpha-synuclein chimeric protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3Q26", "evidence_id": "EV-PDB-3Q26-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.54 }, "provenance": { "deposit_id": "3Q26", "doi": "10.1002/pro.630", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3Q26" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Cyrstal structure of human alpha-synuclein (10-42) fused to maltose binding protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein/alpha-synuclein chimeric protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3Q27", "evidence_id": "EV-PDB-3Q27-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.302 }, "provenance": { "deposit_id": "3Q27", "doi": "10.1002/pro.630", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3Q27" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Cyrstal structure of human alpha-synuclein (32-57) fused to maltose binding protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein/alpha-synuclein chimeric protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3Q28", "evidence_id": "EV-PDB-3Q28-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.6 }, "provenance": { "deposit_id": "3Q28", "doi": "10.1002/pro.630", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3Q28" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Cyrstal structure of human alpha-synuclein (58-79) fused to maltose binding protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ANP", "MG", "PGV", "UMQ", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3RLF", "evidence_id": "EV-PDB-3RLF-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "3RLF", "doi": "10.1073/pnas.1108858108", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3RLF" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to MgAMPPNP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "IPA", "MAN", "RST", "SO4", "branched: alpha-D-arabinofuranose-(1-2)-alpha-D-mannopyranose-(1-2)-[alpha-L-rhamnopyranose-(1-6)]beta-D-glucopyranose", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3RUM", "evidence_id": "EV-PDB-3RUM-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.851 }, "provenance": { "deposit_id": "3RUM", "doi": "10.1021/ja208755j", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3RUM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "New strategy to analyze structures of glycopeptide antibiotic-target complexes" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C,E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SEV", "evidence_id": "EV-PDB-3SEV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.05 }, "provenance": { "deposit_id": "3SEV", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SEV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Zn-mediated Trimer of Maltose-binding Protein E310H/K314H by Synthetic Symmetrization" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "IOD", "NI", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SEX", "evidence_id": "EV-PDB-3SEX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "3SEX", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SEX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Ni-mediated Dimer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form II)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "GOL", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C,E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SEY", "evidence_id": "EV-PDB-3SEY-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.85 }, "provenance": { "deposit_id": "3SEY", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SEY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form II)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "CAC", "GCS", "MAN", "NAG", "T55", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -180.15 }, "construct": { "description": "Maltose-binding periplasmic protein, C-terminal fused by Cys-Lys-D-Ala-D-Ala (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3VFJ", "evidence_id": "EV-PDB-3VFJ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.05 }, "provenance": { "deposit_id": "3VFJ", "doi": "10.1107/S0907444912050469", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3VFJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The structure of monodechloro-teicoplanin in complex with its ligand, using MBP as a ligand carrier" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "NO3" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.7, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "3-ketoacyl-CoA thiolase, peroxisomal, Maltose-binding periplasmic protein (chains C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3W15", "evidence_id": "EV-PDB-3W15-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "3W15", "doi": "10.1038/nsmb.2618", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3W15" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of peroxisomal targeting signal 2 (PTS2) of Saccharomyces cerevisiae 3-ketoacyl-CoA thiolase in complex with Pex7p and Pex21p" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.4, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Transmembrane oligosaccharyl transferase (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3WAI", "evidence_id": "EV-PDB-3WAI-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.897 }, "provenance": { "deposit_id": "3WAI", "doi": "10.1186/1472-6807-13-11", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3WAI" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (AfAglB-L, O29867_ARCFU) from Archaeoglobus fulgidus as a MBP fusion" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MES", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN, TRIPARTITE MOTIF-CONTAINING PROTEIN 5 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4B3N", "evidence_id": "EV-PDB-4B3N-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.3 }, "provenance": { "deposit_id": "4B3N", "doi": "10.1073/PNAS.1210903109", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4B3N" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of rhesus TRIM5alpha PRY/SPRY domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN, SUPPRESSOR OF FUSED HOMOLOG (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4BL8", "evidence_id": "EV-PDB-4BL8-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.04 }, "provenance": { "deposit_id": "4BL8", "doi": "10.1107/S0907444913028473", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4BL8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of full-length human Suppressor of fused (SUFU)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN, SUPPRESSOR OF FUSED HOMOLOG (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4BL9", "evidence_id": "EV-PDB-4BL9-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "4BL9", "doi": "10.1107/S0907444913028473", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4BL9" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of full-length human Suppressor of fused (SUFU) mutant lacking a regulatory subdomain (crystal form I)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN, SUPPRESSOR OF FUSED HOMOLOG (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4BLA", "evidence_id": "EV-PDB-4BLA-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.5 }, "provenance": { "deposit_id": "4BLA", "doi": "10.1107/S0907444913028473", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4BLA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of full-length human Suppressor of fused (SUFU) mutant lacking a regulatory subdomain (crystal form II)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN, SUPPRESSOR OF FUSED HOMOLOG (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4BLB", "evidence_id": "EV-PDB-4BLB-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "4BLB", "doi": "10.1107/S0907444913028473", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4BLB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a human Suppressor of fused (SUFU)-GLI1p complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Beta-lactamase TEM chimera (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4DXB", "evidence_id": "EV-PDB-4DXB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.29 }, "provenance": { "deposit_id": "4DXB", "doi": "10.1371/journal.pone.0039168", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4DXB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "2.29A structure of the engineered MBP TEM-1 fusion protein RG13 in complex with zinc, P1 space group" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Beta-lactamase TEM chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4DXC", "evidence_id": "EV-PDB-4DXC-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "4DXC", "doi": "10.1371/journal.pone.0039168", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4DXC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the engineered MBP TEM-1 fusion protein RG13, C2 space group" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Myosin-binding protein C, cardiac-type chimeric protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4EDQ", "evidence_id": "EV-PDB-4EDQ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.641 }, "provenance": { "deposit_id": "4EDQ", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4EDQ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-fusion protein of myosin-binding protein c residues 149-269" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.1, "salt_mM": null, "temperature_c": -188.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Homeobox protein SIX1 chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4EGC", "evidence_id": "EV-PDB-4EGC-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.994 }, "provenance": { "deposit_id": "4EGC", "doi": "10.1038/nsmb.2505", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4EGC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of MBP-fused Human Six1 Bound to Human Eya2 Eya Domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PGE", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, uncharacterized protein chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4EXK", "evidence_id": "EV-PDB-4EXK-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.28 }, "provenance": { "deposit_id": "4EXK", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4EXK" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "A chimera protein containing MBP fused to the C-terminal domain of the uncharacterized protein STM14_2015 from Salmonella enterica" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Huntingtin (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4FE8", "evidence_id": "EV-PDB-4FE8-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "4FE8", "doi": "10.4161/pri.23807", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4FE8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Htt36Q3H-EX1-X1-C1(Alpha)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Huntingtin (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4FEC", "evidence_id": "EV-PDB-4FEC-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "4FEC", "doi": "10.4161/pri.23807", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4FEC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Htt36Q3H" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4GIZ", "evidence_id": "EV-PDB-4GIZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.55 }, "provenance": { "deposit_id": "4GIZ", "doi": "10.1126/science.1229934", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4GIZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -196.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Survival motor neuron protein chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4GLI", "evidence_id": "EV-PDB-4GLI-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.903 }, "provenance": { "deposit_id": "4GLI", "doi": "10.1016/j.str.2012.08.024", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4GLI" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Human SMN YG-Dimer" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MLI", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.4, "salt_mM": null, "temperature_c": 24.85 }, "construct": { "description": "Maltose-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 1 (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4IFP", "evidence_id": "EV-PDB-4IFP-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9948 }, "provenance": { "deposit_id": "4IFP", "doi": "10.1002/prot.24287", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4IFP" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "X-ray Crystal Structure of Human NLRP1 CARD Domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "EDO", "MLI", "NA", "PEG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein, Novel protein similar to vertebrate guanylate binding protein family (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4IRL", "evidence_id": "EV-PDB-4IRL-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.47 }, "provenance": { "deposit_id": "4IRL", "doi": "10.1107/S1744309113015558", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4IRL" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "X-ray structure of the CARD domain of zebrafish GBP-NLRP1 like protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.8, "salt_mM": null, "temperature_c": -80.0 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN FUSED WITH XENOPUS LAEVIS MCM10 COILED-COIL REGION (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4JBZ", "evidence_id": "EV-PDB-4JBZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "4JBZ", "doi": "10.1371/journal.pone.0070518", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4JBZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of Mcm10 coiled-coil region" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "IOD", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.2, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein, Caspase recruitment domain-containing protein 8 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4IKM", "evidence_id": "EV-PDB-4IKM-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4606 }, "provenance": { "deposit_id": "4IKM", "doi": "10.1107/S1744309113010075", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4IKM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "X-ray structure of CARD8 CARD domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "EDO", "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose binding protein-CaKar3 motor domain fusion protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4H1G", "evidence_id": "EV-PDB-4H1G-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.15 }, "provenance": { "deposit_id": "4H1G", "doi": "10.1016/j.bbrc.2012.10.101", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4H1G" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of Candida albicans Kar3 motor domain fused to maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Huntingtin (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4FED", "evidence_id": "EV-PDB-4FED-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.807 }, "provenance": { "deposit_id": "4FED", "doi": "10.4161/pri.23807", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4FED" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Htt36Q3H" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN, SUPPRESSOR OF FUSED HOMOLOG (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4BLD", "evidence_id": "EV-PDB-4BLD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.802 }, "provenance": { "deposit_id": "4BLD", "doi": "10.1107/S0907444913028473", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4BLD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a human Suppressor of fused (SUFU)-GLI3p complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Repressor protein CI, Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3WOA", "evidence_id": "EV-PDB-3WOA-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "3WOA", "doi": "10.1002/2211-5463.12480", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3WOA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of lambda repressor (1-45) fused with maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "GOL", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SEW", "evidence_id": "EV-PDB-3SEW-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.55 }, "provenance": { "deposit_id": "3SEW", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SEW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form I)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "GOL", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SEU", "evidence_id": "EV-PDB-3SEU-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.85 }, "provenance": { "deposit_id": "3SEU", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SEU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form III)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NI", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SET", "evidence_id": "EV-PDB-3SET-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "3SET", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SET" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Ni-mediated Dimer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form I)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "CU", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SES", "evidence_id": "EV-PDB-3SES-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "3SES", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SES" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Cu-mediated Dimer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "CL", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3SER", "evidence_id": "EV-PDB-3SER-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.35 }, "provenance": { "deposit_id": "3SER", "doi": "10.1002/pro.727", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3SER" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Zn-mediated Polymer of Maltose-binding Protein K26H/K30H by Synthetic Symmetrization" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein/alpha-synuclein chimeric protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3Q29", "evidence_id": "EV-PDB-3Q29-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "3Q29", "doi": "10.1002/pro.630", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3Q29" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Cyrstal structure of human alpha-synuclein (1-19) fused to maltose binding protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PGV", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose transporter subunit; periplasmic-binding component of ABC superfamily (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/3PV0", "evidence_id": "EV-PDB-3PV0-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.1 }, "provenance": { "deposit_id": "3PV0", "doi": "10.1126/science.1200767", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/3PV0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of a pre-translocation state MBP-Maltose transporter complex without nucleotide" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "BOG", "MG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "Maltose-binding periplasmic/Palate lung and nasal epithelium clone fusion protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4KEG", "evidence_id": "EV-PDB-4KEG-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "4KEG", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4KEG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of MBP Fused Human SPLUNC1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "FMT", "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP-MCL1 chimera protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WMS", "evidence_id": "EV-PDB-4WMS-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "4WMS", "doi": "10.1371/journal.pone.0125010", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WMS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "STRUCTURE OF APO MBP-MCL1 AT 1.9A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "865", "EDO", "FMT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP-MCL1 chimera protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WMT", "evidence_id": "EV-PDB-4WMT-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.35 }, "provenance": { "deposit_id": "4WMT", "doi": "10.1371/journal.pone.0125010", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WMT" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "STRUCTURE OF MBP-MCL1 BOUND TO ligand 1 AT 2.35A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "PEG", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, ubiquitin ligase E6AP (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4XR8", "evidence_id": "EV-PDB-4XR8-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.25 }, "provenance": { "deposit_id": "4XR8", "doi": "10.1038/nature16481", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4XR8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the HPV16 E6/E6AP/p53 ternary complex at 2.25 A resolution" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "GOL" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.4, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose binding protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5BK1", "evidence_id": "EV-PDB-5BK1-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.15 }, "provenance": { "deposit_id": "5BK1", "doi": "10.1074/jbc.RA117.000656", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5BK1" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of maltose binding protein in complex with an endosteric synthetic antibody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "EPE", "GOL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5BJZ", "evidence_id": "EV-PDB-5BJZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "5BJZ", "doi": "10.1074/jbc.RA117.000656", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5BJZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of maltose binding protein in complex with an allosteric synthetic antibody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5B3Z", "evidence_id": "EV-PDB-5B3Z-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "5B3Z", "doi": "10.1038/srep34654", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5B3Z" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of hPin1 WW domain (5-39) fused with maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5B3Y", "evidence_id": "EV-PDB-5B3Y-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.901 }, "provenance": { "deposit_id": "5B3Y", "doi": "10.1038/srep34654", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5B3Y" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of hPin1 WW domain (5-23) fused with maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5B3X", "evidence_id": "EV-PDB-5B3X-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "5B3X", "doi": "10.1038/srep34654", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5B3X" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in P41212 form" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CIT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5B3W", "evidence_id": "EV-PDB-5B3W-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "5B3W", "doi": "10.1038/srep34654", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5B3W" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of hPin1 WW domain (5-15) fused with maltose-binding protein in C2221 form" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Oligosaccharyl transferase stt3 subunit related protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5AZA", "evidence_id": "EV-PDB-5AZA-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.08 }, "provenance": { "deposit_id": "5AZA", "doi": "10.1002/pro.2867", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5AZA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-sAglB fusion protein with a 20-residue spacer in the connector helix" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Mitochondrial import receptor subunit TOM20 homolog (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5AZ9", "evidence_id": "EV-PDB-5AZ9-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.82 }, "provenance": { "deposit_id": "5AZ9", "doi": "10.1002/pro.2867", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5AZ9" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of (5-residue deleted)MBP-Tom20 fusion protein tethered with ALDH presequence via a disulfide bond" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "AAC", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Mitochondrial import receptor subunit TOM20 homolog (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5AZ8", "evidence_id": "EV-PDB-5AZ8-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.7 }, "provenance": { "deposit_id": "5AZ8", "doi": "10.1002/pro.2867", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5AZ8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-Tom20 fusion protein tethered with ALDH presequence via a disulfide bond" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.4, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Mitochondrial import receptor subunit TOM20 homolog (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5AZ7", "evidence_id": "EV-PDB-5AZ7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.96 }, "provenance": { "deposit_id": "5AZ7", "doi": "10.1002/pro.2867", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5AZ7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-Tom20 fusion protein with a 4-residue spacer in the connector helix" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.3, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Mitochondrial import receptor subunit TOM20 homolog (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5AZ6", "evidence_id": "EV-PDB-5AZ6-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.56 }, "provenance": { "deposit_id": "5AZ6", "doi": "10.1002/pro.2867", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5AZ6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-Tom20 fusion protein with a 2-residue spacer in the connector helix" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.1, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN (chains B,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5AQ9", "evidence_id": "EV-PDB-5AQ9-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.86 }, "provenance": { "deposit_id": "5AQ9", "doi": "10.1016/J.JMB.2016.03.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5AQ9" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "DARPin-based Crystallization Chaperones exploit Molecular Geometry as a Screening Dimension in Protein Crystallography" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,TP53-regulated inhibitor of apoptosis 1 (chains A,C,E,G)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4XZV", "evidence_id": "EV-PDB-4XZV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.58 }, "provenance": { "deposit_id": "4XZV", "doi": "10.15252/embr.201540229", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4XZV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of SLMO1-TRIAP1 Complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,TP53-regulated inhibitor of apoptosis 1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4XZS", "evidence_id": "EV-PDB-4XZS-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.12 }, "provenance": { "deposit_id": "4XZS", "doi": "10.15252/embr.201540229", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4XZS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of TRIAP1-MBP fusion" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,MBP-PilA: c (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4XA2", "evidence_id": "EV-PDB-4XA2-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.98 }, "provenance": { "deposit_id": "4XA2", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4XA2" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of the Major Type IV pilin of Acinetobacter baumannii" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Ataxin-3 chimera (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WTH", "evidence_id": "EV-PDB-4WTH-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.25 }, "provenance": { "deposit_id": "4WTH", "doi": "10.1002/2211-5463.12029", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WTH" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Ataxin-3 Carboxy Terminal Region - Crystal C2 (triclinic)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "3R7", "FMT", "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP-MCL1 chimera protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WMX", "evidence_id": "EV-PDB-4WMX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "4WMX", "doi": "10.1371/journal.pone.0125010", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WMX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The structure of MBP-MCL1 bound to ligand 6 at 2.0A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "3R6", "EDO", "FMT", "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP-MCL1 chimera protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WMW", "evidence_id": "EV-PDB-4WMW-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "4WMW", "doi": "10.1371/journal.pone.0125010", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WMW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The structure of MBP-MCL1 bound to ligand 5 at 1.9A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "3R4", "CL", "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBL-MCL1 chimera protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WMV", "evidence_id": "EV-PDB-4WMV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "4WMV", "doi": "10.1371/journal.pone.0125010", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WMV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "STRUCTURE OF MBP-MCL1 BOUND TO ligand 4 AT 2.4A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "19H", "EDO", "FMT", "MG", "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP-MCL1 chimera protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WMU", "evidence_id": "EV-PDB-4WMU-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.55 }, "provenance": { "deposit_id": "4WMU", "doi": "10.1371/journal.pone.0125010", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WMU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "STRUCTURE OF MBP-MCL1 BOUND TO ligand 2 AT 1.55A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E,F,G,H)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4WJV", "evidence_id": "EV-PDB-4WJV-2", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.2 }, "provenance": { "deposit_id": "4WJV", "doi": "10.1083/jcb.201408111", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4WJV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of Rsa4 in complex with the Nsa2 binding peptide" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "TMO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -174.05 }, "construct": { "description": "maltose-binding protein, pilin chimera (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4TSM", "evidence_id": "EV-PDB-4TSM-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.899 }, "provenance": { "deposit_id": "4TSM", "doi": "10.1016/j.str.2014.11.018", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4TSM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-fusion protein of PilA1 from C. difficile R20291 residues 26-166" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -168.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Receptor activity-modifying protein 1, Calcitonin gene-related peptide type 1 receptor fusion protein (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4RWG", "evidence_id": "EV-PDB-4RWG-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.44 }, "provenance": { "deposit_id": "4RWG", "doi": "10.1016/j.molcel.2015.04.018", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4RWG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the CLR:RAMP1 extracellular domain heterodimer with bound high affinity CGRP analog" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.3, "salt_mM": null, "temperature_c": -168.15 }, "construct": { "description": "Maltose transporter subunit, Receptor activity-modifying protein 2, Calcitonin gene-related peptide type 1 receptor fusion protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4RWF", "evidence_id": "EV-PDB-4RWF-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.76 }, "provenance": { "deposit_id": "4RWF", "doi": "10.1016/j.molcel.2015.04.018", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4RWF" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the CLR:RAMP2 extracellular domain heterodimer with bound adrenomedullin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MLI", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -196.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Survival Motor Neuron protein chimera (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4RG5", "evidence_id": "EV-PDB-4RG5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.7 }, "provenance": { "deposit_id": "4RG5", "doi": "10.1074/jbc.M115.667279", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4RG5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of S. Pombe SMN YG-Dimer" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Disks large-associated protein 1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4R0Y", "evidence_id": "EV-PDB-4R0Y-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "4R0Y", "doi": "10.1016/j.bbrc.2014.08.073", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4R0Y" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of Maltose-binding Protein Fusion with the C-terminal GH1 domain of Guanylate Kinase-associated Protein from Rattus norvegicus" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "COA", "FLC", "GOL", "MG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -196.15 }, "construct": { "description": "Maltose-binding periplasmic protein, 4'-phosphopantetheinyl transferase chimera (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4QVH", "evidence_id": "EV-PDB-4QVH-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.75 }, "provenance": { "deposit_id": "4QVH", "doi": "10.1016/j.jsb.2014.10.004", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4QVH" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the essential Mycobacterium tuberculosis phosphopantetheinyl transferase PptT, solved as a fusion protein with maltose binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "FLC", "GLC" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, JmjC domain-containing protein 7 chimera (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4QSZ", "evidence_id": "EV-PDB-4QSZ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.86 }, "provenance": { "deposit_id": "4QSZ", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4QSZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of mouse JMJd7 fused with maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose ABC transporter periplasmic protein, Truncated replication protein RepA (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4PQK", "evidence_id": "EV-PDB-4PQK-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.401 }, "provenance": { "deposit_id": "4PQK", "doi": "10.1073/pnas.1406065111", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4PQK" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "C-Terminal domain of DNA binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MLI", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose ABC transporter periplasmic protein,Prepilin-type N-terminal cleavage/methylation domain protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4PE2", "evidence_id": "EV-PDB-4PE2-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.724 }, "provenance": { "deposit_id": "4PE2", "doi": "10.1016/j.str.2014.11.018", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4PE2" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP PilA1 CD160" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "EDO" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -180.15 }, "construct": { "description": "Chimera of Maltose-binding periplasmic protein and Kinesin family member 14 protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4OZQ", "evidence_id": "EV-PDB-4OZQ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.71 }, "provenance": { "deposit_id": "4OZQ", "doi": "10.1016/j.jmb.2014.05.030", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4OZQ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the mouse Kif14 motor domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": 24.85 }, "construct": { "description": "Maltose ABC transporter periplasmic protein, pilin protein chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4OGM", "evidence_id": "EV-PDB-4OGM-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.234 }, "provenance": { "deposit_id": "4OGM", "doi": "10.1016/j.str.2014.11.018", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4OGM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-fusion protein of PilA1 residues 26-159" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Extracellular solute-binding protein family 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4O4B", "evidence_id": "EV-PDB-4O4B-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "4O4B", "doi": "10.1038/ncomms5178", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4O4B" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of an Inositol hexakisphosphate kinase EhIP6KA as a fusion protein with maltose binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "Maltose-binding periplasmic protein, ATP-dependent Clp protease adaptor protein ClpS containing protein chimeric construct (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4O2X", "evidence_id": "EV-PDB-4O2X-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "4O2X", "doi": "10.1002/pro.2868", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4O2X" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of a malarial protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose ABC transporter periplasmic protein, Nuclear receptor subfamily 0 group B member 2 chimeric construct (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4NUF", "evidence_id": "EV-PDB-4NUF-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "4NUF", "doi": "10.1073/pnas.1322827111", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4NUF" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of SHP/EID1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A3P", "NPO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose", "branched: beta-D-glucopyranuronic acid-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Heparan sulfate 2-O-sulfotransferase 1 fusion (chains A,B,C,D,E,F)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4NDZ", "evidence_id": "EV-PDB-4NDZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.45 }, "provenance": { "deposit_id": "4NDZ", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4NDZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of Maltose Binding Protein fusion to 2-O-Sulfotransferase with bound heptasaccharide and PAP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "PEG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "Maltose-binding periplasmic/Palate lung and nasal epithelium clone fusion protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4N4X", "evidence_id": "EV-PDB-4N4X-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.501 }, "provenance": { "deposit_id": "4N4X", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4N4X" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of the MBP fused human SPLUNC1 (native form)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": 13.85 }, "construct": { "description": "MALTODEXTRIN BINDING PROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4MBP", "evidence_id": "EV-PDB-4MBP-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.7 }, "provenance": { "deposit_id": "4MBP", "doi": "10.1016/S0969-2126(97)00253-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4MBP" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MALTODEXTRIN BINDING PROTEIN WITH BOUND MALTETROSE" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose ABC transporter periplasmic protein and NR2E3 protein chimeric construct (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4LOG", "evidence_id": "EV-PDB-4LOG-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "4LOG", "doi": "10.1371/journal.pone.0074359", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4LOG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The crystal structure of the orphan nuclear receptor PNR ligand binding domain fused with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.7, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Phosphoprotein, chimeric construct (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4KYE", "evidence_id": "EV-PDB-4KYE-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "4KYE", "doi": "10.1002/pro.2336", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4KYE" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Partial Structure of the C-terminal domain of the HPIV4B phosphoprotein, fused to MBP." }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MPO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.3, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Phosphoprotein, chimeric construct (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4KYD", "evidence_id": "EV-PDB-4KYD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.21 }, "provenance": { "deposit_id": "4KYD", "doi": "10.1002/pro.2336", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4KYD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Partial Structure of the C-terminal domain of the HPIV4B phosphoprotein, fused to MBP." }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "BO3", "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.1, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Phosphoprotein, chimeric construct (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4KYC", "evidence_id": "EV-PDB-4KYC-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "4KYC", "doi": "10.1002/pro.2336", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4KYC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of the C-terminal domain of the Menangle virus phosphoprotein, fused to MBP." }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Chimera fusion protein of ESX-1 secretion system protein eccD1 and Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4KV3", "evidence_id": "EV-PDB-4KV3-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "4KV3", "doi": "10.1186/s12900-016-0056-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4KV3" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Ubiquitin-like domain of the Mycobacterium tuberculosis type VII secretion system protein EccD1 as maltose-binding protein fusion" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ANP", "MG", "PGV", "UMQ", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4KI0", "evidence_id": "EV-PDB-4KI0-2", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.38 }, "provenance": { "deposit_id": "4KI0", "doi": "10.1073/pnas.1311407110", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4KI0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PGV", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4KHZ", "evidence_id": "EV-PDB-4KHZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "4KHZ", "doi": "10.1073/pnas.1311407110", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4KHZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/4JKM", "evidence_id": "EV-PDB-4JKM-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.263 }, "provenance": { "deposit_id": "4JKM", "doi": "10.1016/j.chembiol.2015.08.005", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/4JKM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Clostridium perfringens beta-glucuronidase" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "GOL", "PO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5BK2", "evidence_id": "EV-PDB-5BK2-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "5BK2", "doi": "10.1074/jbc.RA117.000656", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5BK2" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of maltose binding protein in complex with a peristeric synthetic antibody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "MG", "MPD", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Maltose-binding periplasmic protein,PilA fusion protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5CFV", "evidence_id": "EV-PDB-5CFV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "5CFV", "doi": "10.1074/jbc.M116.751099", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5CFV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Fusion of Maltose-binding Protein and PilA from Acinetobacter nosocomialis M2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Telomerase-associated protein 19 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5DFM", "evidence_id": "EV-PDB-5DFM-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.301 }, "provenance": { "deposit_id": "5DFM", "doi": "10.1126/science.aab4070", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5DFM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of Tetrahymena telomerase p19 fused to MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GTP", "MG", "PRO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Nuclear pore complex protein Nup214 (chains D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5DIS", "evidence_id": "EV-PDB-5DIS-4", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.85 }, "provenance": { "deposit_id": "5DIS", "doi": "10.1016/j.celrep.2015.09.042", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5DIS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a CRM1-RanGTP-SPN1 export complex bound to a 113 amino acid FG-repeat containing fragment of Nup214" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "K", "TSN", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein, Histone deacetylase 6 chimera (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5EDU", "evidence_id": "EV-PDB-5EDU-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.79 }, "provenance": { "deposit_id": "5EDU", "doi": "10.1038/nchembio.2134", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5EDU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human histone deacetylase 6 catalytic domain 2 in complex with trichostatin A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "HG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN (chains B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5FIO", "evidence_id": "EV-PDB-5FIO-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "5FIO", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5FIO" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "DARPins as a new tool for experimental phasing in protein crystallography" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5GRU", "evidence_id": "EV-PDB-5GRU-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.955 }, "provenance": { "deposit_id": "5GRU", "doi": "10.1038/srep34515", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5GRU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of mono-specific diabody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.2, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5GS2", "evidence_id": "EV-PDB-5GS2-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.592 }, "provenance": { "deposit_id": "5GS2", "doi": "10.1038/srep34515", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5GS2" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of diabody complex with repebody and MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,PigG (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5GXV", "evidence_id": "EV-PDB-5GXV-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "5GXV", "doi": "10.1016/j.ijbiomac.2017.02.088", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5GXV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of PigG" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MNDA PYD domain with MBP tag (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5H7Q", "evidence_id": "EV-PDB-5H7Q-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.451 }, "provenance": { "deposit_id": "5H7Q", "doi": "10.1038/srep40991", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5H7Q" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human MNDA PYD domain with MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "BGC", "EDO", "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "ComP (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5HZ7", "evidence_id": "EV-PDB-5HZ7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.43 }, "provenance": { "deposit_id": "5HZ7", "doi": "10.1016/j.str.2016.04.001", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5HZ7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "High-resolution crystal structure of the minor DNA-binding pilin ComP from Neisseria meningitidis in fusion with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Endoglin (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5HZW", "evidence_id": "EV-PDB-5HZW-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.451 }, "provenance": { "deposit_id": "5HZW", "doi": "10.1016/j.celrep.2017.05.011", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5HZW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the orphan region of human endoglin/CD105 in complex with BMP9" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Tightly bound bacterial magnetic particle protein,Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5I69", "evidence_id": "EV-PDB-5I69-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "5I69", "doi": "10.1016/j.jsb.2016.03.001", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5I69" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-MamC magnetite-interaction component mutant-D70A" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "GOL", "MPD", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -166.05 }, "construct": { "description": "Maltose-binding periplasmic protein,Fimbrial protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5IHJ", "evidence_id": "EV-PDB-5IHJ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "5IHJ", "doi": "10.1074/jbc.M116.751099", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5IHJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Fusion of Maltose-binding Protein and PilA from Acinetobacter baumannii BIDMC57" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PGE", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Vitelline envelope sperm lysin receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5II5", "evidence_id": "EV-PDB-5II5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "5II5", "doi": "10.1016/j.cell.2017.05.033", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5II5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of red abalone VERL repeat 1 at 1.8 A resolution" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Vitelline envelope sperm lysin receptor (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5IIC", "evidence_id": "EV-PDB-5IIC-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "5IIC", "doi": "10.1016/j.cell.2017.05.033", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5IIC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of red abalone VERL repeat 3 at 2.9 A resolution" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "SIRT7 protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5IQZ", "evidence_id": "EV-PDB-5IQZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.334 }, "provenance": { "deposit_id": "5IQZ", "doi": "10.1002/prot.25085", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5IQZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of N-terminal domain of Human SIRT7" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "GOL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Mitochondrial division protein 1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5JST", "evidence_id": "EV-PDB-5JST-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.199 }, "provenance": { "deposit_id": "5JST", "doi": "10.1038/srep43318", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5JST" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP fused MDV1 coiled coil" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains B,E,H)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5LEL", "evidence_id": "EV-PDB-5LEL-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.1 }, "provenance": { "deposit_id": "5LEL", "doi": "10.1038/s41598-017-11472-x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5LEL" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of DARPin-DARPin rigid fusion, variant DD_Off7_10_3G124 in complex with Maltose-binding Protein and Green Fluorescent Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 9.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5LEM", "evidence_id": "EV-PDB-5LEM-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.98 }, "provenance": { "deposit_id": "5LEM", "doi": "10.1038/s41598-017-11472-x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5LEM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of DARPin-DARPin rigid fusion, variant DD_Off7_11_3G124 in complex with Maltose-binding Protein and Green Fluorescent Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5M13", "evidence_id": "EV-PDB-5M13-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.372 }, "provenance": { "deposit_id": "5M13", "doi": "10.7554/eLife.34317", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5M13" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Synthetic nanobody in complex with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5M15", "evidence_id": "EV-PDB-5M15-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "5M15", "doi": "10.7554/eLife.34317", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5M15" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Synthetic nanobody in complex with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Sugar ABC transporter substrate-binding protein,Magnetosome protein MamC,Sugar ABC transporter substrate-binding protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5MM3", "evidence_id": "EV-PDB-5MM3-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "5MM3", "doi": "10.1107/S2059798317017491", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5MM3" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Unstructured MamC magnetite-binding protein located between two helices." }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "PGE", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Zona pellucida sperm-binding protein 3 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5OSQ", "evidence_id": "EV-PDB-5OSQ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.05 }, "provenance": { "deposit_id": "5OSQ", "doi": "10.1038/NATURE07599", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5OSQ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "ZP-N domain of mammalian sperm receptor ZP3 (crystal form II, processed in P21221)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A3P", "CL", "EDO", "NA", "NPO", "TLA", "branched: 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltose binding protein - heparan sulfate 6-O-sulfotransferase isoform 3 fusion protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5T03", "evidence_id": "EV-PDB-5T03-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "5T03", "doi": "10.1021/acschembio.6b00841", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5T03" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of heparan sulfate 6-O-sulfotransferase with bound PAP and glucuronic acid containing hexasaccharide substrate" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A3P", "CL", "EDO", "NA", "NPO", "TLA", "branched: 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltose binding protein - heparan sulfate 6-O-sulfotransferase isoform 3 fusion protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5T05", "evidence_id": "EV-PDB-5T05-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.952 }, "provenance": { "deposit_id": "5T05", "doi": "10.1021/acschembio.6b00841", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5T05" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of heparan sulfate 6-O-sulfotransferase with bound PAP and IdoA2S containing hexasaccharide substrate" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -168.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5V6Y", "evidence_id": "EV-PDB-5V6Y-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "5V6Y", "doi": "10.1124/mol.117.110916", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5V6Y" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the human CLR:RAMP1 extracellular domain heterodimer with bound high-affinity and altered selectivity adrenomedullin variant" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "CAC", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP fused activation-induced cytidine deaminase (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5W0R", "evidence_id": "EV-PDB-5W0R-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "5W0R", "doi": "10.1016/j.molcel.2017.06.034", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5W0R" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cacodylic acid" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "DCM", "GOL", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Single-stranded DNA cytosine deaminase (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5W0U", "evidence_id": "EV-PDB-5W0U-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "5W0U", "doi": "10.1016/j.molcel.2017.06.034", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5W0U" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with dCMP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP fused activation-induced cytidine deaminase (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5W0Z", "evidence_id": "EV-PDB-5W0Z-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.61 }, "provenance": { "deposit_id": "5W0Z", "doi": "10.1016/j.molcel.2017.06.034", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5W0Z" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused activation-induced cytidine deaminase (AID)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP-hMNDA-PYD (chains A,B,C,D,E,F)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5WPZ", "evidence_id": "EV-PDB-5WPZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "5WPZ", "doi": "10.1038/srep40991", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5WPZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MNDA PYD with MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Two-component system sensor kinase (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5WVN", "evidence_id": "EV-PDB-5WVN-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "5WVN", "doi": "10.1002/prot.25326", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5WVN" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBS-BaeS fusion protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Two-component system sensor kinase (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5WVM", "evidence_id": "EV-PDB-5WVM-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "5WVM", "doi": "10.1002/prot.25326", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5WVM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of baeS cocrystallized with 2 mM indole" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP tagged hMNDA-PYD (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5WQ6", "evidence_id": "EV-PDB-5WQ6-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.648 }, "provenance": { "deposit_id": "5WQ6", "doi": "10.1038/srep40991", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5WQ6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of hMNDA-PYD with MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "CTN", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP fused activation-induced cytidine deaminase (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5W1C", "evidence_id": "EV-PDB-5W1C-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.18 }, "provenance": { "deposit_id": "5W1C", "doi": "10.1016/j.molcel.2017.06.034", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5W1C" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cytidine" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GLU", "LYS", "MPD", "NA", "SER" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Type IV pilin PilA (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5VAW", "evidence_id": "EV-PDB-5VAW-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.69 }, "provenance": { "deposit_id": "5VAW", "doi": "10.1074/jbc.RA118.005814", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5VAW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Fusion of Maltose-binding Protein and PilA from Acinetobacter baumannii AB5075" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "FMT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Pilin isopeptide linkage domain protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5TTD", "evidence_id": "EV-PDB-5TTD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "5TTD", "doi": "10.1038/srep42753", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5TTD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Minor pilin FctB from S. pyogenes with engineered intramolecular isopeptide bond" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A3P", "CL", "EDO", "NA", "NPO", "TLA", "branched: 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose", "branched: beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "maltose binding protein - heparan sulfate 6-O-sulfotransferase isoform 3 fusion protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5T0A", "evidence_id": "EV-PDB-5T0A-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "5T0A", "doi": "10.1021/acschembio.6b00841", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5T0A" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Heparan Sulfate 6-O-Sulfotransferase with bound PAP and heptasaccharide substrate" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5M14", "evidence_id": "EV-PDB-5M14-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.6 }, "provenance": { "deposit_id": "5M14", "doi": "10.7554/eLife.34317", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5M14" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Synthetic nanobody in complex with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "B3P" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Protein translocase subunit SecA,Maltose-binding periplasmic protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5K94", "evidence_id": "EV-PDB-5K94-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "5K94", "doi": "10.1002/1873-3468.12832", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5K94" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Deletion-Insertion Chimera of MBP with the Preprotein Cross-Linking Domain of the SecA ATPase" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "Sugar ABC transporter substrate-binding protein,Caspase-8 chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5JQE", "evidence_id": "EV-PDB-5JQE-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.157 }, "provenance": { "deposit_id": "5JQE", "doi": "10.1016/j.molcel.2016.09.009", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5JQE" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of caspase8 tDED" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "PGE", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Endoglin (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5I04", "evidence_id": "EV-PDB-5I04-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.42 }, "provenance": { "deposit_id": "5I04", "doi": "10.1016/j.celrep.2017.05.011", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5I04" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the orphan region of human endoglin/CD105" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Endoglin (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5HZV", "evidence_id": "EV-PDB-5HZV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "5HZV", "doi": "10.1016/j.celrep.2017.05.011", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5HZV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the zona pellucida module of human endoglin/CD105" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "PEG", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "NLRP12-PYD with MBP tag (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5H7N", "evidence_id": "EV-PDB-5H7N-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.849 }, "provenance": { "deposit_id": "5H7N", "doi": "10.1038/srep40991", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5H7N" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human NLRP12-PYD with a MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CIT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -83.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Apoptosis-associated speck-like protein containing a CARD (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5GPQ", "evidence_id": "EV-PDB-5GPQ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "5GPQ", "doi": "10.1111/febs.14514", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5GPQ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of zebrafish ASC CARD Domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -83.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Apoptosis-associated speck-like protein containing a CARD (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5GPP", "evidence_id": "EV-PDB-5GPP-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "5GPP", "doi": "10.1111/febs.14514", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5GPP" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of zebrafish ASC PYD domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MALTOSE-BINDING PERIPLASMIC PROTEIN, HANTAVIRUS NUCLEOPROTEIN (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5FSG", "evidence_id": "EV-PDB-5FSG-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.209 }, "provenance": { "deposit_id": "5FSG", "doi": "10.1016/J.CELREP.2016.02.005", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5FSG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of the hantavirus nucleoprotein provides insights into the mechanism of RNA encapsidation and a template for drug design" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5E24", "evidence_id": "EV-PDB-5E24-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.14 }, "provenance": { "deposit_id": "5E24", "doi": "10.1371/journal.pbio.1002509", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5E24" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of the Su(H)-Hairless-DNA Repressor Complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EYC" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -196.15 }, "construct": { "description": "Maltose-binding periplasmic protein (chains B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5CBN", "evidence_id": "EV-PDB-5CBN-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "5CBN", "doi": "10.1038/ncomms11031", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5CBN" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5BMY", "evidence_id": "EV-PDB-5BMY-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.001 }, "provenance": { "deposit_id": "5BMY", "doi": "10.1038/srep34654", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5BMY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of hPin1 WW domain (5-21) fused with maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "TNFRSF25 death domain (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5YEV", "evidence_id": "EV-PDB-5YEV-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "5YEV", "doi": "10.1111/febs.14834", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5YEV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Murine DR3 death domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CIT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Repressor protein cI,Maltose-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5ZCA", "evidence_id": "EV-PDB-5ZCA-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.801 }, "provenance": { "deposit_id": "5ZCA", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5ZCA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of lambda repressor (1-20) fused with maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "FJV" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6CXS", "evidence_id": "EV-PDB-6CXS-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "6CXS", "doi": "10.1073/pnas.1918095117", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6CXS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Clostridium perfringens beta-glucuronidase bound with a novel, potent inhibitor 4-(8-(piperazin-1-yl)-1,2,3,4-tetrahydro-[1,2,3]triazino[4',5':4,5]thieno[2,3-c]isoquinolin-5-yl)morpholine" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EOH", "GOL", "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Dual specificity protein phosphatase 1 (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6D65", "evidence_id": "EV-PDB-6D65-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.348 }, "provenance": { "deposit_id": "6D65", "doi": "10.1107/S2053230X18009901", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6D65" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the human dual specificity phosphatase 1 catalytic domain (C258S) as a maltose binding protein fusion in complex with the designed AR protein off7" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "DAL", "EDO", "GLY", "PEG", "PG4", "PGE", "PO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Dual specificity protein phosphatase 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6D66", "evidence_id": "EV-PDB-6D66-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.226 }, "provenance": { "deposit_id": "6D66", "doi": "10.1107/S2053230X18009901", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6D66" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the human dual specificity 1 catalytic domain (C258S) as a maltose binding protein fusion in complex with the designed AR protein mbp3_16" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBL", "evidence_id": "EV-PDB-6DBL-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 5.0 }, "provenance": { "deposit_id": "6DBL", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBL" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBQ", "evidence_id": "EV-PDB-6DBQ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.22 }, "provenance": { "deposit_id": "6DBQ", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBQ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "K", "LMT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Nanobody,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6HD8", "evidence_id": "EV-PDB-6HD8-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "6HD8", "doi": "10.7554/eLife.53683", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6HD8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the potassium channel MtTMEM175 in complex with a Nanobody-MBP fusion protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "LMT", "RB", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Nanobody,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6HD9", "evidence_id": "EV-PDB-6HD9-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.5 }, "provenance": { "deposit_id": "6HD9", "doi": "10.7554/eLife.53683", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6HD9" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the potassium channel MtTMEM175 with rubidium" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CS", "LMT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Nanobody,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6HDA", "evidence_id": "EV-PDB-6HDA-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "6HDA", "doi": "10.7554/eLife.53683", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6HDA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the potassium channel MtTMEM175 with cesium" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "K", "LMT", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Nanobody,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6HDB", "evidence_id": "EV-PDB-6HDB-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "6HDB", "doi": "10.7554/eLife.53683", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6HDB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the potassium channel MtTMEM175 with zinc" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "K", "LMT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Nanobody,Maltose/maltodextrin-binding periplasmic protein,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6HDC", "evidence_id": "EV-PDB-6HDC-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.4 }, "provenance": { "deposit_id": "6HDC", "doi": "10.7554/eLife.53683", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6HDC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the potassium channel MtTMEM175 T38A variant in complex with a Nanobody-MBP fusion protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Mitochondrial import inner membrane translocase subunit TIM21 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6K7D", "evidence_id": "EV-PDB-6K7D-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "6K7D", "doi": "10.1016/j.bbagen.2019.129418", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6K7D" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBPapo-Tim21 fusion protein with a 16-residue helical linker" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Mitochondrial import inner membrane translocase subunit TIM21 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6K7E", "evidence_id": "EV-PDB-6K7E-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.534 }, "provenance": { "deposit_id": "6K7E", "doi": "10.1016/j.bbagen.2019.129418", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6K7E" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBPapo-Tim21 fusion protein with a 17-residue helical linker" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "RAP" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "chimera of Maltose/maltodextrin-binding periplasmic protein and Peptidyl-prolyl cis-trans isomerase FKBP1A (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6M4V", "evidence_id": "EV-PDB-6M4V-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.92 }, "provenance": { "deposit_id": "6M4V", "doi": "10.1038/s41592-020-0913-x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6M4V" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused split FKBP in complex with rapamycin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 10.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein-tyrosine kinase 2-beta (chains A,B,C,D,E,F)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6LF3", "evidence_id": "EV-PDB-6LF3-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.2 }, "provenance": { "deposit_id": "6LF3", "doi": "10.1038/s41598-019-56718-y", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6LF3" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "3D domain-swapped dimer of the maltose-binding protein fused to a fragment of the protein-tyrosine kinase 2-beta" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 10.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Focal adhesion kinase 1 (chains A,B,X,Y)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6LES", "evidence_id": "EV-PDB-6LES-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.004 }, "provenance": { "deposit_id": "6LES", "doi": "10.1038/s41598-019-56718-y", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6LES" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "3D domain-swapped dimer of the maltose-binding protein fused to a fragment of the focal adhesion kinase" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "caspase-11-CARD (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6KXG", "evidence_id": "EV-PDB-6KXG-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.805 }, "provenance": { "deposit_id": "6KXG", "doi": "10.1038/s41421-020-00201-w", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6KXG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of caspase-11-CARD" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -83.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Apoptosis-associated speck-like protein containing a CARD (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6KI0", "evidence_id": "EV-PDB-6KI0-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "6KI0", "doi": "10.1038/s41419-020-03342-8", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6KI0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Human ASC-CARD" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,LINKER,hREV7,LINKER,Invasin IpaB,hREV3 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6KEA", "evidence_id": "EV-PDB-6KEA-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.35 }, "provenance": { "deposit_id": "6KEA", "doi": "10.1074/jbc.RA119.010123", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6KEA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "crystal structure of MBP-tagged REV7-IpaB complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Mitochondrial import inner membrane translocase subunit TIM21 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6K7F", "evidence_id": "EV-PDB-6K7F-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "6K7F", "doi": "10.1016/j.bbagen.2019.129418", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6K7F" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBPholo-Tim21 fusion protein with a 17-residue helical linker" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose transport system, substrate-binding protein,TP53-regulated inhibitor of apoptosis 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6I4Y", "evidence_id": "EV-PDB-6I4Y-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.91 }, "provenance": { "deposit_id": "6I4Y", "doi": "10.1038/s41467-019-09089-x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6I4Y" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "X-ray structure of the human mitochondrial PRELID3b-TRIAP1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Tightly bound bacterial magnetic particle protein,Maltose-binding periplasmic protein (chains A,B,D,G)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6EQZ", "evidence_id": "EV-PDB-6EQZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.293 }, "provenance": { "deposit_id": "6EQZ", "doi": "10.1107/S2059798317017491", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6EQZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "A MamC-MIC insertion in MBP scaffold at position K170" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EOH", "J7G" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Probable global transcription activator SNF2L2 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6EG3", "evidence_id": "EV-PDB-6EG3-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.84 }, "provenance": { "deposit_id": "6EG3", "doi": "10.1021/acs.jmedchem.8b01318", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6EG3" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human BRM in complex with compound 15" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "IPA", "J7J" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Probable global transcription activator SNF2L2 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6EG2", "evidence_id": "EV-PDB-6EG2-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.98 }, "provenance": { "deposit_id": "6EG2", "doi": "10.1021/acs.jmedchem.8b01318", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6EG2" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human BRM in complex with compound 16" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "6AK", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Induced myeloid leukemia cell differentiation protein Mcl-1 homolog - MBP chimera (chains A,B,C,D,E,F,G,H)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DM8", "evidence_id": "EV-PDB-6DM8-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "6DM8", "doi": "10.1021/acs.biochem.8b00626", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DM8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Understanding the Species Selectivity of Myeloid cell leukemia-1 (Mcl-1) inhibitors" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.6, "salt_mM": null, "temperature_c": -73.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains D,H)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DKS", "evidence_id": "EV-PDB-6DKS-4", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.78 }, "provenance": { "deposit_id": "6DKS", "doi": "10.1016/j.celrep.2018.12.097", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DKS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of the Rbpj-SHARP-DNA Repressor Complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MMB-1 Cas6 Fused to Maltose Binding Protein,CRISPR-associated endonuclease Cas1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DD5", "evidence_id": "EV-PDB-6DD5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.85 }, "provenance": { "deposit_id": "6DD5", "doi": "10.1016/j.molcel.2018.09.013", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DD5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of the Cas6 Domain of Marinomonas mediterranea MMB-1 Cas6-RT-Cas1 Fusion Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBX", "evidence_id": "EV-PDB-6DBX-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.2 }, "provenance": { "deposit_id": "6DBX", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBX" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS substrate DNA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBW", "evidence_id": "EV-PDB-6DBW-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.7 }, "provenance": { "deposit_id": "6DBW", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBW" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS substrate DNA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBV", "evidence_id": "EV-PDB-6DBV-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.29 }, "provenance": { "deposit_id": "6DBV", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBV" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBV", "evidence_id": "EV-PDB-6DBV-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.29 }, "provenance": { "deposit_id": "6DBV", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBV" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBU", "evidence_id": "EV-PDB-6DBU-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.9 }, "provenance": { "deposit_id": "6DBU", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBU" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBT", "evidence_id": "EV-PDB-6DBT-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.3 }, "provenance": { "deposit_id": "6DBT", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBT" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBR", "evidence_id": "EV-PDB-6DBR-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.0 }, "provenance": { "deposit_id": "6DBR", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBR" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with one melted RSS and one unmelted RSS" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBO", "evidence_id": "EV-PDB-6DBO-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.4 }, "provenance": { "deposit_id": "6DBO", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBO" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBJ", "evidence_id": "EV-PDB-6DBJ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "6DBJ", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBJ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS nicked DNA intermediates" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Recombination activating gene 1 - MBP chimera (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6DBI", "evidence_id": "EV-PDB-6DBI-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.4 }, "provenance": { "deposit_id": "6DBI", "doi": "10.1038/s41594-018-0098-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6DBI" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS nicked DNA intermediates" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "PEG", "PO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Dual specificity protein phosphatase 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6D67", "evidence_id": "EV-PDB-6D67-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.55 }, "provenance": { "deposit_id": "6D67", "doi": "10.1107/S2053230X18009901", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6D67" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the human dual specificity phosphatase 1 catalytic domain (C258S) as a maltose binding protein fusion (maltose bound form) in complex with the designed AR protein mbp3_16" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6D1U", "evidence_id": "EV-PDB-6D1U-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.05 }, "provenance": { "deposit_id": "6D1U", "doi": "10.1074/jbc.RA118.005062", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6D1U" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the human CLR:RAMP1 extracellular domain heterodimer in complex with adrenomedullin 2/intermedin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose-binding periplasmic protein, Centromere protein N chimera (chains N)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6BUZ", "evidence_id": "EV-PDB-6BUZ-7", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.92 }, "provenance": { "deposit_id": "6BUZ", "doi": "10.1126/science.aar2781", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6BUZ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of CENP-A nucleosome in complex with kinetochore protein CENP-N" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.9, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Dual specificity protein phosphatase 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6APX", "evidence_id": "EV-PDB-6APX-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.491 }, "provenance": { "deposit_id": "6APX", "doi": "10.1002/pro.3328", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6APX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human dual specificity phosphatase 1 catalytic domain (C258S) as a maltose binding protein fusion in complex with the monobody YSX1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "MES", "PEG", "PGE", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "anti-CRISPR protein AcrF1 fused with C-terminal MBP tag (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6ANV", "evidence_id": "EV-PDB-6ANV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.265 }, "provenance": { "deposit_id": "6ANV", "doi": "10.1016/j.cell.2017.09.006", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6ANV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of anti-CRISPR protein AcrF1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": 21.85 }, "construct": { "description": "Maltose-binding periplasmic protein,Trigger factor (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5ZR0", "evidence_id": "EV-PDB-5ZR0-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "5ZR0", "doi": "10.1074/jbc.RA118.003579", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5ZR0" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "Solution structure of peptidyl-prolyl cis/trans isomerase domain of Trigger Factor in complex with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Tumor necrosis factor receptor superfamily, member 25 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5ZNZ", "evidence_id": "EV-PDB-5ZNZ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.55 }, "provenance": { "deposit_id": "5ZNZ", "doi": "10.1111/febs.14834", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5ZNZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of mDR3 DD with MBP tag mutant-I387V" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Tumor necrosis factor receptor superfamily, member 25 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5ZNY", "evidence_id": "EV-PDB-5ZNY-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.74 }, "provenance": { "deposit_id": "5ZNY", "doi": "10.1111/febs.14834", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5ZNY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of mDR3_DD-C363G with MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Extracellular solute-binding protein family 1,viral genome protein (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5Z0V", "evidence_id": "EV-PDB-5Z0V-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.913 }, "provenance": { "deposit_id": "5Z0V", "doi": "10.1038/s41422-018-0007-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5Z0V" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structural insight into the Zika virus capsid encapsulating the viral genome" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Extracellular solute-binding protein family 1,viral genome protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5Z0R", "evidence_id": "EV-PDB-5Z0R-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.05 }, "provenance": { "deposit_id": "5Z0R", "doi": "10.1038/s41422-018-0007-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5Z0R" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structural insight into the Zika virus capsid encapsulating the viral genome" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "Human TNRSF25 death domain (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5YGS", "evidence_id": "EV-PDB-5YGS-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.691 }, "provenance": { "deposit_id": "5YGS", "doi": "10.1111/febs.14834", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5YGS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human TNFRSF25 death domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "TNFRSF25 death domain (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5YGP", "evidence_id": "EV-PDB-5YGP-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.09 }, "provenance": { "deposit_id": "5YGP", "doi": "10.1111/febs.14834", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5YGP" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human TNFRSF25 death domain mutant-D412E" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -83.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Protein B (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/5Y2G", "evidence_id": "EV-PDB-5Y2G-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "5Y2G", "doi": "10.1107/S205979831901057X", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/5Y2G" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP tagged GBS CAMP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "JLE", "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QZ7", "evidence_id": "EV-PDB-6QZ7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "6QZ7", "doi": "10.1021/acs.jmedchem.9b00134", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QZ7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 8b" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,De novo design protein D53 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7FBD", "evidence_id": "EV-PDB-7FBD-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.85 }, "provenance": { "deposit_id": "7FBD", "doi": "10.1038/s41586-021-04383-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7FBD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "De novo design protein D53 with MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.24, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,De novo design protein D22 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7FBC", "evidence_id": "EV-PDB-7FBC-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.85 }, "provenance": { "deposit_id": "7FBC", "doi": "10.1038/s41586-021-04383-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7FBC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "De novo design protein D22 with MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,de novo designed protein D12 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7FBB", "evidence_id": "EV-PDB-7FBB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.307 }, "provenance": { "deposit_id": "7FBB", "doi": "10.1038/s41586-021-04383-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7FBB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "De novo design protein D12 with MBP tag" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,ISWI one complex protein 4 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7E29", "evidence_id": "EV-PDB-7E29-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.303 }, "provenance": { "deposit_id": "7E29", "doi": "10.1093/nar/gkac077", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7E29" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of Saccharomyces cerevisiae Ioc4 PWWP domain fused with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Aspartyl aminopeptidase 1,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein (chains A,C,E,G,I,K,M,O,Q,S,V,X)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7DDE", "evidence_id": "EV-PDB-7DDE-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.26 }, "provenance": { "deposit_id": "7DDE", "doi": "10.15252/embj.2020107497", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7DDE" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the Ape4 and Nbr1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Alpha-mannosidase,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein (chains A,C,E,G)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7DD9", "evidence_id": "EV-PDB-7DD9-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "7DD9", "doi": "10.15252/embj.2020107497", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7DD9" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the Ams1 and Nbr1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ASC", "EDO", "FE2", "IPA" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -100.15 }, "construct": { "description": "Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7CY8", "evidence_id": "EV-PDB-7CY8-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "7CY8", "doi": "10.1038/s41467-021-21061-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7CY8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of CMD1 in complex with 5mC-DNA and vitamin C" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "FE2", "IPA" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7CY7", "evidence_id": "EV-PDB-7CY7-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.15 }, "provenance": { "deposit_id": "7CY7", "doi": "10.1038/s41467-021-21061-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7CY7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of CMD1 in complex with DNA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "FE2", "PG4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7CY6", "evidence_id": "EV-PDB-7CY6-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "7CY6", "doi": "10.1038/s41467-021-21061-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7CY6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of CMD1 in complex with 5mC-DNA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ASC", "CIT", "FE" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7CY5", "evidence_id": "EV-PDB-7CY5-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "7CY5", "doi": "10.1038/s41467-021-21061-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7CY5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of CMD1 in complex with vitamin C" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CIT", "FE" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7CY4", "evidence_id": "EV-PDB-7CY4-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "7CY4", "doi": "10.1038/s41467-021-21061-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7CY4" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of CMD1 in apo form" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose Binding Protein tag, linker,CENP-C (chains K,L)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7BY0", "evidence_id": "EV-PDB-7BY0-7", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.5 }, "provenance": { "deposit_id": "7BY0", "doi": "10.15252/embj.2020105671", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7BY0" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The cryo-EM structure of CENP-A nucleosome in complex with the phosphorylated CENP-C" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,Centromere protein N (chains M,N)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7BXT", "evidence_id": "EV-PDB-7BXT-8", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.2 }, "provenance": { "deposit_id": "7BXT", "doi": "10.15252/embj.2020105671", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7BXT" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The cryo-EM structure of CENP-A nucleosome in complex with CENP-C peptide and CENP-N N-terminal domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Islet amyloid polypeptide (chains A,B,D,E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7BG0", "evidence_id": "EV-PDB-7BG0-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.89 }, "provenance": { "deposit_id": "7BG0", "doi": "10.1021/acs.jmedchem.1c00565", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7BG0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Fusion of MBP and the backbone of the long-acting amylin analog AM833." }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Maltodextrin-binding protein,Maltodextrin-binding protein,ADAMTS13 CUB12,A disintegrin and metalloproteinase with thrombospondin motifs 13,A disintegrin and metalloproteinase with thrombospondin motifs 13,A disintegrin and metalloproteinase with thrombospondin motifs 13 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7B01", "evidence_id": "EV-PDB-7B01-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "7B01", "doi": "10.1126/sciadv.abg4403", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7B01" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "ADAMTS13-CUB12" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PG4", "QLQ", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6ZHO", "evidence_id": "EV-PDB-6ZHO-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.6 }, "provenance": { "deposit_id": "6ZHO", "doi": "10.1021/acs.jmedchem.0c01003", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6ZHO" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a CGRP receptor ectodomain heterodimer with bound high affinity inhibitor" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PJQ" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Short transient receptor potential channel 5 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6YSN", "evidence_id": "EV-PDB-6YSN-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "6YSN", "doi": "10.1038/s42003-020-01437-8", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6YSN" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Human TRPC5 in complex with Pico145 (HC-608)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "OK5", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6YBL", "evidence_id": "EV-PDB-6YBL-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "6YBL", "doi": "10.1021/acs.jmedchem.0c01234", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6YBL" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 9m" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "OK2", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6YBK", "evidence_id": "EV-PDB-6YBK-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "6YBK", "doi": "10.1021/acs.jmedchem.0c01234", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6YBK" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 4d" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "OJW", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6YBJ", "evidence_id": "EV-PDB-6YBJ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "6YBJ", "doi": "10.1021/acs.jmedchem.0c01234", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6YBJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 3e" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "EDO", "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein, Mosquito protein AZ1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6XRX", "evidence_id": "EV-PDB-6XRX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "6XRX", "doi": "10.1073/pnas.2019251118", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6XRX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the mosquito protein AZ1 as an MBP fusion" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "DMS", "V5S", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Sugar ABC transporter substrate-binding protein,Triggering receptor expressed on myeloid cells 2 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6XDS", "evidence_id": "EV-PDB-6XDS-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.466 }, "provenance": { "deposit_id": "6XDS", "doi": "10.1016/j.pep.2020.105796", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6XDS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-TREM2 Ig domain fusion with fragment, 2-((4-bromophenyl)amino)ethan-1-ol" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CAC", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein, C->U-editing enzyme APOBEC-1 chimera (chains A,B,C,D,E,F,G,H)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6X91", "evidence_id": "EV-PDB-6X91-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.51 }, "provenance": { "deposit_id": "6X91", "doi": "10.1093/narcan/zcaa027", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6X91" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused human APOBEC1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.8, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6WGZ", "evidence_id": "EV-PDB-6WGZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "6WGZ", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6WGZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of HyBcl-2-4 with HyBak1 BH3" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "SO4", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Reversion-inducing cysteine-rich protein with Kazal motifs fusion (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6WBJ", "evidence_id": "EV-PDB-6WBJ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.651 }, "provenance": { "deposit_id": "6WBJ", "doi": "10.1073/pnas.2006332117", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6WBJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "High resolution crystal structure of mRECK(CC4) in fusion with engineered MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Reversion-inducing cysteine-rich protein with Kazal motifs fusion (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6WBH", "evidence_id": "EV-PDB-6WBH-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.455 }, "provenance": { "deposit_id": "6WBH", "doi": "10.1073/pnas.2006332117", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6WBH" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of mRECK(CC4) in fusion with engineered MBP at medium resolution" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PEG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Vip3Aa (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6VLS", "evidence_id": "EV-PDB-6VLS-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.2 }, "provenance": { "deposit_id": "6VLS", "doi": "10.3390/toxins12070438", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6VLS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of C-terminal fragment of Vip3A toxin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "FMT", "NH2", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.3, "salt_mM": null, "temperature_c": -168.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 2,Calcitonin gene-related peptide type 1 receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6V2E", "evidence_id": "EV-PDB-6V2E-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.83 }, "provenance": { "deposit_id": "6V2E", "doi": "10.1021/acsptsci.0c00031", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6V2E" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the human CLR:RAMP2 extracellular domain heterodimer with bound high-affinity adrenomedullin S45R/K46L/S48G/Q50W variant" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -0.15 }, "construct": { "description": "Maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6USM", "evidence_id": "EV-PDB-6USM-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.37 }, "provenance": { "deposit_id": "6USM", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6USM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of nuclease domain of human parvovirus B19 non-structural protein 1 in complex with zinc" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6TZC", "evidence_id": "EV-PDB-6TZC-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.41 }, "provenance": { "deposit_id": "6TZC", "doi": "10.3390/v11090789", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6TZC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal Structure of African Swine Fever Virus A179L with the Autophagy Regulator Beclin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "K", "LMT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Nanobody, Maltose/maltodextrin-binding periplasmic protein,Maltodextrin-binding protein,Maltose/maltodextrin-binding periplasmic protein (chains A,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6SWR", "evidence_id": "EV-PDB-6SWR-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.2 }, "provenance": { "deposit_id": "6SWR", "doi": "10.7554/eLife.53683", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6SWR" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the lysosomal potassium channel MtTMEM175 T38A mutant soaked with zinc" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,CREB-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6SQC", "evidence_id": "EV-PDB-6SQC-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.28 }, "provenance": { "deposit_id": "6SQC", "doi": "10.1039/d0sc04482b", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6SQC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of complex between nuclear coactivator binding domain of CBP and [1040-1086]ACTR containing alpha-methylated Leu1055 and Leu1076" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PEG", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.8, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein E6,Mastermind-like protein 1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6SMV", "evidence_id": "EV-PDB-6SMV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.14 }, "provenance": { "deposit_id": "6SMV", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6SMV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of HPV49 E6 protein in complex with MAML1 LxxLL motif" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein E6,Ubiquitin-protein ligase E3A (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6SLM", "evidence_id": "EV-PDB-6SLM-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "6SLM", "doi": "10.1128/JVI.00730-20", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6SLM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of full-length HPV31 E6 oncoprotein in complex with LXXLL peptide of ubiquitin ligase E6AP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.8, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Interferon regulatory factor 3 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6SJA", "evidence_id": "EV-PDB-6SJA-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.5 }, "provenance": { "deposit_id": "6SJA", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6SJA" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of HPV16 E6 oncoprotein in complex with IRF3 LxxLL motif" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Interferon regulatory factor 3 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6SIV", "evidence_id": "EV-PDB-6SIV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.752 }, "provenance": { "deposit_id": "6SIV", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6SIV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of HPV16 E6 oncoprotein in complex with mutant IRF3 LxxLL motif" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "JLH", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QYO", "evidence_id": "EV-PDB-6QYO-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "6QYO", "doi": "10.1021/acs.jmedchem.9b00134", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QYO" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 18a" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "JL8", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QYN", "evidence_id": "EV-PDB-6QYN-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "6QYN", "doi": "10.1021/acs.jmedchem.9b00134", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QYN" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 10d" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "JLE", "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QYL", "evidence_id": "EV-PDB-6QYL-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "6QYL", "doi": "10.1021/acs.jmedchem.9b00134", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QYL" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 8a" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "JLB", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QYK", "evidence_id": "EV-PDB-6QYK-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "6QYK", "doi": "10.1021/acs.jmedchem.9b00134", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QYK" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 7a" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "JKQ", "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QXJ", "evidence_id": "EV-PDB-6QXJ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.7 }, "provenance": { "deposit_id": "6QXJ", "doi": "10.1021/acs.jmedchem.9b00134", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QXJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with compound 6a" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CU", "PO4", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Nucleoporin, putative (chains A,B,C,D,E,F,G,H,I,J,K,L)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QUG", "evidence_id": "EV-PDB-6QUG-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "6QUG", "doi": "10.1107/S2059798320013741", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QUG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "GHK tagged MBP-Nup98(1-29)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "J1N", "NA", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6QGD", "evidence_id": "EV-PDB-6QGD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.8 }, "provenance": { "deposit_id": "6QGD", "doi": "10.1021/acsomega.9b00611", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6QGD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of human Mcl-1 in complex with thienopyrimidine inhibitor" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Fusion of Maltose-binding protein and voltage-gated sodium channel NavAb (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6P6W", "evidence_id": "EV-PDB-6P6W-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.0 }, "provenance": { "deposit_id": "6P6W", "doi": "10.1016/j.cell.2019.06.031", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6P6W" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of voltage-gated sodium channel NavAb N49K/L109A/M116V/G94C/Q150C disulfide crosslinked mutant in the resting state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "FPP", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.7, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6OB5", "evidence_id": "EV-PDB-6OB5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.208 }, "provenance": { "deposit_id": "6OB5", "doi": "10.1126/science.aax8780", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6OB5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Computationally-designed, modular sense/response system (S3-2D)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein, NACHT, LRR and PYD domains-containing protein 6 chimera (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6NDJ", "evidence_id": "EV-PDB-6NDJ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.27 }, "provenance": { "deposit_id": "6NDJ", "doi": "10.1073/pnas.1817221116", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6NDJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human NLRP6 PYD domain with MBP fusion" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Guanine nucleotide-binding protein G(t) subunit alpha-2 (chains M)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6N85", "evidence_id": "EV-PDB-6N85-2", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "6N85", "doi": "10.1038/s41467-019-11088-x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6N85" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Resistance to inhibitors of cholinesterase 8A (Ric8A) protein in complex with MBP-tagged transducin-alpha residues 327-350" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Guanine nucleotide-binding protein G(t) subunit alpha-2 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6N84", "evidence_id": "EV-PDB-6N84-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.75 }, "provenance": { "deposit_id": "6N84", "doi": "10.1038/s41467-019-11088-x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6N84" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-fusion protein of transducin-alpha residues 327-350" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "RAP", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "chimera of Maltose/maltodextrin-binding periplasmic protein and Peptidyl-prolyl cis-trans isomerase FKBP1A (chains A,B,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/6M4W", "evidence_id": "EV-PDB-6M4W-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.11 }, "provenance": { "deposit_id": "6M4W", "doi": "10.1038/s41592-020-0913-x", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/6M4W" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused split FKBP-FRB T2098L mutant in complex with rapamycin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ATP", "MN", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Protein phosphatase 1 regulatory subunit 15A,Maltose/maltodextrin-binding periplasmic protein (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7NZM", "evidence_id": "EV-PDB-7NZM-5", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.96 }, "provenance": { "deposit_id": "7NZM", "doi": "10.1038/s41594-021-00666-7", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7NZM" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of pre-dephosphorylation complex of phosphorylated eIF2alpha with trapped holophosphatase (PP1A_D64A/PPP1R15A/G-actin/DNase I)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT0", "evidence_id": "EV-PDB-7TT0-5", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.3 }, "provenance": { "deposit_id": "7TT0", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT0" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP class 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT6", "evidence_id": "EV-PDB-7TT6-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.3 }, "provenance": { "deposit_id": "7TT6", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT6" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP in the intermediate-open EspP state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT7", "evidence_id": "EV-PDB-7TT7-5", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.8 }, "provenance": { "deposit_id": "7TT7", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT7" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP in the barrelized EspP/continuous open BamA state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein E6 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7UAJ", "evidence_id": "EV-PDB-7UAJ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.25 }, "provenance": { "deposit_id": "7UAJ", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7UAJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of apo HPV16 E6" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NCA", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -180.15 }, "construct": { "description": "MBP-fused OspC3 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7WR3", "evidence_id": "EV-PDB-7WR3-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.87 }, "provenance": { "deposit_id": "7WR3", "doi": "10.1038/s41594-022-00888-3", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7WR3" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused OspC3 in complex with calmodulin" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,Gastrin-releasing peptide receptor (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7W40", "evidence_id": "EV-PDB-7W40-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "7W40", "doi": "10.1073/pnas.2216230120", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7W40" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM Structure of Human Gastrin Releasing Peptide Receptor in complex with the agonist Bombesin (6-14) [D-Phe6, beta-Ala11, Phe13, Nle14] and Gq heterotrimers" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,Gastrin-releasing peptide receptor (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7W3Z", "evidence_id": "EV-PDB-7W3Z-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "7W3Z", "doi": "10.1073/pnas.2216230120", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7W3Z" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM Structure of Human Gastrin Releasing Peptide Receptor in complex with the agonist Gastrin Releasing Peptide and Gq heterotrimers" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Ams1, Nbr1 and malE fusion protein (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VQO", "evidence_id": "EV-PDB-7VQO-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.19 }, "provenance": { "deposit_id": "7VQO", "doi": "10.1038/s41467-022-31439-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VQO" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of Ams1 bound to the FW domain of Nbr1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VN8", "evidence_id": "EV-PDB-7VN8-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.04 }, "provenance": { "deposit_id": "7VN8", "doi": "10.1038/s41477-022-01289-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VN8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning GTCACGTGAC" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VN7", "evidence_id": "EV-PDB-7VN7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.11 }, "provenance": { "deposit_id": "7VN7", "doi": "10.1038/s41477-022-01289-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VN7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning GACACGTGTC" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VN6", "evidence_id": "EV-PDB-7VN6-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.79 }, "provenance": { "deposit_id": "7VN6", "doi": "10.1038/s41477-022-01289-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VN6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning CGCACGTGCG" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VN5", "evidence_id": "EV-PDB-7VN5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "7VN5", "doi": "10.1038/s41477-022-01289-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VN5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning TTCACGTGAA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VN4", "evidence_id": "EV-PDB-7VN4-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "7VN4", "doi": "10.1038/s41477-022-01289-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VN4" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning TCCACGTGGA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VN3", "evidence_id": "EV-PDB-7VN3-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.94 }, "provenance": { "deposit_id": "7VN3", "doi": "10.1038/s41477-022-01289-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VN3" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning CACACGTGTG" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -178.15 }, "construct": { "description": "Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1 (chains A,C)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VN2", "evidence_id": "EV-PDB-7VN2-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.42 }, "provenance": { "deposit_id": "7VN2", "doi": "10.1038/s41477-022-01289-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VN2" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP-fused BIL1/BZR1 (21-90) in complex with double-stranded DNA contaning ATCACGTGAT" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,RING finger protein Z (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VH1", "evidence_id": "EV-PDB-7VH1-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.2 }, "provenance": { "deposit_id": "7VH1", "doi": "10.1038/s41467-021-26432-3", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VH1" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of Machupo virus dimeric L-Z complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,RING finger protein Z (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7VGQ", "evidence_id": "EV-PDB-7VGQ-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.0 }, "provenance": { "deposit_id": "7VGQ", "doi": "10.1038/s41467-021-26432-3", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7VGQ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of Machupo virus polymerase L in complex with matrix protein Z" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,POU domain, class 5, transcription factor 1 (chains L,M)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7U0I", "evidence_id": "EV-PDB-7U0I-7", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "7U0I", "doi": "10.1016/j.molcel.2023.05.030", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7U0I" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of LIN28b nucleosome bound 2 OCT4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,POU domain, class 5, transcription factor 1 (chains K,L,M)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7U0G", "evidence_id": "EV-PDB-7U0G-7", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "7U0G", "doi": "10.1016/j.molcel.2023.05.030", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7U0G" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "structure of LIN28b nucleosome bound 3 OCT4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT5", "evidence_id": "EV-PDB-7TT5-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.3 }, "provenance": { "deposit_id": "7TT5", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT5" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP in the open-sheet EspP state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT4", "evidence_id": "EV-PDB-7TT4-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.2 }, "provenance": { "deposit_id": "7TT4", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT4" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP class 6" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT3", "evidence_id": "EV-PDB-7TT3-6", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.3 }, "provenance": { "deposit_id": "7TT3", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT3" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP class 5" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT2", "evidence_id": "EV-PDB-7TT2-6", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.2 }, "provenance": { "deposit_id": "7TT2", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT2" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP class 3" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TT1", "evidence_id": "EV-PDB-7TT1-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.3 }, "provenance": { "deposit_id": "7TT1", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TT1" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP class 4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7TSZ", "evidence_id": "EV-PDB-7TSZ-6", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.5 }, "provenance": { "deposit_id": "7TSZ", "doi": "10.1016/j.cell.2022.02.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7TSZ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BamABCDE bound to substrate EspP class 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Putative pilin protein chimera (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7T31", "evidence_id": "EV-PDB-7T31-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "7T31", "doi": "10.1016/j.jbc.2022.102449", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7T31" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "X-ray Structure of Clostridiodies difficile PilW" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Ribonucleoside-diphosphate reductase large subunit (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7RW6", "evidence_id": "EV-PDB-7RW6-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.55 }, "provenance": { "deposit_id": "7RW6", "doi": "10.1126/sciadv.abm2827", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7RW6" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "BORF2-APOBEC3Bctd Complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,Autotransporter outer membrane beta-barrel domain-containing protein chimera (chains G)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7RJ5", "evidence_id": "EV-PDB-7RJ5-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 7.0 }, "provenance": { "deposit_id": "7RJ5", "doi": "10.1038/s41467-021-27449-4", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7RJ5" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The structure of BAM in complex with EspP at 7 Angstrom resolution" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ATP", "CA" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,RTX-toxin (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7P1H", "evidence_id": "EV-PDB-7P1H-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.9 }, "provenance": { "deposit_id": "7P1H", "doi": "10.1038/s41467-021-26889-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7P1H" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the V. vulnificus ExoY-G-actin-profilin complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "GH3", "MG", "PO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Adenylate cyclase ExoY (chains K,L,M,N,O)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7P1G", "evidence_id": "EV-PDB-7P1G-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.2 }, "provenance": { "deposit_id": "7P1G", "doi": "10.1038/s41467-021-26889-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7P1G" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the P. aeruginosa ExoY-F-actin complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "7IU", "PG4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7P0I", "evidence_id": "EV-PDB-7P0I-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "7P0I", "doi": "10.1021/acschemneuro.1c00696", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7P0I" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor Compound 13" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "7IR", "PG4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7P0F", "evidence_id": "EV-PDB-7P0F-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.85 }, "provenance": { "deposit_id": "7P0F", "doi": "10.1021/acschemneuro.1c00696", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7P0F" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0028125" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "P6G", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "ProMacrobody 21 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7OMT", "evidence_id": "EV-PDB-7OMT-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.0 }, "provenance": { "deposit_id": "7OMT", "doi": "10.1038/s41467-022-29459-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7OMT" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of ProMacrobody 21 with bound maltose" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "ProMacrobody 51,Maltodextrin-binding protein (chains D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7OMM", "evidence_id": "EV-PDB-7OMM-4", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.4 }, "provenance": { "deposit_id": "7OMM", "doi": "10.1038/s41467-022-29459-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7OMM" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of N. gonorhoeae LptDE in complex with ProMacrobodies (MBPs have not been built de novo)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "ProMacrobody 21,Maltodextrin-binding protein (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7OMM", "evidence_id": "EV-PDB-7OMM-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.4 }, "provenance": { "deposit_id": "7OMM", "doi": "10.1038/s41467-022-29459-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7OMM" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of N. gonorhoeae LptDE in complex with ProMacrobodies (MBPs have not been built de novo)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Guanine nucleotide exchange protein SMCR8,Guanine nucleotide exchange protein SMCR8,Maltose/maltodextrin-binding periplasmic protein (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7O2W", "evidence_id": "EV-PDB-7O2W-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "7O2W", "doi": "10.1371/journal.pbio.3001344", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7O2W" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the C9orf72-SMCR8 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -196.15 }, "construct": { "description": "Maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7MQ7", "evidence_id": "EV-PDB-7MQ7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.95 }, "provenance": { "deposit_id": "7MQ7", "doi": "10.1002/bit.27927", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7MQ7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Tetragonal Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "AU", "CL", "SO4", "branched: alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -196.15 }, "construct": { "description": "Maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7MQ6", "evidence_id": "EV-PDB-7MQ6-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.372 }, "provenance": { "deposit_id": "7MQ6", "doi": "10.1002/bit.27927", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7MQ6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Tetragonal Maltose Binding Protein in the presence of gold" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose", "branched: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Receptor tyrosine-protein kinase erbB-2,Maltose/maltodextrin-binding periplasmic protein (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7MN8", "evidence_id": "EV-PDB-7MN8-3", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.45 }, "provenance": { "deposit_id": "7MN8", "doi": "10.1038/s41586-021-04084-z", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7MN8" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the HER2/HER3/NRG1b Heterodimer Extracellular Domain bound to Trastuzumab Fab" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose", "branched: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Receptor tyrosine-protein kinase erbB-2,Maltose/maltodextrin-binding periplasmic protein (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7MN6", "evidence_id": "EV-PDB-7MN6-2", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.09 }, "provenance": { "deposit_id": "7MN6", "doi": "10.1038/s41586-021-04084-z", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7MN6" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the HER2 S310F/HER3/NRG1b Heterodimer Extracellular Domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose", "branched: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Receptor tyrosine-protein kinase erbB-2,Maltose/maltodextrin-binding periplasmic protein (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7MN5", "evidence_id": "EV-PDB-7MN5-3", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.93 }, "provenance": { "deposit_id": "7MN5", "doi": "10.1038/s41586-021-04084-z", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7MN5" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the HER2/HER3/NRG1b Heterodimer Extracellular Domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.9, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "ALK and LTK ligand 1,Maltodextrin-binding protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7MK7", "evidence_id": "EV-PDB-7MK7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.42815184462 }, "provenance": { "deposit_id": "7MK7", "doi": "10.1038/s41586-021-04141-7", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7MK7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Augmentor domain of augmentor-beta" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Outer membrane lipoprotein omp19 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7MHW", "evidence_id": "EV-PDB-7MHW-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.55 }, "provenance": { "deposit_id": "7MHW", "doi": "10.1016/j.csbj.2022.08.054", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7MHW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the protease inhibitor U-Omp19 from Brucella abortus fused to Maltose-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "AMP", "ATP", "TAK", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin ABC transporter substrate-binding protein MalE (chains M)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7M74", "evidence_id": "EV-PDB-7M74-4", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.93 }, "provenance": { "deposit_id": "7M74", "doi": "10.1126/science.abe7565", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7M74" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "ATP-bound AMP-activated protein kinase" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -163.15 }, "construct": { "description": "Maltodextrin-binding protein and Phosphoprotein fusion protein (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7KD4", "evidence_id": "EV-PDB-7KD4-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.312 }, "provenance": { "deposit_id": "7KD4", "doi": "10.3390/v13091737", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7KD4" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P21." }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Ion transport protein,Sodium channel protein type 9 subunit alpha chimera (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7K48", "evidence_id": "EV-PDB-7K48-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.6 }, "provenance": { "deposit_id": "7K48", "doi": "10.1016/j.molcel.2020.10.039", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7K48" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of NavAb/Nav1.7-VS2A chimera trapped in the resting state by tarantula toxin m3-Huwentoxin-IV" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A,C,E,G)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7JTR", "evidence_id": "EV-PDB-7JTR-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "7JTR", "doi": "10.1002/pro.4088", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7JTR" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Complex of maltose-binding protein (MBP) with single-chain Fv (scFv)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "AMP", "ATP", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin ABC transporter substrate-binding protein MalE (chains M)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7JIJ", "evidence_id": "EV-PDB-7JIJ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 5.5 }, "provenance": { "deposit_id": "7JIJ", "doi": "10.1126/science.abe7565", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7JIJ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "ATP-bound AMP-activated protein kinase" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "AMP", "ATP", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein (chains M)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7JHH", "evidence_id": "EV-PDB-7JHH-4", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.92 }, "provenance": { "deposit_id": "7JHH", "doi": "10.1126/science.abe7565", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7JHH" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Fab and nanobody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "AMP", "ATP", "TAK", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein (chains M)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7JHG", "evidence_id": "EV-PDB-7JHG-4", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.47 }, "provenance": { "deposit_id": "7JHG", "doi": "10.1126/science.abe7565", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7JHG" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Dorsomorphin (Compound C) and Fab-nanobody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "OK5", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8EKX", "evidence_id": "EV-PDB-8EKX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.55 }, "provenance": { "deposit_id": "8EKX", "doi": "10.1038/s43856-023-00380-z", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8EKX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with MIK665" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "WLW", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8EL0", "evidence_id": "EV-PDB-8EL0-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.917 }, "provenance": { "deposit_id": "8EL0", "doi": "10.1038/s43856-023-00380-z", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8EL0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with a macrocyclic compound" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "WME", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8EL1", "evidence_id": "EV-PDB-8EL1-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.406 }, "provenance": { "deposit_id": "8EL1", "doi": "10.1038/s43856-023-00380-z", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8EL1" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of MBP-Mcl-1 in complex with ABBV-467" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CDL", "GTP", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Pro-Macrobody 65, Maltose/maltodextrin-binding periplasmic protein chimera (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8G8W", "evidence_id": "EV-PDB-8G8W-3", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "8G8W", "doi": "10.1126/sciadv.adh4251", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8G8W" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Molecular mechanism of nucleotide inhibition of human uncoupling protein 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CDL", "GTP", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Pro-macrobody 71, Maltose/maltodextrin-binding periplasmic protein chimera (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8G8W", "evidence_id": "EV-PDB-8G8W-2", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "8G8W", "doi": "10.1126/sciadv.adh4251", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8G8W" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Molecular mechanism of nucleotide inhibition of human uncoupling protein 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein E6 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8GCR", "evidence_id": "EV-PDB-8GCR-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.38 }, "provenance": { "deposit_id": "8GCR", "doi": "10.1038/s41467-024-45920-w", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8GCR" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "HPV16 E6-E6AP-p53 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8SBU", "evidence_id": "EV-PDB-8SBU-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "8SBU", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8SBU" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fusion with HPPK from Methanocaldococcus jannaschii" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,EspP(b7-12) (chains F)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8SQB", "evidence_id": "EV-PDB-8SQB-6", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "8SQB", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8SQB" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The cryo-EM structure of the EcBAM/EspP(beta7-12) complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP and AF9 AHD fusion protein 3AQA (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8TLW", "evidence_id": "EV-PDB-8TLW-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.106 }, "provenance": { "deposit_id": "8TLW", "doi": "10.1002/pro.5019", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8TLW" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP and AF9 AHD fusion protein 3AQA in complex with peptidomimetic inhibitor 28" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GSH", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP and AF9 AHD fusion protein 4AQK (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8TLV", "evidence_id": "EV-PDB-8TLV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.659 }, "provenance": { "deposit_id": "8TLV", "doi": "10.1002/pro.5019", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8TLV" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP and AF9 AHD fusion protein 4AQK in complex with peptidomimetic inhibitor 28" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "DMS", "MG", "PGE", "YI7", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein/Induced myeloid leukemia cell differentiation protein Mcl-1 Chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8T6F", "evidence_id": "EV-PDB-8T6F-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.56 }, "provenance": { "deposit_id": "8T6F", "doi": "10.1038/s43018-024-00814-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8T6F" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human MBP-Myeloid cell leukemia 1 (Mcl-1) in complex with BRD810 inhibitor" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains M)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8T2I", "evidence_id": "EV-PDB-8T2I-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 10.4 }, "provenance": { "deposit_id": "8T2I", "doi": "10.1016/j.xplc.2023.100639", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8T2I" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Negative stain EM assembly of MYC, JAZ, and NINJA complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "GOL", "WUC", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein, Induced myeloid leukemia cell differentiation protein Mcl-1 chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8SVY", "evidence_id": "EV-PDB-8SVY-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.47 }, "provenance": { "deposit_id": "8SVY", "doi": "10.1021/acsmedchemlett.3c00141", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8SVY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "MBP-Mcl1 in complex with ligand 10" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Autotransporter protein EspP translocator (chains F)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8SQA", "evidence_id": "EV-PDB-8SQA-6", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.2 }, "provenance": { "deposit_id": "8SQA", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8SQA" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The cryo-EM structure of the EcBAM/EspP(beta8-12) complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "CST complex subunit CTC1 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8SOK", "evidence_id": "EV-PDB-8SOK-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.1 }, "provenance": { "deposit_id": "8SOK", "doi": "10.1016/j.cell.2024.05.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8SOK" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of human CST bound to POT1(ESDL)/TPP1 in the presence of telomeric ssDNA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "CST complex subunit CTC1 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8SOJ", "evidence_id": "EV-PDB-8SOJ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "8SOJ", "doi": "10.1016/j.cell.2024.05.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8SOJ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of human CST bound to POT1(ESDL)/TPP1 in the absence of telomeric ssDNA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "WXW", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8QSO", "evidence_id": "EV-PDB-8QSO-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.106 }, "provenance": { "deposit_id": "8QSO", "doi": "10.1021/acs.jmedchem.3c02206", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8QSO" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of human Mcl-1 in complex with compound 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.4, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Gasdermin-like protein rcd-1-1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8JYX", "evidence_id": "EV-PDB-8JYX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.35 }, "provenance": { "deposit_id": "8JYX", "doi": "10.1126/science.adm9190", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8JYX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the gasdermin-like protein RCD-1-1 from Neurospora crassa" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "V6X" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8JXS", "evidence_id": "EV-PDB-8JXS-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "8JXS", "doi": "10.1016/j.neuron.2024.07.003", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8JXS" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of nanobody-bound DRD1_PF-6142 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "7LD", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8JXR", "evidence_id": "EV-PDB-8JXR-3", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.57 }, "provenance": { "deposit_id": "8JXR", "doi": "10.1016/j.neuron.2024.07.003", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8JXR" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of nanobody-bound DRD1_LSD complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Hemorrhagic toxin (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8JI0", "evidence_id": "EV-PDB-8JI0-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "8JI0", "doi": "10.1038/s41467-024-46394-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8JI0" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the TcsH-CROP in complex with TMPRSS2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein PML (chains A,E)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8J2P", "evidence_id": "EV-PDB-8J2P-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.09 }, "provenance": { "deposit_id": "8J2P", "doi": "10.1158/2159-8290.CD-23-0453", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8J2P" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of PML B-box2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein PML (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8J25", "evidence_id": "EV-PDB-8J25-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "8J25", "doi": "10.1158/2159-8290.CD-23-0453", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8J25" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of PML B-box2 mutant" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,YEATS domain-containing protein 4 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8IIZ", "evidence_id": "EV-PDB-8IIZ-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "8IIZ", "doi": "10.1073/pnas.2304103120", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8IIZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K27ac peptide" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,YEATS domain-containing protein 4 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8IIY", "evidence_id": "EV-PDB-8IIY-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.15 }, "provenance": { "deposit_id": "8IIY", "doi": "10.1073/pnas.2304103120", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8IIY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K14ac peptide" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Tumor necrosis factor receptor superfamily member 1B,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8HLB", "evidence_id": "EV-PDB-8HLB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.63 }, "provenance": { "deposit_id": "8HLB", "doi": "10.1038/s42003-023-05326-8", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8HLB" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of biparatopic antibody Bp109-92 in complex with TNFR2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Pappalysin-1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8HGH", "evidence_id": "EV-PDB-8HGH-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.16 }, "provenance": { "deposit_id": "8HGH", "doi": "10.1038/s41421-022-00502-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8HGH" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of 2:2 PAPP-A.STC2 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EPE", "GLY", "MG", "OGA", "PEG", "TRS", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,DNA N6-methyl adenine demethylase (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8H68", "evidence_id": "EV-PDB-8H68-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.2 }, "provenance": { "deposit_id": "8H68", "doi": "10.1093/jmcb/mjad008", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8H68" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of Caenorhabditis elegans NMAD-1 in complex with NOG and Mg(II)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein (Fragment),OrfB_Zn_ribbon domain-containing protein (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8GKH", "evidence_id": "EV-PDB-8GKH-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "8GKH", "doi": "10.1038/s41586-023-06356-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8GKH" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of the Spizellomyces punctatus Fanzor (SpuFz) in complex with omega RNA and target DNA" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein, phiPA3 PhuN (chains A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c,d,e,f)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8FV5", "evidence_id": "EV-PDB-8FV5-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.21 }, "provenance": { "deposit_id": "8FV5", "doi": "10.1038/s41467-023-36526-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8FV5" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Representation of 16-mer phiPA3 PhuN Lattice, p2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein, PhuN (chains A,B,C,D,E,F,G,H)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8FNE", "evidence_id": "EV-PDB-8FNE-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.9 }, "provenance": { "deposit_id": "8FNE", "doi": "10.1038/s41467-023-36526-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8FNE" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "phiPA3 PhuN Tetramer, p2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Zinc Sensor protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8F23", "evidence_id": "EV-PDB-8F23-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.93 }, "provenance": { "deposit_id": "8F23", "doi": "10.1039/d3sc00437f", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8F23" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The crystal structure of a rationally designed zinc sensor based on maltose binding protein - Apo conformation" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Zinc Sensor protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8ETB", "evidence_id": "EV-PDB-8ETB-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.63 }, "provenance": { "deposit_id": "8ETB", "doi": "10.1039/d3sc00437f", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8ETB" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "the crystal structure of a rationally designed zinc sensor based on maltose binding protein - Zn binding conformation" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "EDO", "EPE", "PEG", "PGE" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltodextrin-binding protein,Putative pilin protein (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8DX4", "evidence_id": "EV-PDB-8DX4-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.487 }, "provenance": { "deposit_id": "8DX4", "doi": "10.1016/j.jbc.2022.102449", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8DX4" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Clostridioides difficile R20291 minor pilin - PilW fused with Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "PEG", "PO4" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Chromatin assembly factor 1 subunit p90 fusion (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8DEI", "evidence_id": "EV-PDB-8DEI-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.81 }, "provenance": { "deposit_id": "8DEI", "doi": "10.7554/eLife.83538", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8DEI" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of the Cac1 KER domain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Type III secretion protein PcrV (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8CRB", "evidence_id": "EV-PDB-8CRB-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.6 }, "provenance": { "deposit_id": "8CRB", "doi": "10.1016/j.cell.2023.10.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8CRB" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of PcrV/Fab(11-E5)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Type III secretion protein PcrV (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8CR9", "evidence_id": "EV-PDB-8CR9-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.2 }, "provenance": { "deposit_id": "8CR9", "doi": "10.1016/j.cell.2023.10.002", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8CR9" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of PcrV/Fab(30-B8)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Apolipoprotein E (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8CE0", "evidence_id": "EV-PDB-8CE0-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.75 }, "provenance": { "deposit_id": "8CE0", "doi": "10.1186/s13024-023-00620-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8CE0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "N-terminal domain of human apolipoprotein E" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein,Apolipoprotein E (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8CDY", "evidence_id": "EV-PDB-8CDY-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "8CDY", "doi": "10.1186/s13024-023-00620-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8CDY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "N-terminal domain of human apolipoprotein E" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PEG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8C8F", "evidence_id": "EV-PDB-8C8F-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.15 }, "provenance": { "deposit_id": "8C8F", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8C8F" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of the E. coli maltodextrin-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Nuclear receptor subfamily 2 group F member 6 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8C5L", "evidence_id": "EV-PDB-8C5L-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.6 }, "provenance": { "deposit_id": "8C5L", "doi": "10.1021/acschembio.5c00475", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8C5L" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "NR2F6 ligand binding domain in complex with NSD1 peptide" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Apolipoprotein E (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8AX9", "evidence_id": "EV-PDB-8AX9-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.549 }, "provenance": { "deposit_id": "8AX9", "doi": "10.1186/s13024-023-00620-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8AX9" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human Apolipoprotein E4 (ApoE4) N-terminal domain (space group P212121)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Apolipoprotein E (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8AX8", "evidence_id": "EV-PDB-8AX8-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.551 }, "provenance": { "deposit_id": "8AX8", "doi": "10.1186/s13024-023-00620-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8AX8" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human Apolipoprotein E4 (ApoE4) N-terminal domain (space group P3121)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACT", "OL0", "PG4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8AX7", "evidence_id": "EV-PDB-8AX7-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.65 }, "provenance": { "deposit_id": "8AX7", "doi": "10.1021/acsmedchemlett.2c00400", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8AX7" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0031448" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "OP9", "PG4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8AX6", "evidence_id": "EV-PDB-8AX6-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.9 }, "provenance": { "deposit_id": "8AX6", "doi": "10.1021/acsmedchemlett.2c00400", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8AX6" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0029882" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "OKU", "PG4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -193.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8AX5", "evidence_id": "EV-PDB-8AX5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.75 }, "provenance": { "deposit_id": "8AX5", "doi": "10.1021/acsmedchemlett.2c00400", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8AX5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0029881" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 4.6, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,TP53-regulated inhibitor of apoptosis 1 (chains B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8AG0", "evidence_id": "EV-PDB-8AG0-2", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.7 }, "provenance": { "deposit_id": "8AG0", "doi": "10.1016/j.bbapap.2022.140867", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8AG0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of mutant PRELID3a-TRIAP1 complex - R53E" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "APR", "MG", "NCA" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,TccC3 (chains F)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7Z7H", "evidence_id": "EV-PDB-7Z7H-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "7Z7H", "doi": "10.1038/s41467-022-31836-w", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7Z7H" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of P. luminescens TccC3-F-actin complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Pappalysin-1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7Y5Q", "evidence_id": "EV-PDB-7Y5Q-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "7Y5Q", "doi": "10.1038/s41421-022-00502-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7Y5Q" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of 1:1 PAPP-A.STC2 complex(half map)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "PEG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Fusion protein of Maltose-binding periplasmic protein and RNA-binding protein KhpA (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7XQC", "evidence_id": "EV-PDB-7XQC-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "7XQC", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7XQC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of N-terminal domain of Rv2908c fused with Maltose Binding Protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MES", "NAG", "NNH", "SO4", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltodextrin-binding protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/7XMN", "evidence_id": "EV-PDB-7XMN-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "7XMN", "doi": "10.1128/spectrum.01234-23", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/7XMN" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of SARS-CoV-2 ORF8" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "MBP and AF9 AHD fusion protein 3AQA (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8TLX", "evidence_id": "EV-PDB-8TLX-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.097 }, "provenance": { "deposit_id": "8TLX", "doi": "10.1002/pro.5019", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8TLX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of MBP and AF9 AHD fusion protein 3AQA in complex with peptidomimetic inhibitor 21a" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "Y70", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,SD40 (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8TNP", "evidence_id": "EV-PDB-8TNP-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.3 }, "provenance": { "deposit_id": "8TNP", "doi": "10.1126/science.adk4422", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8TNP" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of DDB1dB:CRBN:Pomalidomide:SD40" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MIQ", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,SD40 (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8TNQ", "evidence_id": "EV-PDB-8TNQ-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.41 }, "provenance": { "deposit_id": "8TNQ", "doi": "10.1126/science.adk4422", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8TNQ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MIQ", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,SD40 (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8TNR", "evidence_id": "EV-PDB-8TNR-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.5 }, "provenance": { "deposit_id": "8TNR", "doi": "10.1126/science.adk4422", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8TNR" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Transcription factor GATA-4 (chains T)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8VG0", "evidence_id": "EV-PDB-8VG0-7", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.07 }, "provenance": { "deposit_id": "8VG0", "doi": "10.1016/j.molcel.2024.07.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8VG0" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of GATA4 in complex with ALBN1 nucleosome" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein fused to apoptosis regulator Bcl-2/Bcl-xL chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8VWX", "evidence_id": "EV-PDB-8VWX-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.77 }, "provenance": { "deposit_id": "8VWX", "doi": "10.1021/acs.analchem.4c04516", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8VWX" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human Bcl-2 (G101V Mutant)/Bcl-xL Chimera Fused to Maltose-Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "F3Q", "PEG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein fused to apoptosis regulator Bcl-2/Bcl-xL chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8VXM", "evidence_id": "EV-PDB-8VXM-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "8VXM", "doi": "10.1021/acs.analchem.4c04516", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8VXM" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human Bcl-2/Bcl-xL Chimera Fused to MBP in Complex with Inhibitor S55746" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Chromatin modification-related protein EAF6 (chains L)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8X2X", "evidence_id": "EV-PDB-8X2X-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.8 }, "provenance": { "deposit_id": "8X2X", "doi": "10.1073/pnas.2414490122", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8X2X" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The piccolo NuA4 bound to the H2A.Z nucleosome complex at pre-H4-acetylation state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Chromatin modification-related protein EAF6 (chains L)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8X2Y", "evidence_id": "EV-PDB-8X2Y-6", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.1 }, "provenance": { "deposit_id": "8X2Y", "doi": "10.1073/pnas.2414490122", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8X2Y" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The class1 of piccolo NuA4 bound to the H2A.Z nucleosome complex at harboring state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 5 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8X7V", "evidence_id": "EV-PDB-8X7V-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.01 }, "provenance": { "deposit_id": "8X7V", "doi": "10.1038/s41594-024-01396-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8X7V" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of human SCMC ternary complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 5 (chains A,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8X7W", "evidence_id": "EV-PDB-8X7W-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.36 }, "provenance": { "deposit_id": "8X7W", "doi": "10.1038/s41594-024-01396-2", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8X7W" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of dimeric human SCMC complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8YBE", "evidence_id": "EV-PDB-8YBE-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.3 }, "provenance": { "deposit_id": "8YBE", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8YBE" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "GOL" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,N-terminal Bte1 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8ZHS", "evidence_id": "EV-PDB-8ZHS-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.4 }, "provenance": { "deposit_id": "8ZHS", "doi": "10.1016/j.chom.2025.01.008", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8ZHS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Structure of Mbp-Bte1 fusion protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ACH" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Vesicular acetylcholine transporter,DARPinoff7 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8ZMS", "evidence_id": "EV-PDB-8ZMS-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.7 }, "provenance": { "deposit_id": "8ZMS", "doi": "10.1038/s41422-024-00986-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8ZMS" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Acetylcholine-bound VAChT" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "GPR15 (chains R)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8ZQE", "evidence_id": "EV-PDB-8ZQE-5", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.9 }, "provenance": { "deposit_id": "8ZQE", "doi": "10.1038/s41421-024-00698-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8ZQE" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the GPR15L(C11)-bound GPR15 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1ALT", "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9BCG", "evidence_id": "EV-PDB-9BCG-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.898 }, "provenance": { "deposit_id": "9BCG", "doi": "10.1021/acs.jmedchem.4c01188", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9BCG" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Myeloid cell leukemia-1 (Mcl-1) complexed with compound" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "NAG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9BDE", "evidence_id": "EV-PDB-9BDE-4", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.18 }, "provenance": { "deposit_id": "9BDE", "doi": "10.1038/s41586-024-08223-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9BDE" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Middle Region of Apolipoprotein B 100 bound to Low Density Lipoprotein Receptor" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "42H" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "mVenus,Maltose/maltodextrin-binding periplasmic protein,Protein spinster homolog 1,Designed ankyrin repeat protein (DARPin) (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9BOI", "evidence_id": "EV-PDB-9BOI-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.22 }, "provenance": { "deposit_id": "9BOI", "doi": "10.1073/pnas.2409596121", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9BOI" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of human Spns1 in complex with LPC (18:1)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Guillardia theta Fanzor1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CES", "evidence_id": "EV-PDB-9CES-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.28 }, "provenance": { "deposit_id": "9CES", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CES" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Guillardia theta Fanzor (GtFz) State 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Guillardia theta Fanzor1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CET", "evidence_id": "EV-PDB-9CET-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "9CET", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CET" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Guillardia theta Fanzor (GtFz) State 3" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Spizellomyces punctatus Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CEU", "evidence_id": "EV-PDB-9CEU-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.29 }, "provenance": { "deposit_id": "9CEU", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CEU" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Spizellomyces punctatus Fanzor (SpuFz) State 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Spizellomyces punctatus Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CEV", "evidence_id": "EV-PDB-9CEV-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.26 }, "provenance": { "deposit_id": "9CEV", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CEV" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Spizellomyces punctatus Fanzor (SpuFz) State 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Spizellomyces punctatus Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CEW", "evidence_id": "EV-PDB-9CEW-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.88 }, "provenance": { "deposit_id": "9CEW", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CEW" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Spizellomyces punctatus Fanzor (SpuFz) State 3" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Spizellomyces punctatus Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CEY", "evidence_id": "EV-PDB-9CEY-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.22 }, "provenance": { "deposit_id": "9CEY", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CEY" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Spizellomyces punctatus Fanzor (SpuFz) State 5" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Spizellomyces punctatus Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CEZ", "evidence_id": "EV-PDB-9CEZ-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.41 }, "provenance": { "deposit_id": "9CEZ", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CEZ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Spizellomyces punctatus Fanzor (SpuFz) State 6" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Parasitella parasitica Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CF0", "evidence_id": "EV-PDB-9CF0-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.47 }, "provenance": { "deposit_id": "9CF0", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CF0" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Parasitella parasitica Fanzor (PpFz) State 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Parasitella parasitica Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CF1", "evidence_id": "EV-PDB-9CF1-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.52 }, "provenance": { "deposit_id": "9CF1", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CF1" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Parasitella parasitica Fanzor (PpFz) State 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Parasitella parasitica Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CF2", "evidence_id": "EV-PDB-9CF2-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.15 }, "provenance": { "deposit_id": "9CF2", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CF2" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Parasitella parasitica Fanzor (PpFz) State 3" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Parasitella parasitica Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CF3", "evidence_id": "EV-PDB-9CF3-4", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.2 }, "provenance": { "deposit_id": "9CF3", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CF3" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Parasitella parasitica Fanzor (PpFz) State 4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CD", "EDO", "NA", "PEG", "PGE" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CLC", "evidence_id": "EV-PDB-9CLC-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.48 }, "provenance": { "deposit_id": "9CLC", "doi": "10.1002/anie.202421000", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CLC" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of maltose binding protein (Apo), mutant Trp10 to 4-Cyanotryptophan" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CD", "EDO", "NA", "PEG", "PGE" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CLD", "evidence_id": "EV-PDB-9CLD-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 1.58 }, "provenance": { "deposit_id": "9CLD", "doi": "10.1002/anie.202421000", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CLD" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of maltose binding protein (Apo)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "NAG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9COO", "evidence_id": "EV-PDB-9COO-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.73 }, "provenance": { "deposit_id": "9COO", "doi": "10.1038/s41586-024-08223-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9COO" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Nanobody 4 bound to Apolipoprotein B 100" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1A4L", "ADP", "CPS" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 3 chimera (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9DH3", "evidence_id": "EV-PDB-9DH3-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.76 }, "provenance": { "deposit_id": "9DH3", "doi": "10.1038/s44321-024-00181-4", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9DH3" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of NLRP3 complex with Compound C" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A,C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9FGV", "evidence_id": "EV-PDB-9FGV-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.39 }, "provenance": { "deposit_id": "9FGV", "doi": "10.1038/s41589-025-01972-7", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9FGV" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of MBP homo-dimer assembled by homo Di-Gluebody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9FKQ", "evidence_id": "EV-PDB-9FKQ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.45 }, "provenance": { "deposit_id": "9FKQ", "doi": "10.1038/s41589-025-01972-7", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9FKQ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of MBP homo-dimer assembled by homo Di-Gluebody - MBP local refinement" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "6UZ", "A1IHM", "A1IHN", "NAG", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Pro-Macrobody 5,Maltose/maltodextrin-binding periplasmic protein (chains D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9FYQ", "evidence_id": "EV-PDB-9FYQ-3", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.25 }, "provenance": { "deposit_id": "9FYQ", "doi": "10.1038/s41467-025-59545-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9FYQ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of native SV2A in complex with TeNT-Hc, gangliosides and Pro-Macrobody 5" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Bacterial antiviral defense protein Ec1ApeA from Escherichia coli strain NCTC8008 (chains A,B,C,D,E,F,G,H,I,J)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9HXN", "evidence_id": "EV-PDB-9HXN-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.23 }, "provenance": { "deposit_id": "9HXN", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9HXN" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Bacterial antiviral defense protein Ec1ApeA from Escherichia coli strain NCTC8008" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Bacterial antiviral defense protein Ec3ApeA from Escherichia coli strain KK-NP016 (chains A,B,C,D,E,F,G,H,I,J,K,L)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9HXJ", "evidence_id": "EV-PDB-9HXJ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "9HXJ", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9HXJ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Bacterial antiviral defense protein Ec3ApeA from Escherichia coli strain KK-NP016" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "6UZ", "NAG", "UKX", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Pro-Macrobody 5,Maltose/maltodextrin-binding periplasmic protein,Maltose/maltodextrin-binding periplasmic protein (chains D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9FYR", "evidence_id": "EV-PDB-9FYR-3", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.6 }, "provenance": { "deposit_id": "9FYR", "doi": "10.1038/s41467-025-59545-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9FYR" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of native SV2A in complex with TeNT-Hc, Pro-Macrobody 5 and Levetiracetam" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Spizellomyces punctatus Fanzor 1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CEX", "evidence_id": "EV-PDB-9CEX-4", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.27 }, "provenance": { "deposit_id": "9CEX", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CEX" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Spizellomyces punctatus Fanzor (SpuFz) State 4" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Guillardia theta Fanzor1 (chains P)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9CER", "evidence_id": "EV-PDB-9CER-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.7 }, "provenance": { "deposit_id": "9CER", "doi": "10.1016/j.cell.2024.07.050", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9CER" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Guillardia theta Fanzor (GtFz) State 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CA", "NAG", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltodextrin-binding protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9BDT", "evidence_id": "EV-PDB-9BDT-4", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 5.4 }, "provenance": { "deposit_id": "9BDT", "doi": "10.1038/s41586-024-08223-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9BDT" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Apolipoprotein B 100 bound to LDL receptor and legobody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1LWL" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Vesicular acetylcholine transporter,DARPinoff7 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8ZMR", "evidence_id": "EV-PDB-8ZMR-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.5 }, "provenance": { "deposit_id": "8ZMR", "doi": "10.1038/s41422-024-00986-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8ZMR" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Vesamicol-bound VAChT" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "GFP-MBP-solute carrier family 6 member 2 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8XB4", "evidence_id": "EV-PDB-8XB4-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.92 }, "provenance": { "deposit_id": "8XB4", "doi": "10.1038/s41586-024-07810-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8XB4" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of apo state of the human Norepinephrine Transporter" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "YMN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "GFP-MBP-solute carrier family 6 member 2 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8XB3", "evidence_id": "EV-PDB-8XB3-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.8 }, "provenance": { "deposit_id": "8XB3", "doi": "10.1038/s41586-024-07810-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8XB3" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structural mechanism of substrate binding and inhibition of the human Norepinephrine Transporter" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "YNT" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "GFP-MBP-solute carrier family 6 member 2,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8XB2", "evidence_id": "EV-PDB-8XB2-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.04 }, "provenance": { "deposit_id": "8XB2", "doi": "10.1038/s41586-024-07810-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8XB2" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of radafaxine-bound state of the human Norepinephrine Transporter" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 8.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein fused to apoptosis regulator Bcl-2/Bcl-xL chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8VXN", "evidence_id": "EV-PDB-8VXN-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.09 }, "provenance": { "deposit_id": "8VXN", "doi": "10.1021/acs.analchem.4c04516", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8VXN" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human Bcl-2/Bcl-xL Chimera Fused to Maltose-Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "F3Q", "PEG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.5, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein fused to apoptosis regulator Bcl-2/Bcl-xL chimera (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8VWZ", "evidence_id": "EV-PDB-8VWZ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.33 }, "provenance": { "deposit_id": "8VWZ", "doi": "10.1021/acs.analchem.4c04516", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8VWZ" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Human Bcl-2 (G101V Mutant)/Bcl-xL Chimera Fused to MBP in Complex with Inhibitor S55746" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 5.0, "salt_mM": null, "temperature_c": -90.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Mucin-16 (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8VRS", "evidence_id": "EV-PDB-8VRS-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.47 }, "provenance": { "deposit_id": "8VRS", "doi": "10.1186/s13048-024-01373-9", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8VRS" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Mucin 16 peptide fused to MBP in complex with 4H11-scFv antibody" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Transcription factor GATA-4 (chains T)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/8VG1", "evidence_id": "EV-PDB-8VG1-8", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.48 }, "provenance": { "deposit_id": "8VG1", "doi": "10.1016/j.molcel.2024.07.016", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/8VG1" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of FoxA1 and GATA4 in complex with ALBN1 nucleosome" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKU", "evidence_id": "EV-PDB-9SKU-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.06 }, "provenance": { "deposit_id": "9SKU", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKU" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA in reducing conditions, hexamer" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1EF9", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Phosphoprotein (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VUM", "evidence_id": "EV-PDB-9VUM-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.84 }, "provenance": { "deposit_id": "9VUM", "doi": "10.1073/pnas.2522978123", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VUM" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1EF9", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,RNA-directed RNA polymerase L (chains L)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VUM", "evidence_id": "EV-PDB-9VUM-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.84 }, "provenance": { "deposit_id": "9VUM", "doi": "10.1073/pnas.2522978123", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VUM" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Probable G-protein coupled receptor 75,Maltose/maltodextrin-binding periplasmic protein (chains R)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9XQC", "evidence_id": "EV-PDB-9XQC-5", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.0 }, "provenance": { "deposit_id": "9XQC", "doi": "10.1038/s41401-025-01720-6", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9XQC" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "A composite Cryo-EM structure of GPR75" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9XKO", "evidence_id": "EV-PDB-9XKO-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.35 }, "provenance": { "deposit_id": "9XKO", "doi": "10.1038/s41467-026-71934-7", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9XKO" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "High-resolution cryo-EM structure of Maltose Binding Protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Reverse transcriptase domain-containing protein (chains A,B,C,D,E,F)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9WY8", "evidence_id": "EV-PDB-9WY8-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.69 }, "provenance": { "deposit_id": "9WY8", "doi": "10.1016/j.bbrc.2025.152955", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9WY8" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the hexameric DRT6" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "ATP", "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Midnolin (chains f)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9WBG", "evidence_id": "EV-PDB-9WBG-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 4.23 }, "provenance": { "deposit_id": "9WBG", "doi": "10.1038/s41467-026-71002-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9WBG" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1EMK", "CL", "NA" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "GFP,Maltose/maltodextrin-binding periplasmic protein,Sodium- and chloride-dependent betaine transporter (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9W98", "evidence_id": "EV-PDB-9W98-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.71 }, "provenance": { "deposit_id": "9W98", "doi": "10.1038/s41467-026-72924-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9W98" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of ATPCA-bound state of the human betaine/GABA transporter 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1EVN", "CL" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "GFP,Maltose/maltodextrin-binding periplasmic protein,Sodium- and chloride-dependent betaine transporter (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9W97", "evidence_id": "EV-PDB-9W97-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.84 }, "provenance": { "deposit_id": "9W97", "doi": "10.1038/s41467-026-72924-5", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9W97" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of BPDBA-bound state of the human betaine/GABA transporter 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9W3K", "evidence_id": "EV-PDB-9W3K-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.08 }, "provenance": { "deposit_id": "9W3K", "doi": "10.1073/pnas.2534234123", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9W3K" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "GPR151-Legobody complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ADP", "ATP", "MG", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Midnolin (chains f)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9W39", "evidence_id": "EV-PDB-9W39-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.65 }, "provenance": { "deposit_id": "9W39", "doi": "10.1038/s41467-026-71002-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9W39" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl bound" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ITN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Soluble cytochrome b562,2-oxoglutarate receptor 1,Soluble cytochrome b562,2-oxoglutarate receptor 1,Soluble cytochrome b562,2-oxoglutarate receptor 1,Fusion protein,Maltose/maltodextrin-binding periplasmic protein,Maltose/maltodextrin-binding periplasmic protein,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VV6", "evidence_id": "EV-PDB-9VV6-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.62 }, "provenance": { "deposit_id": "9VV6", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VV6" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The structure of ITN bound OXGR1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "AKG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Soluble cytochrome b562,2-oxoglutarate receptor 1,Soluble cytochrome b562,2-oxoglutarate receptor 1,Soluble cytochrome b562,2-oxoglutarate receptor 1,Fusion protein,Maltose/maltodextrin-binding periplasmic protein,Maltose/maltodextrin-binding periplasmic protein,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VUS", "evidence_id": "EV-PDB-9VUS-5", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.37 }, "provenance": { "deposit_id": "9VUS", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VUS" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "The structure of akg bound OXGR1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1EF9", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,RNA-directed RNA polymerase L,Strep II and FLAG tag (chains L)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VUL", "evidence_id": "EV-PDB-9VUL-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.13 }, "provenance": { "deposit_id": "9VUL", "doi": "10.1073/pnas.2522978123", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VUL" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "A1EF9", "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Phosphoprotein (chains A,B,C,D)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VUL", "evidence_id": "EV-PDB-9VUL-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.13 }, "provenance": { "deposit_id": "9VUL", "doi": "10.1073/pnas.2522978123", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VUL" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "NAG", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose", "branched: beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Leucine-rich repeat receptor protein kinase HPCA1,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VBV", "evidence_id": "EV-PDB-9VBV-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.61 }, "provenance": { "deposit_id": "9VBV", "doi": "10.1038/s41467-026-72573-8", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VBV" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of a CARD1 ectodomain H197A/H199A/H222A mutant" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "CU", "NAG", "branched: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose", "branched: beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Leucine-rich repeat receptor protein kinase HPCA1,Maltose/maltodextrin-binding periplasmic protein (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9VBD", "evidence_id": "EV-PDB-9VBD-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.26 }, "provenance": { "deposit_id": "9VBD", "doi": "10.1038/s41467-026-72573-8", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9VBD" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of CARD1 ectodomain" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.4, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Bacteroides fragilis T6SS effector (chains A,B)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9UU0", "evidence_id": "EV-PDB-9UU0-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.72 }, "provenance": { "deposit_id": "9UU0", "doi": "10.1073/pnas.2513207122", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9UU0" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The structure of Bacteroides fragilis T6SS effector BteO" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "branched: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Egalitarian, isoform B (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9UJY", "evidence_id": "EV-PDB-9UJY-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.26 }, "provenance": { "deposit_id": "9UJY", "doi": "10.1101/2025.08.03.668247", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9UJY" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "The structure of Egalitarian in complex with the K10 mRNA localization signal reveals a modular binding surface required for function" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Protein E6 (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9U4D", "evidence_id": "EV-PDB-9U4D-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.39 }, "provenance": { "deposit_id": "9U4D", "doi": null, "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9U4D" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of UBE3A-E6-p53 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Nuclear autoantigen Sp-100 (chains A,AA,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,V,W,X,Y,Z)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9TNZ", "evidence_id": "EV-PDB-9TNZ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.52 }, "provenance": { "deposit_id": "9TNZ", "doi": "10.1038/s41556-026-01916-w", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9TNZ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "SP100 CARD filament" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Zinc finger CCCH domain-containing protein 18 (chains C)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9T3X", "evidence_id": "EV-PDB-9T3X-3", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.1 }, "provenance": { "deposit_id": "9T3X", "doi": "10.1093/nar/gkag088", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9T3X" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "cryo-EM structure of CPSF160-WDR33-ZC3H18" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKZ", "evidence_id": "EV-PDB-9SKZ-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.22 }, "provenance": { "deposit_id": "9SKZ", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKZ" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA C283A/C284A inactive mutant, dimer, state 2" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKY", "evidence_id": "EV-PDB-9SKY-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.18 }, "provenance": { "deposit_id": "9SKY", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKY" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA C283A/C284A inactive mutant, dimer, state 1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKX", "evidence_id": "EV-PDB-9SKX-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.08 }, "provenance": { "deposit_id": "9SKX", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKX" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA C283A/C284A inactive mutant, hexamer" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKW", "evidence_id": "EV-PDB-9SKW-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.27 }, "provenance": { "deposit_id": "9SKW", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKW" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA in reducing conditions, dimer, minor state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKV", "evidence_id": "EV-PDB-9SKV-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.12 }, "provenance": { "deposit_id": "9SKV", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKV" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA in reducing conditions, dimer, major state, inactive conformation" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKT", "evidence_id": "EV-PDB-9SKT-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.45 }, "provenance": { "deposit_id": "9SKT", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKT" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA in oxidizing conditions, dimer, minor state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKS", "evidence_id": "EV-PDB-9SKS-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.15 }, "provenance": { "deposit_id": "9SKS", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKS" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA in oxidizing conditions, dimer, major state, active conformation" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "ZN" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Carboxysome shell carbonic anhydrase (chains A,B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9SKR", "evidence_id": "EV-PDB-9SKR-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 2.13 }, "provenance": { "deposit_id": "9SKR", "doi": "10.64898/2026.04.02.716132", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9SKR" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Cryo-EM structure of H. neapolitanus CsoSCA in oxidizing conditions, hexamer" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "SO4", "branched: alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 6.0, "salt_mM": null, "temperature_c": -173.15 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,Triggering receptor expressed on myeloid cells 2 (chains A)", "labels": [] }, "data_format": "mmCIF + structure factors", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9PX5", "evidence_id": "EV-PDB-9PX5-1", "mappings": [ { "confidence": "medium", "justification": "Linear alpha-1,4 maltodextrin bound (branched entity); maltose and maltodextrins close MBP.", "rule": "mbp-maltodextrin-closed", "state_id": "MBP-closed-maltose", "who": "rule:mbp-maltodextrin-closed" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.7 }, "provenance": { "deposit_id": "9PX5", "doi": "10.1080/19420862.2025.2546554", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9PX5" }, "reader": null, "source_kind": "deposit", "technique": "xray", "title": "Crystal structure of Fab 7268 in complex with MBP-TREM2 Ig domain fusion" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "Maltose/maltodextrin ABC transporter substrate-binding protein MalE (chains A)", "labels": [] }, "data_format": "mmCIF + NMR restraints", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9PGN", "evidence_id": "EV-PDB-9PGN-1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "structure", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "9PGN", "doi": "10.1002/pro.70425", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9PGN" }, "reader": null, "source_kind": "deposit", "technique": "nmr_structure", "title": "Two-conformer equilibrium of maltose-binding protein in the absence of ligand from residual dipolar coupling analysis" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [ "BGC", "CA", "FUC", "MG" ], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Tissue factor,Maltose/maltodextrin-binding periplasmic protein (chains T)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9P0X", "evidence_id": "EV-PDB-9P0X-4", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.7 }, "provenance": { "deposit_id": "9P0X", "doi": "10.1182/blood.2025029430", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9P0X" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (nanodisc-subtracted)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,E3 ubiquitin-protein ligase UHRF1 (chains B)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9LN6", "evidence_id": "EV-PDB-9LN6-2", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.49 }, "provenance": { "deposit_id": "9LN6", "doi": "10.1038/s41467-026-71519-4", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9LN6" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of human NLRP14-UHRF1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "Entry-level ligand list; oligosaccharides appear as branched entities. pH and temperature are null when not deposited in machine-readable fields.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 14 (chains A)", "labels": [] }, "data_format": "mmCIF + EMDB map", "data_level": "processed", "data_link": "https://www.rcsb.org/structure/9LN6", "evidence_id": "EV-PDB-9LN6-1", "mappings": [ { "confidence": "low", "justification": "Structure with no maltodextrin bound; MBP is open without sugar. Many entries are MBP fusions, so low.", "rule": "mbp-sugar-free-open", "state_id": "MBP-open-apo", "who": "rule:mbp-sugar-free-open" } ], "molecule_id": "P0AEX9", "observable": { "type": "resolution", "uncertainty": null, "unit": "Å", "value": 3.49 }, "provenance": { "deposit_id": "9LN6", "doi": "10.1038/s41467-026-71519-4", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://www.rcsb.org/structure/9LN6" }, "reader": null, "source_kind": "deposit", "technique": "cryoem", "title": "Structure of human NLRP14-UHRF1 complex" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "BMRB data: 13C chemical shifts, 1H chemical shifts, 15N chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=25237", "evidence_id": "EV-BMRB-25237", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr25237", "doi": "10.13018/BMR25237", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=25237" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "Solution NMR Structure of Maltose-binding protein from Escherichia coli, Northeast Structural Genomics Consortium (NESG) Target ER690" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": 7.0, "salt_mM": null, "temperature_c": 21.85 }, "construct": { "description": "BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=36181", "evidence_id": "EV-BMRB-36181", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr36181", "doi": "10.13018/BMR36181", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=36181" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "Solution structure of peptidyl-prolyl cis/trans isomerase domain of Trigger Factor in complex with MBP" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=4354", "evidence_id": "EV-BMRB-4354", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr4354", "doi": "10.13018/BMR4354", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=4354" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "Solution NMR Studies of a 42kDa Escherichia coli Maltose Binding Protein/ Beta-Cyclodextrin Complex: Chemical Shift Assignments and Analysis" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "BMRB data: 1H chemical shifts, 13C chemical shifts, 15N chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=4986", "evidence_id": "EV-BMRB-4986", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr4986", "doi": "10.13018/BMR4986", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=4986" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "Backbone 1H,13C and 15N chemical shift assignment for the ligand-free state of maltodextrin-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=4987", "evidence_id": "EV-BMRB-4987", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr4987", "doi": "10.13018/BMR4987", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=4987" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "Backbone 1H,13C and 15N chemical shift assignment for the maltotriose-bound state of 2H,13C,15N-labeled maltodextrin-binding protein" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": 7.5, "salt_mM": null, "temperature_c": 16.85 }, "construct": { "description": "BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=50089", "evidence_id": "EV-BMRB-50089", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr50089", "doi": "10.13018/BMR50089", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=50089" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "MBP in the solid state" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": 7.2, "salt_mM": null, "temperature_c": 36.85 }, "construct": { "description": "BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=6807", "evidence_id": "EV-BMRB-6807", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr6807", "doi": "10.13018/BMR6807", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=6807" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "1H, 13C, and 15N chemical shift assignments for stereo-array isotope labelled (SAIL) maltodextrin-binding protein (MBP)" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_vitro", "ions": [], "ligands": [], "notes": "From the first sample condition list of the entry.", "ph": null, "salt_mM": null, "temperature_c": 29.85 }, "construct": { "description": "BMRB data: 13C chemical shifts, 15N chemical shifts, 1H chemical shifts", "labels": [] }, "data_format": "NMR-STAR", "data_level": "processed", "data_link": "https://bmrb.io/data_library/summary/index.php?bmrbId=7114", "evidence_id": "EV-BMRB-7114", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "chemical_shift", "uncertainty": null, "unit": null, "value": null }, "provenance": { "deposit_id": "bmr7114", "doi": "10.13018/BMR7114", "licence": "CC0 1.0 (verify)", "retrieved": "2026-10-19", "source": "BMRB", "url": "https://bmrb.io/data_library/summary/index.php?bmrbId=7114" }, "reader": null, "source_kind": "deposit", "technique": "nmr_shifts", "title": "1H, 13C, and 15N chemical shift assignment of Escherichia coli Maltose Binding Protein complexed with Beta-Cyclodextrin" }, { "conditions": { "applied_force_pn": null, "buffer": "20 mM Na/KPO4 pH 7.0, 300 mM NaCl, 1 mM DTT", "environment": "in_vitro", "ions": [], "ligands": [ "partner: Survival motor neuron protein" ], "notes": "Other molecules in the sample are listed as partners; Rg is of the whole sample. Dmax 11.3 nm.", "ph": 7.0, "salt_mM": null, "temperature_c": 4.0 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein with Survival motor neuron protein", "labels": [] }, "data_format": "scattering curve", "data_level": "processed", "data_link": "https://www.sasbdb.org/data/SASDL75/", "evidence_id": "EV-SASBDB-SASDL75", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "radius_of_gyration", "uncertainty": 0.373, "unit": "nm", "value": 3.909 }, "provenance": { "deposit_id": "SASDL75", "doi": "10.1093/nar/gkab508", "licence": "CC BY 4.0 (verify)", "retrieved": "2026-10-19", "source": "SASBDB", "url": "https://www.sasbdb.org/data/SASDL75/" }, "reader": null, "source_kind": "deposit", "technique": "saxs_sans", "title": "Assembly of higher-order SMN oligomers is essential for metazoan viability and requires an exposed structural motif present in the YG zipper dimer." }, { "conditions": { "applied_force_pn": null, "buffer": "20 mM Na/KPO4 pH 7.0, 300 mM NaCl, 1 mM DTT", "environment": "in_vitro", "ions": [], "ligands": [ "partner: Survival motor neuron protein" ], "notes": "Other molecules in the sample are listed as partners; Rg is of the whole sample. Dmax 17.9 nm.", "ph": 7.0, "salt_mM": null, "temperature_c": 4.0 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein with Survival motor neuron protein", "labels": [] }, "data_format": "scattering curve", "data_level": "processed", "data_link": "https://www.sasbdb.org/data/SASDL85/", "evidence_id": "EV-SASBDB-SASDL85", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "radius_of_gyration", "uncertainty": 0.599, "unit": "nm", "value": 5.577 }, "provenance": { "deposit_id": "SASDL85", "doi": "10.1093/nar/gkab508", "licence": "CC BY 4.0 (verify)", "retrieved": "2026-10-19", "source": "SASBDB", "url": "https://www.sasbdb.org/data/SASDL85/" }, "reader": null, "source_kind": "deposit", "technique": "saxs_sans", "title": "Assembly of higher-order SMN oligomers is essential for metazoan viability and requires an exposed structural motif present in the YG zipper dimer." }, { "conditions": { "applied_force_pn": null, "buffer": "50 mM Tris pH 7.5, 150 mM NaCl", "environment": "in_vitro", "ions": [], "ligands": [ "partner: Uncharacterized protein Rv2242" ], "notes": "Other molecules in the sample are listed as partners; Rg is of the whole sample. Dmax 8.45 nm.", "ph": null, "salt_mM": null, "temperature_c": 20.0 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (D108A, K109A, E198A, N199A, K265A) with Uncharacterized protein Rv2242", "labels": [] }, "data_format": "scattering curve", "data_level": "processed", "data_link": "https://www.sasbdb.org/data/SASDU88/", "evidence_id": "EV-SASBDB-SASDU88", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "radius_of_gyration", "uncertainty": 0.835, "unit": "nm", "value": 2.8 }, "provenance": { "deposit_id": "SASDU88", "doi": "10.1016/j.heliyon.2024.e40494", "licence": "CC BY 4.0 (verify)", "retrieved": "2026-10-19", "source": "SASBDB", "url": "https://www.sasbdb.org/data/SASDU88/" }, "reader": null, "source_kind": "deposit", "technique": "saxs_sans", "title": "Domain architecture of the Mycobacterium tuberculosis MabR (Rv2242), a member of the PucR transcription factor family" }, { "conditions": { "applied_force_pn": null, "buffer": "50 mM Tris pH 7.5, 150 mM NaCl", "environment": "in_vitro", "ions": [], "ligands": [ "partner: Uncharacterized protein Rv2242" ], "notes": "Other molecules in the sample are listed as partners; Rg is of the whole sample. Dmax 10.77 nm.", "ph": null, "salt_mM": null, "temperature_c": 20.0 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (D108A, K109A, E198A, N199A, K265A) with Uncharacterized protein Rv2242", "labels": [] }, "data_format": "scattering curve", "data_level": "processed", "data_link": "https://www.sasbdb.org/data/SASDU98/", "evidence_id": "EV-SASBDB-SASDU98", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "radius_of_gyration", "uncertainty": 0.796, "unit": "nm", "value": 3.7 }, "provenance": { "deposit_id": "SASDU98", "doi": "10.1016/j.heliyon.2024.e40494", "licence": "CC BY 4.0 (verify)", "retrieved": "2026-10-19", "source": "SASBDB", "url": "https://www.sasbdb.org/data/SASDU98/" }, "reader": null, "source_kind": "deposit", "technique": "saxs_sans", "title": "Domain architecture of the Mycobacterium tuberculosis MabR (Rv2242), a member of the PucR transcription factor family" }, { "conditions": { "applied_force_pn": null, "buffer": "50 mM Tris pH 7.5, 150 mM NaCl", "environment": "in_vitro", "ions": [], "ligands": [ "partner: Uncharacterized protein Rv2242" ], "notes": "Other molecules in the sample are listed as partners; Rg is of the whole sample. Dmax 15.79 nm.", "ph": null, "salt_mM": null, "temperature_c": 20.0 }, "construct": { "description": "Maltose/maltodextrin-binding periplasmic protein (D108A, K109A, E198A, N199A, K265A) with Uncharacterized protein Rv2242", "labels": [] }, "data_format": "scattering curve", "data_level": "processed", "data_link": "https://www.sasbdb.org/data/SASDUA8/", "evidence_id": "EV-SASBDB-SASDUA8", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "radius_of_gyration", "uncertainty": 1.844, "unit": "nm", "value": 5.185 }, "provenance": { "deposit_id": "SASDUA8", "doi": "10.1016/j.heliyon.2024.e40494", "licence": "CC BY 4.0 (verify)", "retrieved": "2026-10-19", "source": "SASBDB", "url": "https://www.sasbdb.org/data/SASDUA8/" }, "reader": null, "source_kind": "deposit", "technique": "saxs_sans", "title": "Domain architecture of the Mycobacterium tuberculosis MabR (Rv2242), a member of the PucR transcription factor family" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_silico", "ions": [], "ligands": [], "notes": "Computed prediction; no experimental conditions.", "ph": null, "salt_mM": null, "temperature_c": null }, "construct": { "description": "AlphaFold Monomer v2.0 pipeline, residues 1-396", "labels": [] }, "data_format": "mmCIF, PAE JSON", "data_level": "processed", "data_link": "https://alphafold.ebi.ac.uk/entry/P0AEX9", "evidence_id": "EV-AFDB-AF-P0AEX9-F1", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "plddt", "uncertainty": null, "unit": "pLDDT", "value": 94.25 }, "provenance": { "deposit_id": "AF-P0AEX9-F1", "doi": null, "licence": "CC BY 4.0", "retrieved": "2026-10-19", "source": "AlphaFold DB", "url": "https://alphafold.ebi.ac.uk/entry/P0AEX9" }, "reader": null, "source_kind": "computed", "technique": "af_prediction", "title": "AlphaFold DB prediction AF-P0AEX9-F1" }, { "conditions": { "applied_force_pn": null, "buffer": null, "environment": "in_silico", "ions": [], "ligands": [], "notes": "Simulation; temperature is the thermostat setting.", "ph": null, "salt_mM": null, "temperature_c": 26.85 }, "construct": { "description": "start 3MBP; Amber Parm99", "labels": [] }, "data_format": "trajectory", "data_level": "processed", "data_link": "https://mmb.mddbr.eu/#/id/A00Q4/overview", "evidence_id": "EV-MDDB-A00Q4", "mappings": [], "molecule_id": "P0AEX9", "observable": { "type": "trajectory", "uncertainty": null, "unit": "ns", "value": 10.0 }, "provenance": { "deposit_id": "A00Q4", "doi": "10.1016/j.str.2010.07.013", "licence": "This trajectory dataset is released under a Creative Commons Attribution 4.0 International Public License", "retrieved": "2026-10-19", "source": "MDDB", "url": "https://mmb.mddbr.eu/#/id/A00Q4/overview" }, "reader": null, "source_kind": "computed", "technique": "md", "title": "MoDEL 3MBP" } ], "models": [ { "assumptions": null, "basis": "observed", "constraints_used": [ "EV-PDB-1JW4-1" ], "file": "models/P0AEX9/MBP-open-apo.cif", "format": "mmCIF", "model_id": "MBP-open-apo-cif", "molecule_id": "P0AEX9", "provenance": { "deposit_id": "1JW4", "doi": "10.1021/bi015784n", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://files.rcsb.org/download/1JW4.cif" }, "state_id": "MBP-open-apo" }, { "assumptions": null, "basis": "observed", "constraints_used": [ "EV-PDB-1JW4-1" ], "file": "models/P0AEX9/MBP-open-apo.pdb", "format": "PDB", "model_id": "MBP-open-apo-pdb", "molecule_id": "P0AEX9", "provenance": { "deposit_id": "1JW4", "doi": "10.1021/bi015784n", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://files.rcsb.org/download/1JW4.pdb" }, "state_id": "MBP-open-apo" }, { "assumptions": null, "basis": "observed", "constraints_used": [ "EV-PDB-1ANF-1" ], "file": "models/P0AEX9/MBP-closed-maltose.cif", "format": "mmCIF", "model_id": "MBP-closed-maltose-cif", "molecule_id": "P0AEX9", "provenance": { "deposit_id": "1ANF", "doi": "10.1016/S0969-2126(97)00253-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://files.rcsb.org/download/1ANF.cif" }, "state_id": "MBP-closed-maltose" }, { "assumptions": null, "basis": "observed", "constraints_used": [ "EV-PDB-1ANF-1" ], "file": "models/P0AEX9/MBP-closed-maltose.pdb", "format": "PDB", "model_id": "MBP-closed-maltose-pdb", "molecule_id": "P0AEX9", "provenance": { "deposit_id": "1ANF", "doi": "10.1016/S0969-2126(97)00253-0", "licence": "CC0 1.0 (wwPDB archive data)", "retrieved": "2026-10-19", "source": "RCSB PDB", "url": "https://files.rcsb.org/download/1ANF.pdb" }, "state_id": "MBP-closed-maltose" } ], "molecule": { "components": [], "domains": [], "gene": "malE", "identifiers": { "genbank": null, "isoform": null, "nakb": null, "pdb": [], "rfam": null, "rnacentral": null, "uniprot": "P0AEX9" }, "ligands": [], "modifications": [], "molecule_id": "P0AEX9", "molecule_type": "protein", "name": "Maltose/maltodextrin-binding periplasmic protein", "organism": { "name": "Escherichia coli (strain K12)", "taxon_id": 83333 }, "provenance": { "deposit_id": "P0AEX9", "doi": null, "licence": "CC BY 4.0 (UniProt)", "retrieved": "2026-10-19", "source": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0AEX9/entry" }, "sequence": "MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK", "sequence_length": 396 }, "molecule_id": "P0AEX9", "states": [ { "assumptions": [], "basis": "observed", "description": "Ligand-free open form, as in 1JW4.", "family_label": null, "molecule_id": "P0AEX9", "name": "open, ligand-free", "parent_state": null, "population": null, "provenance": { "deposit_id": null, "doi": null, "licence": "Project licence (pending decision)", "retrieved": "2026-10-19", "source": "Conformome curation (P0AEX9.yaml)", "url": "https://github.com/matth55/conformome/blob/HEAD/curation/P0AEX9.yaml" }, "representative_model": "MBP-open-apo-cif", "secondary_structure": null, "state_id": "MBP-open-apo", "status": "draft" }, { "assumptions": [], "basis": "observed", "description": "Closed form with maltose bound, as in 1ANF.", "family_label": null, "molecule_id": "P0AEX9", "name": "closed, maltose-bound", "parent_state": null, "population": null, "provenance": { "deposit_id": null, "doi": null, "licence": "Project licence (pending decision)", "retrieved": "2026-10-19", "source": "Conformome curation (P0AEX9.yaml)", "url": "https://github.com/matth55/conformome/blob/HEAD/curation/P0AEX9.yaml" }, "representative_model": "MBP-closed-maltose-cif", "secondary_structure": null, "state_id": "MBP-closed-maltose", "status": "draft" } ], "transitions": [] }